RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 FAM98CQ17RN3 349 aaKnown RBP17.18■□□□□ 0.34
HERC3-207ENST00000452979 DCAF11Q8TEB1 546 aa17.17■□□□□ 0.34
HERC3-207ENST00000452979 SPATA31A5Q5VU36 1347 aa17.17■□□□□ 0.34
HERC3-207ENST00000452979 SPATA31A7Q8IWB4 1347 aa17.17■□□□□ 0.34
HERC3-207ENST00000452979 BAG6P46379 1132 aa17.16■□□□□ 0.34
HERC3-207ENST00000452979 RGPD1P0DJD0 1748 aa17.16■□□□□ 0.34
HERC3-207ENST00000452979 NGDNQ8NEJ9 315 aaKnown RBP17.15■□□□□ 0.34
HERC3-207ENST00000452979 KDM2AQ9Y2K7 1162 aa17.15■□□□□ 0.34
HERC3-207ENST00000452979 ITSN1Q15811 1721 aa17.15■□□□□ 0.34
HERC3-207ENST00000452979 THSD7AQ9UPZ6 1657 aa17.14■□□□□ 0.33
HERC3-207ENST00000452979 ARHGEF28Q8N1W1 1705 aaKnown RBP17.13■□□□□ 0.33
HERC3-207ENST00000452979 A0A0G2JS52 829 aa17.13■□□□□ 0.33
HERC3-207ENST00000452979 MYT1Q01538 1121 aa17.13■□□□□ 0.33
HERC3-207ENST00000452979 HRCP23327 699 aa17.12■□□□□ 0.33
HERC3-207ENST00000452979 NUDT16Q96DE0 195 aaKnown RBP17.12■□□□□ 0.33
HERC3-207ENST00000452979 PAK3O75914 559 aaPredicted RBP17.11■□□□□ 0.33
HERC3-207ENST00000452979 ATP7BP35670 1465 aa17.11■□□□□ 0.33
HERC3-207ENST00000452979 EN1Q05925 392 aaPredicted RBP17.1■□□□□ 0.33
HERC3-207ENST00000452979 PRDM11Q9NQV5 511 aa17.1■□□□□ 0.33
HERC3-207ENST00000452979 DISP2A7MBM2 1401 aa17.1■□□□□ 0.33
HERC3-207ENST00000452979 PHRF1Q9P1Y6 1649 aaKnown RBP17.1■□□□□ 0.33
HERC3-207ENST00000452979 TNS1Q9HBL0 1735 aaKnown RBP17.1■□□□□ 0.33
HERC3-207ENST00000452979 PSDA5PKW4 1024 aaPredicted RBP17.09■□□□□ 0.33
HERC3-207ENST00000452979 FAM182BQ5T319 152 aa17.09■□□□□ 0.33
HERC3-207ENST00000452979 SPATA31A1Q5TZJ5 1347 aa17.09■□□□□ 0.33
HERC3-207ENST00000452979 POLR3AO14802 1390 aaPredicted RBP17.08■□□□□ 0.32
HERC3-207ENST00000452979 KIAA0232Q92628 1395 aa17.08■□□□□ 0.32
HERC3-207ENST00000452979 CDK19Q9BWU1 502 aa17.07■□□□□ 0.32
HERC3-207ENST00000452979 KIAA1210Q9ULL0 1709 aa17.07■□□□□ 0.32
HERC3-207ENST00000452979 TOPAZ1Q8N9V7 1692 aa17.07■□□□□ 0.32
HERC3-207ENST00000452979 PLEKHG3A1L390 1219 aa17.05■□□□□ 0.32
HERC3-207ENST00000452979 NBPF8Q3BBV2 869 aa17.05■□□□□ 0.32
HERC3-207ENST00000452979 FAM196AQ6ZSG2 479 aa17.05■□□□□ 0.32
HERC3-207ENST00000452979 CCDC61Q9Y6R9 512 aa17.05■□□□□ 0.32
HERC3-207ENST00000452979 ACEP12821 1306 aa17.04■□□□□ 0.32
HERC3-207ENST00000452979 CHRNA2Q15822 529 aa17.04■□□□□ 0.32
HERC3-207ENST00000452979 CAMKK2Q96RR4 588 aa17.04■□□□□ 0.32
HERC3-207ENST00000452979 ZC3H6P61129 1189 aaKnown RBP17.03■□□□□ 0.32
HERC3-207ENST00000452979 EZH2Q15910 746 aaKnown RBP17.03■□□□□ 0.32
HERC3-207ENST00000452979 BARGINQ6ZT62 677 aa17.03■□□□□ 0.32
HERC3-207ENST00000452979 R3HDM1Q15032 1099 aaKnown RBP17.02■□□□□ 0.32
HERC3-207ENST00000452979 STRN4Q9NRL3 753 aa17.02■□□□□ 0.32
HERC3-207ENST00000452979 PARD3Q8TEW0 1356 aa17.02■□□□□ 0.31
HERC3-207ENST00000452979 TRIM37O94972 964 aa17.01■□□□□ 0.31
HERC3-207ENST00000452979 NUTM2GQ5VZR2 741 aa17.01■□□□□ 0.31
HERC3-207ENST00000452979 SSH2Q76I76 1423 aa17.01■□□□□ 0.31
HERC3-207ENST00000452979 NRKQ7Z2Y5 1582 aa17.01■□□□□ 0.31
HERC3-207ENST00000452979 CPDO75976 1380 aa17.01■□□□□ 0.31
HERC3-207ENST00000452979 LMO7Q8WWI1 1683 aa17.01■□□□□ 0.31
HERC3-207ENST00000452979 CAMTA1Q9Y6Y1 1673 aa17.01■□□□□ 0.31
HERC3-207ENST00000452979 EVA1CP58658 441 aa17■□□□□ 0.31
HERC3-207ENST00000452979 ABTB2Q8N961 1025 aa17■□□□□ 0.31
HERC3-207ENST00000452979 USP19O94966 1318 aa16.98■□□□□ 0.31
HERC3-207ENST00000452979 APBA3O96018 575 aa16.98■□□□□ 0.31
HERC3-207ENST00000452979 RREB1Q92766 1687 aa16.97■□□□□ 0.31
HERC3-207ENST00000452979 PDE3BQ13370 1112 aa16.97■□□□□ 0.31
HERC3-207ENST00000452979 LARP1Q6PKG0 1096 aaKnown RBP16.97■□□□□ 0.31
HERC3-207ENST00000452979 USP35Q9P2H5 1018 aa16.97■□□□□ 0.31
HERC3-207ENST00000452979 THRAP3Q9Y2W1 955 aaKnown RBP16.97■□□□□ 0.31
HERC3-207ENST00000452979 NBPF1Q3BBV0 1214 aa16.96■□□□□ 0.31
HERC3-207ENST00000452979 NLRP13Q86W25 1043 aa16.96■□□□□ 0.31
HERC3-207ENST00000452979 TCP11L2Q8N4U5 519 aa16.96■□□□□ 0.31
HERC3-207ENST00000452979 BRD4O60885 1362 aaPredicted RBP16.96■□□□□ 0.31
HERC3-207ENST00000452979 GCP02774 474 aa16.95■□□□□ 0.3
HERC3-207ENST00000452979 PARP4Q9UKK3 1724 aaKnown RBP16.95■□□□□ 0.3
HERC3-207ENST00000452979 PPIP5K1Q6PFW1 1433 aa16.95■□□□□ 0.3
HERC3-207ENST00000452979 NUP188Q5SRE5 1749 aa16.94■□□□□ 0.3
HERC3-207ENST00000452979 COL5A2P05997 1499 aaPredicted RBP16.93■□□□□ 0.3
HERC3-207ENST00000452979 C11orf95C9JLR9 678 aaPredicted RBP16.92■□□□□ 0.3
HERC3-207ENST00000452979 SRPK2P78362 688 aaKnown RBP16.92■□□□□ 0.3
HERC3-207ENST00000452979 CENPJQ9HC77 1338 aaPredicted RBP16.92■□□□□ 0.3
HERC3-207ENST00000452979 CABP2Q9NPB3 220 aa16.91■□□□□ 0.3
HERC3-207ENST00000452979 CRB1P82279 1406 aa16.9■□□□□ 0.3
HERC3-207ENST00000452979 NBPF14Q5TI25 921 aa16.9■□□□□ 0.3
HERC3-207ENST00000452979 QRICH2Q9H0J4 1663 aa16.9■□□□□ 0.3
HERC3-207ENST00000452979 PEAK1Q9H792 1746 aa16.9■□□□□ 0.3
HERC3-207ENST00000452979 SLIT3O75094 1523 aa16.89■□□□□ 0.29
HERC3-207ENST00000452979 COL18A1P39060 1754 aa16.89■□□□□ 0.29
HERC3-207ENST00000452979 SBF2Q86WG5 1849 aa16.89■□□□□ 0.29
HERC3-207ENST00000452979 AATKQ6ZMQ8 1374 aa16.89■□□□□ 0.29
HERC3-207ENST00000452979 USP6P35125 1406 aa16.88■□□□□ 0.29
HERC3-207ENST00000452979 CABP1Q9NZU7 370 aa16.88■□□□□ 0.29
HERC3-207ENST00000452979 RGPD3A6NKT7 1758 aaPredicted RBP16.87■□□□□ 0.29
HERC3-207ENST00000452979 RGPD4Q7Z3J3 1758 aa16.87■□□□□ 0.29
HERC3-207ENST00000452979 NLRP6P59044 892 aa16.87■□□□□ 0.29
HERC3-207ENST00000452979 PLSCR1O15162 318 aa16.86■□□□□ 0.29
HERC3-207ENST00000452979 PIK3C2AO00443 1686 aa16.85■□□□□ 0.29
HERC3-207ENST00000452979 OVOS2A0A0G2JMS6 1433 aa16.85■□□□□ 0.29
HERC3-207ENST00000452979 OVOS2A0A0J9YW53 1432 aa16.85■□□□□ 0.29
HERC3-207ENST00000452979 OVOS2Q6IE36 1432 aa16.85■□□□□ 0.29
HERC3-207ENST00000452979 LRRC37A3O60309 1634 aa16.85■□□□□ 0.29
HERC3-207ENST00000452979 WNK3Q9BYP7 1800 aa16.84■□□□□ 0.29
HERC3-207ENST00000452979 DDB1Q16531 1140 aa16.83■□□□□ 0.28
HERC3-207ENST00000452979 EVC2Q86UK5 1308 aa16.82■□□□□ 0.28
HERC3-207ENST00000452979 KCNQ2O43526 872 aa16.82■□□□□ 0.28
HERC3-207ENST00000452979 TOM1L2Q6ZVM7 507 aa16.82■□□□□ 0.28
HERC3-207ENST00000452979 ZNF692Q9BU19 519 aaPredicted RBP16.82■□□□□ 0.28
HERC3-207ENST00000452979 SPON1Q9HCB6 807 aa16.82■□□□□ 0.28
HERC3-207ENST00000452979 AXIN2Q9Y2T1 843 aa16.82■□□□□ 0.28
HERC3-207ENST00000452979 BCL9O00512 1426 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms