RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 RPIAP49247 311 aa8.57□□□□□ -1.04
LINC00393-202ENST00000452852 PTPRNQ16849 979 aa8.57□□□□□ -1.04
LINC00393-202ENST00000452852 LYPD8Q6UX82 237 aa8.57□□□□□ -1.04
LINC00393-202ENST00000452852 PCMTD1Q96MG8 357 aaPredicted RBP8.57□□□□□ -1.04
LINC00393-202ENST00000452852 CCNYL3P0C7X3 344 aa8.56□□□□□ -1.04
LINC00393-202ENST00000452852 PTCRAQ6ISU1 281 aaPredicted RBP8.56□□□□□ -1.04
LINC00393-202ENST00000452852 CD2BP2O95400 341 aaKnown RBP8.55□□□□□ -1.04
LINC00393-202ENST00000452852 NFX1Q12986 1120 aaKnown RBP8.55□□□□□ -1.04
LINC00393-202ENST00000452852 PPP2R2DQ66LE6 453 aa8.55□□□□□ -1.04
LINC00393-202ENST00000452852 PER1O15534 1290 aaPredicted RBP8.54□□□□□ -1.04
LINC00393-202ENST00000452852 HELBQ8NG08 1087 aaPredicted RBP8.54□□□□□ -1.04
LINC00393-202ENST00000452852 EVA1BQ9NVM1 165 aa8.54□□□□□ -1.04
LINC00393-202ENST00000452852 TRIM32Q13049 653 aa8.53□□□□□ -1.04
LINC00393-202ENST00000452852 GDF9O60383 454 aa8.52□□□□□ -1.05
LINC00393-202ENST00000452852 CTDSPL2Q05D32 466 aa8.52□□□□□ -1.05
LINC00393-202ENST00000452852 KCNH2Q12809 1159 aa8.52□□□□□ -1.05
LINC00393-202ENST00000452852 TMEM132AQ24JP5 1023 aa8.52□□□□□ -1.05
LINC00393-202ENST00000452852 CTHP32929 405 aa8.51□□□□□ -1.05
LINC00393-202ENST00000452852 MAP10Q9P2G4 905 aa8.51□□□□□ -1.05
LINC00393-202ENST00000452852 AP1G2O75843 785 aa8.5□□□□□ -1.05
LINC00393-202ENST00000452852 F12P00748 615 aaPredicted RBP8.5□□□□□ -1.05
LINC00393-202ENST00000452852 RFC5P40937 340 aa8.5□□□□□ -1.05
LINC00393-202ENST00000452852 SUZ12Q15022 739 aaKnown RBP8.5□□□□□ -1.05
LINC00393-202ENST00000452852 CRIPAKQ8N1N5 446 aa8.5□□□□□ -1.05
LINC00393-202ENST00000452852 UNC93B1Q9H1C4 597 aa8.5□□□□□ -1.05
LINC00393-202ENST00000452852 GMPR2Q9P2T1 348 aaKnown RBP8.5□□□□□ -1.05
LINC00393-202ENST00000452852 AXIN1O15169 862 aa8.49□□□□□ -1.05
LINC00393-202ENST00000452852 FOXC1Q12948 553 aa8.48□□□□□ -1.05
LINC00393-202ENST00000452852 PKD2L1Q9P0L9 805 aa8.48□□□□□ -1.05
LINC00393-202ENST00000452852 SKOR1P84550 965 aa8.47□□□□□ -1.05
LINC00393-202ENST00000452852 LRRN4Q8WUT4 740 aa8.47□□□□□ -1.05
LINC00393-202ENST00000452852 BAP1Q92560 729 aa8.47□□□□□ -1.05
LINC00393-202ENST00000452852 WNT7BP56706 349 aa8.46□□□□□ -1.06
LINC00393-202ENST00000452852 LINC01559Q495D7 138 aa8.46□□□□□ -1.06
LINC00393-202ENST00000452852 DACH1Q9UI36 760 aa8.46□□□□□ -1.06
LINC00393-202ENST00000452852 USP17L8P0C7I0 530 aa8.45□□□□□ -1.06
LINC00393-202ENST00000452852 WNT7AO00755 349 aa8.44□□□□□ -1.06
LINC00393-202ENST00000452852 TERTO14746 1132 aaKnown RBP8.44□□□□□ -1.06
LINC00393-202ENST00000452852 SH3BP2P78314 561 aa8.44□□□□□ -1.06
LINC00393-202ENST00000452852 CTC1Q2NKJ3 1217 aa8.44□□□□□ -1.06
LINC00393-202ENST00000452852 TMEM259Q4ZIN3 620 aa8.44□□□□□ -1.06
LINC00393-202ENST00000452852 RC3H1Q5TC82 1133 aaKnown RBP8.44□□□□□ -1.06
LINC00393-202ENST00000452852 ZNF511Q8NB15 262 aa8.43□□□□□ -1.06
LINC00393-202ENST00000452852 MRGPRX2Q96LB1 330 aa8.43□□□□□ -1.06
LINC00393-202ENST00000452852 NR6A1Q15406 480 aa8.42□□□□□ -1.06
LINC00393-202ENST00000452852 HMX1Q9NP08 348 aaPredicted RBP8.42□□□□□ -1.06
LINC00393-202ENST00000452852 AVPP01185 164 aa8.41□□□□□ -1.06
LINC00393-202ENST00000452852 ERICH6Q7L0X2 663 aa8.4□□□□□ -1.06
LINC00393-202ENST00000452852 C14orf37Q86TY3 774 aa8.4□□□□□ -1.06
LINC00393-202ENST00000452852 CYP4X1Q8N118 509 aa8.4□□□□□ -1.06
LINC00393-202ENST00000452852 EHBP1Q8NDI1 1231 aa8.4□□□□□ -1.06
LINC00393-202ENST00000452852 ARMC2Q8NEN0 867 aa8.4□□□□□ -1.06
LINC00393-202ENST00000452852 EPS8L1Q8TE68 723 aa8.4□□□□□ -1.06
LINC00393-202ENST00000452852 TOR4AQ9NXH8 423 aa8.4□□□□□ -1.06
LINC00393-202ENST00000452852 FOXJ1Q92949 421 aa8.39□□□□□ -1.07
LINC00393-202ENST00000452852 TTC24A2A3L6 582 aaPredicted RBP8.38□□□□□ -1.07
LINC00393-202ENST00000452852 ZSCAN1Q8NBB4 408 aa8.38□□□□□ -1.07
LINC00393-202ENST00000452852 SNIP1Q8TAD8 396 aaKnown RBP8.38□□□□□ -1.07
LINC00393-202ENST00000452852 SLC16A10Q8TF71 515 aa8.38□□□□□ -1.07
LINC00393-202ENST00000452852 SIAH2O43255 324 aa8.37□□□□□ -1.07
LINC00393-202ENST00000452852 NBPF14Q5TI25 921 aa8.37□□□□□ -1.07
LINC00393-202ENST00000452852 BANK1Q8NDB2 785 aa8.37□□□□□ -1.07
LINC00393-202ENST00000452852 SENP2Q9HC62 589 aa8.37□□□□□ -1.07
LINC00393-202ENST00000452852 FKBPLQ9UIM3 349 aa8.37□□□□□ -1.07
LINC00393-202ENST00000452852 SMCPP49901 116 aaPredicted RBP8.36□□□□□ -1.07
LINC00393-202ENST00000452852 AGERQ15109 404 aa8.36□□□□□ -1.07
LINC00393-202ENST00000452852 C4orf48Q5BLP8 95 aa8.36□□□□□ -1.07
LINC00393-202ENST00000452852 TRIM34Q9BYJ4 488 aa8.36□□□□□ -1.07
LINC00393-202ENST00000452852 SNRKQ9NRH2 765 aa8.36□□□□□ -1.07
LINC00393-202ENST00000452852 J3QL48 77 aa8.35□□□□□ -1.07
LINC00393-202ENST00000452852 VARSP26640 1264 aaKnown RBP8.35□□□□□ -1.07
LINC00393-202ENST00000452852 BPHLQ86WA6 291 aaPredicted RBP8.35□□□□□ -1.07
LINC00393-202ENST00000452852 GJD4Q96KN9 370 aaPredicted RBP8.35□□□□□ -1.07
LINC00393-202ENST00000452852 ALDH1A1P00352 501 aa8.34□□□□□ -1.07
LINC00393-202ENST00000452852 SH3BP5LQ7L8J4 393 aa8.34□□□□□ -1.07
LINC00393-202ENST00000452852 MTMR14Q8NCE2 650 aa8.34□□□□□ -1.07
LINC00393-202ENST00000452852 GPKOWQ92917 476 aaPredicted RBP eCLIP8.34□□□□□ -1.07
LINC00393-202ENST00000452852 ARXQ96QS3 562 aa8.34□□□□□ -1.07
LINC00393-202ENST00000452852 SMPD1P17405 629 aa8.33□□□□□ -1.08
LINC00393-202ENST00000452852 LCE2CQ5TA81 110 aa8.33□□□□□ -1.08
LINC00393-202ENST00000452852 SH3RF1Q7Z6J0 888 aa8.33□□□□□ -1.08
LINC00393-202ENST00000452852 ZC3H4Q9UPT8 1303 aaKnown RBP8.32□□□□□ -1.08
LINC00393-202ENST00000452852 MAGEB6P1A0A0J9YX57 407 aa8.32□□□□□ -1.08
LINC00393-202ENST00000452852 SNRPBP14678 240 aaKnown RBP8.32□□□□□ -1.08
LINC00393-202ENST00000452852 PDXDC2PQ6P474 469 aa8.32□□□□□ -1.08
LINC00393-202ENST00000452852 FAM174AQ8TBP5 190 aa8.32□□□□□ -1.08
LINC00393-202ENST00000452852 TLL2Q9Y6L7 1015 aa8.32□□□□□ -1.08
LINC00393-202ENST00000452852 PNMA1Q8ND90 353 aa8.31□□□□□ -1.08
LINC00393-202ENST00000452852 TRIM47Q96LD4 638 aa8.31□□□□□ -1.08
LINC00393-202ENST00000452852 CARD14Q9BXL6 1004 aa8.31□□□□□ -1.08
LINC00393-202ENST00000452852 ATP13A2Q9NQ11 1180 aa8.31□□□□□ -1.08
LINC00393-202ENST00000452852 ARHGAP9Q9BRR9 750 aa8.3□□□□□ -1.08
LINC00393-202ENST00000452852 SOCS7O14512 581 aa8.29□□□□□ -1.08
LINC00393-202ENST00000452852 PTK2Q05397 1052 aa8.29□□□□□ -1.08
LINC00393-202ENST00000452852 ARID5BQ14865 1188 aa8.29□□□□□ -1.08
LINC00393-202ENST00000452852 MPNDQ8N594 471 aa8.29□□□□□ -1.08
LINC00393-202ENST00000452852 HPS1Q92902 700 aa8.29□□□□□ -1.08
LINC00393-202ENST00000452852 KIFC2Q96AC6 838 aa8.29□□□□□ -1.08
LINC00393-202ENST00000452852 OCSTAMPQ9BR26 566 aa8.29□□□□□ -1.08
LINC00393-202ENST00000452852 C1QTNF2Q9BXJ5 285 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms