RNA–Protein interactions for RNA: ENST00000452293.5

RETREG2-207, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 4

Gene RETREG2, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-207ENST00000452293 FNBP4Q8N3X1 1017 aaPredicted RBP37.04■■■■□ 3.52
RETREG2-207ENST00000452293 NUTM2GQ5VZR2 741 aa37.03■■■■□ 3.52
RETREG2-207ENST00000452293 CABP1Q9NZU7 370 aa37.02■■■■□ 3.52
RETREG2-207ENST00000452293 BCL9LQ86UU0 1499 aa37.01■■■■□ 3.51
RETREG2-207ENST00000452293 PHRF1Q9P1Y6 1649 aaKnown RBP36.99■■■■□ 3.51
RETREG2-207ENST00000452293 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.99■■■■□ 3.51
RETREG2-207ENST00000452293 ATRNO75882 1429 aa36.97■■■■□ 3.51
RETREG2-207ENST00000452293 CCER1Q8TC90 406 aaPredicted RBP36.97■■■■□ 3.51
RETREG2-207ENST00000452293 SLIT2O94813 1529 aa36.96■■■■□ 3.51
RETREG2-207ENST00000452293 AKAP12Q02952 1782 aa36.96■■■■□ 3.51
RETREG2-207ENST00000452293 RBM6P78332 1123 aaKnown RBP36.95■■■■□ 3.51
RETREG2-207ENST00000452293 RGS12O14924 1447 aa36.94■■■■□ 3.5
RETREG2-207ENST00000452293 CLSPNQ9HAW4 1339 aa36.94■■■■□ 3.5
RETREG2-207ENST00000452293 TRPC5Q9UL62 973 aaPredicted RBP36.94■■■■□ 3.5
RETREG2-207ENST00000452293 NWD2Q9ULI1 1742 aa36.92■■■■□ 3.5
RETREG2-207ENST00000452293 SBNO2Q9Y2G9 1366 aa36.91■■■■□ 3.5
RETREG2-207ENST00000452293 FAM83GA6ND36 823 aa36.9■■■■□ 3.5
RETREG2-207ENST00000452293 CDK12Q9NYV4 1490 aaPredicted RBP36.89■■■■□ 3.5
RETREG2-207ENST00000452293 USP6P35125 1406 aa36.89■■■■□ 3.5
RETREG2-207ENST00000452293 ST20-MTHFSA0A0A6YYL1 179 aa36.88■■■■□ 3.49
RETREG2-207ENST00000452293 UNC5CLQ8IV45 518 aa36.88■■■■□ 3.49
RETREG2-207ENST00000452293 ABTB2Q8N961 1025 aa36.88■■■■□ 3.49
RETREG2-207ENST00000452293 NRAPQ86VF7 1730 aa36.88■■■■□ 3.49
RETREG2-207ENST00000452293 COL14A1Q05707 1796 aaKnown RBP36.87■■■■□ 3.49
RETREG2-207ENST00000452293 ATAD2Q6PL18 1390 aa36.85■■■■□ 3.49
RETREG2-207ENST00000452293 GLI3P10071 1580 aa36.84■■■■□ 3.49
RETREG2-207ENST00000452293 NRKQ7Z2Y5 1582 aa36.83■■■■□ 3.49
RETREG2-207ENST00000452293 PIK3C2AO00443 1686 aa36.83■■■■□ 3.49
RETREG2-207ENST00000452293 USP47Q96K76 1375 aa36.81■■■■□ 3.48
RETREG2-207ENST00000452293 TESK2Q96S53 571 aa36.81■■■■□ 3.48
RETREG2-207ENST00000452293 MON2Q7Z3U7 1717 aa36.81■■■■□ 3.48
RETREG2-207ENST00000452293 ZC3H6P61129 1189 aaKnown RBP36.8■■■■□ 3.48
RETREG2-207ENST00000452293 CHRNA2Q15822 529 aa36.79■■■■□ 3.48
RETREG2-207ENST00000452293 GJD4Q96KN9 370 aaPredicted RBP36.79■■■■□ 3.48
RETREG2-207ENST00000452293 TIMELESSQ9UNS1 1208 aa36.79■■■■□ 3.48
RETREG2-207ENST00000452293 KIAA0232Q92628 1395 aa36.78■■■■□ 3.48
RETREG2-207ENST00000452293 SSH2Q76I76 1423 aa36.78■■■■□ 3.48
RETREG2-207ENST00000452293 BTG4Q9NY30 223 aa36.78■■■■□ 3.48
RETREG2-207ENST00000452293 TMC1Q8TDI8 760 aa36.77■■■■□ 3.48
RETREG2-207ENST00000452293 PRDM11Q9NQV5 511 aa36.77■■■■□ 3.48
RETREG2-207ENST00000452293 CCDC9Q9Y3X0 531 aaKnown RBP36.76■■■■□ 3.48
RETREG2-207ENST00000452293 USP19O94966 1318 aa36.75■■■■□ 3.47
RETREG2-207ENST00000452293 BRWD3Q6RI45 1802 aa36.75■■■■□ 3.47
RETREG2-207ENST00000452293 CPSF1Q10570 1443 aaKnown RBP36.75■■■■□ 3.47
RETREG2-207ENST00000452293 CD163L1Q9NR16 1453 aa36.74■■■■□ 3.47
RETREG2-207ENST00000452293 NLRP13Q86W25 1043 aa36.73■■■■□ 3.47
RETREG2-207ENST00000452293 SLC12A5Q9H2X9 1139 aa36.73■■■■□ 3.47
RETREG2-207ENST00000452293 KTN1Q86UP2 1357 aaKnown RBP36.73■■■■□ 3.47
RETREG2-207ENST00000452293 BRD4O60885 1362 aaPredicted RBP36.72■■■■□ 3.47
RETREG2-207ENST00000452293 TTC21BQ7Z4L5 1316 aa36.72■■■■□ 3.47
RETREG2-207ENST00000452293 NLRP6P59044 892 aa36.71■■■■□ 3.47
RETREG2-207ENST00000452293 VPS72Q15906 364 aa36.71■■■■□ 3.47
RETREG2-207ENST00000452293 ZNF692Q9BU19 519 aaPredicted RBP36.7■■■■□ 3.47
RETREG2-207ENST00000452293 ZBTB7CA1YPR0 619 aa36.67■■■■□ 3.46
RETREG2-207ENST00000452293 SLIT3O75094 1523 aa36.66■■■■□ 3.46
RETREG2-207ENST00000452293 GCP02774 474 aa36.66■■■■□ 3.46
RETREG2-207ENST00000452293 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.65■■■■□ 3.46
RETREG2-207ENST00000452293 UPF1Q92900 1129 aaKnown RBP eCLIP36.65■■■■□ 3.46
RETREG2-207ENST00000452293 ZRANB1Q9UGI0 708 aa36.64■■■■□ 3.46
RETREG2-207ENST00000452293 LMO7Q8WWI1 1683 aa36.63■■■■□ 3.45
RETREG2-207ENST00000452293 STRN4Q9NRL3 753 aa36.62■■■■□ 3.45
RETREG2-207ENST00000452293 A0A1W2PP64 1363 aa36.62■■■■□ 3.45
RETREG2-207ENST00000452293 SOX12O15370 315 aa36.61■■■■□ 3.45
RETREG2-207ENST00000452293 CAMTA1Q9Y6Y1 1673 aa36.61■■■■□ 3.45
RETREG2-207ENST00000452293 HDGFL2Q7Z4V5 671 aaPredicted RBP36.6■■■■□ 3.45
RETREG2-207ENST00000452293 TTC21AQ8NDW8 1320 aa36.59■■■■□ 3.45
RETREG2-207ENST00000452293 RGPD5Q99666 1765 aa36.59■■■■□ 3.45
RETREG2-207ENST00000452293 CPDO75976 1380 aa36.58■■■■□ 3.45
RETREG2-207ENST00000452293 TMF1P82094 1093 aa36.58■■■■□ 3.45
RETREG2-207ENST00000452293 PUS7Q96PZ0 661 aaKnown RBP36.58■■■■□ 3.45
RETREG2-207ENST00000452293 NME9Q86XW9 330 aa36.57■■■■□ 3.44
RETREG2-207ENST00000452293 SEPT12Q8IYM1 358 aa36.56■■■■□ 3.44
RETREG2-207ENST00000452293 A0A0G2JS52 829 aa36.55■■■■□ 3.44
RETREG2-207ENST00000452293 MYT1Q01538 1121 aa36.55■■■■□ 3.44
RETREG2-207ENST00000452293 FAM98CQ17RN3 349 aaKnown RBP36.55■■■■□ 3.44
RETREG2-207ENST00000452293 COL18A1P39060 1754 aa36.55■■■■□ 3.44
RETREG2-207ENST00000452293 TERF2IPQ9NYB0 399 aa36.54■■■■□ 3.44
RETREG2-207ENST00000452293 SPATA31A5Q5VU36 1347 aa36.54■■■■□ 3.44
RETREG2-207ENST00000452293 SPATA31A7Q8IWB4 1347 aa36.54■■■■□ 3.44
RETREG2-207ENST00000452293 USP54Q70EL1 1684 aa36.53■■■■□ 3.44
RETREG2-207ENST00000452293 EDC4Q6P2E9 1401 aaKnown RBP36.52■■■■□ 3.44
RETREG2-207ENST00000452293 MYOM1P52179 1685 aa36.51■■■■□ 3.43
RETREG2-207ENST00000452293 EVA1CP58658 441 aa36.5■■■■□ 3.43
RETREG2-207ENST00000452293 NFAT5O94916 1531 aa36.49■■■■□ 3.43
RETREG2-207ENST00000452293 SLC24A1O60721 1099 aa36.49■■■■□ 3.43
RETREG2-207ENST00000452293 USP35Q9P2H5 1018 aa36.49■■■■□ 3.43
RETREG2-207ENST00000452293 LARP1Q6PKG0 1096 aaKnown RBP36.48■■■■□ 3.43
RETREG2-207ENST00000452293 LTN1O94822 1766 aa36.48■■■■□ 3.43
RETREG2-207ENST00000452293 SPATA31A1Q5TZJ5 1347 aa36.47■■■■□ 3.43
RETREG2-207ENST00000452293 NINLQ9Y2I6 1382 aa36.47■■■■□ 3.43
RETREG2-207ENST00000452293 THSD7AQ9UPZ6 1657 aa36.46■■■■□ 3.43
RETREG2-207ENST00000452293 ONECUT3O60422 494 aaPredicted RBP36.46■■■■□ 3.43
RETREG2-207ENST00000452293 COL5A2P05997 1499 aaPredicted RBP36.45■■■■□ 3.43
RETREG2-207ENST00000452293 USP31Q70CQ4 1352 aa36.45■■■■□ 3.43
RETREG2-207ENST00000452293 EP400Q96L91 3159 aa36.44■■■■□ 3.42
RETREG2-207ENST00000452293 HSPA5P11021 654 aaKnown RBP36.43■■■■□ 3.42
RETREG2-207ENST00000452293 KCNH5Q8NCM2 988 aa36.43■■■■□ 3.42
RETREG2-207ENST00000452293 AATKQ6ZMQ8 1374 aa36.42■■■■□ 3.42
RETREG2-207ENST00000452293 ANKRD36BQ8N2N9 1353 aa36.42■■■■□ 3.42
RETREG2-207ENST00000452293 ARHGEF25Q86VW2 580 aa36.41■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms