RNA–Protein interactions for RNA: ENST00000451744.1

LINC00458-203, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best)

Gene LINC00458, Length 1,020 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-203ENST00000451744 URB2Q14146 1524 aaKnown RBP10.9□□□□□ -0.66
LINC00458-203ENST00000451744 ALDH1A1P00352 501 aa10.9□□□□□ -0.66
LINC00458-203ENST00000451744 SPIRE2Q8WWL2 714 aa10.89□□□□□ -0.67
LINC00458-203ENST00000451744 MS4A1P11836 297 aa10.88□□□□□ -0.67
LINC00458-203ENST00000451744 NDUFV2P19404 249 aa10.88□□□□□ -0.67
LINC00458-203ENST00000451744 NFX1Q12986 1120 aaKnown RBP10.88□□□□□ -0.67
LINC00458-203ENST00000451744 TTLL12Q14166 644 aaPredicted RBP10.88□□□□□ -0.67
LINC00458-203ENST00000451744 TRIM47Q96LD4 638 aa10.88□□□□□ -0.67
LINC00458-203ENST00000451744 EHBP1Q8NDI1 1231 aa10.87□□□□□ -0.67
LINC00458-203ENST00000451744 SENP2Q9HC62 589 aa10.87□□□□□ -0.67
LINC00458-203ENST00000451744 MOXD2PA6NHM9 499 aa10.86□□□□□ -0.67
LINC00458-203ENST00000451744 CCNYL3P0C7X3 344 aa10.86□□□□□ -0.67
LINC00458-203ENST00000451744 SIAH2O43255 324 aa10.85□□□□□ -0.67
LINC00458-203ENST00000451744 BARGINQ6ZT62 677 aa10.85□□□□□ -0.67
LINC00458-203ENST00000451744 SH3BP2P78314 561 aa10.84□□□□□ -0.67
LINC00458-203ENST00000451744 ZMYND10O75800 440 aa10.83□□□□□ -0.68
LINC00458-203ENST00000451744 AMHR2Q16671 573 aa10.83□□□□□ -0.68
LINC00458-203ENST00000451744 PTPRNQ16849 979 aa10.83□□□□□ -0.68
LINC00458-203ENST00000451744 GIGYF2Q6Y7W6 1299 aaKnown RBP10.83□□□□□ -0.68
LINC00458-203ENST00000451744 PRR7Q8TB68 274 aa10.82□□□□□ -0.68
LINC00458-203ENST00000451744 KIFC2Q96AC6 838 aa10.82□□□□□ -0.68
LINC00458-203ENST00000451744 UNC93B1Q9H1C4 597 aa10.82□□□□□ -0.68
LINC00458-203ENST00000451744 WASF2Q9Y6W5 498 aa10.82□□□□□ -0.68
LINC00458-203ENST00000451744 LINC01559Q495D7 138 aa10.81□□□□□ -0.68
LINC00458-203ENST00000451744 TERTO14746 1132 aaKnown RBP10.8□□□□□ -0.68
LINC00458-203ENST00000451744 LCE2CQ5TA81 110 aa10.8□□□□□ -0.68
LINC00458-203ENST00000451744 ZC3H15Q8WU90 426 aaKnown RBP10.8□□□□□ -0.68
LINC00458-203ENST00000451744 BEGAINQ9BUH8 593 aa10.8□□□□□ -0.68
LINC00458-203ENST00000451744 EVA1BQ9NVM1 165 aa10.8□□□□□ -0.68
LINC00458-203ENST00000451744 TOPBP1Q92547 1522 aa10.79□□□□□ -0.68
LINC00458-203ENST00000451744 BMP1P13497 986 aa10.79□□□□□ -0.68
LINC00458-203ENST00000451744 MTMR2Q13614 643 aa10.79□□□□□ -0.68
LINC00458-203ENST00000451744 BAP1Q92560 729 aa10.79□□□□□ -0.68
LINC00458-203ENST00000451744 CAPN5O15484 640 aaPredicted RBP10.78□□□□□ -0.68
LINC00458-203ENST00000451744 KCNH2Q12809 1159 aa10.78□□□□□ -0.68
LINC00458-203ENST00000451744 DNMBPQ6XZF7 1577 aa10.77□□□□□ -0.68
LINC00458-203ENST00000451744 WIPF1O43516 503 aa10.77□□□□□ -0.69
LINC00458-203ENST00000451744 TLL2Q9Y6L7 1015 aa10.77□□□□□ -0.69
LINC00458-203ENST00000451744 SPDYE5A6NIY4 337 aa10.76□□□□□ -0.69
LINC00458-203ENST00000451744 TRIM46Q7Z4K8 759 aa10.76□□□□□ -0.69
LINC00458-203ENST00000451744 TBC1D2Q9BYX2 928 aa10.76□□□□□ -0.69
LINC00458-203ENST00000451744 CUX1P39880 1505 aa10.75□□□□□ -0.69
LINC00458-203ENST00000451744 DESI1Q6ICB0 168 aa10.75□□□□□ -0.69
LINC00458-203ENST00000451744 ZNF511Q8NB15 262 aa10.75□□□□□ -0.69
LINC00458-203ENST00000451744 PARP9Q8IXQ6 854 aa10.74□□□□□ -0.69
LINC00458-203ENST00000451744 ZNF608Q9ULD9 1512 aaPredicted RBP10.74□□□□□ -0.69
LINC00458-203ENST00000451744 RSBN1LQ6PCB5 846 aaPredicted RBP10.73□□□□□ -0.69
LINC00458-203ENST00000451744 PCDHB15Q9Y5E8 787 aa10.73□□□□□ -0.69
LINC00458-203ENST00000451744 INSM1Q01101 510 aaPredicted RBP10.72□□□□□ -0.69
LINC00458-203ENST00000451744 ABCC8Q09428 1581 aa10.72□□□□□ -0.69
LINC00458-203ENST00000451744 TARBP1Q13395 1621 aaKnown RBP10.72□□□□□ -0.69
LINC00458-203ENST00000451744 CFAP99D6REC4 459 aa10.71□□□□□ -0.69
LINC00458-203ENST00000451744 POLA1P09884 1462 aaPredicted RBP10.71□□□□□ -0.69
LINC00458-203ENST00000451744 VARSP26640 1264 aaKnown RBP10.71□□□□□ -0.69
LINC00458-203ENST00000451744 CTHP32929 405 aa10.71□□□□□ -0.69
LINC00458-203ENST00000451744 GJA5P36382 358 aa10.71□□□□□ -0.69
LINC00458-203ENST00000451744 STK17AQ9UEE5 414 aa10.71□□□□□ -0.69
LINC00458-203ENST00000451744 EIF4G3O43432 1585 aaKnown RBP10.7□□□□□ -0.7
LINC00458-203ENST00000451744 TRIM66O15016 1216 aa10.7□□□□□ -0.7
LINC00458-203ENST00000451744 DIXDC1Q155Q3 683 aa10.7□□□□□ -0.7
LINC00458-203ENST00000451744 LYPD8Q6UX82 237 aa10.7□□□□□ -0.7
LINC00458-203ENST00000451744 RAD54L2Q9Y4B4 1467 aa10.69□□□□□ -0.7
LINC00458-203ENST00000451744 PLEKHG3A1L390 1219 aa10.69□□□□□ -0.7
LINC00458-203ENST00000451744 NNTQ13423 1086 aa10.69□□□□□ -0.7
LINC00458-203ENST00000451744 FGD5Q6ZNL6 1462 aa10.68□□□□□ -0.7
LINC00458-203ENST00000451744 SPTLC1O15269 473 aa10.68□□□□□ -0.7
LINC00458-203ENST00000451744 HRCP23327 699 aa10.68□□□□□ -0.7
LINC00458-203ENST00000451744 MAP10Q9P2G4 905 aa10.68□□□□□ -0.7
LINC00458-203ENST00000451744 NXF1Q9UBU9 619 aaKnown RBP10.68□□□□□ -0.7
LINC00458-203ENST00000451744 WDR97A6NE52 1622 aa10.68□□□□□ -0.7
LINC00458-203ENST00000451744 SYNJ1O43426 1573 aa10.68□□□□□ -0.7
LINC00458-203ENST00000451744 IFT140Q96RY7 1462 aa10.68□□□□□ -0.7
LINC00458-203ENST00000451744 SLC16A10Q8TF71 515 aa10.67□□□□□ -0.7
LINC00458-203ENST00000451744 ZFP42Q96MM3 310 aa10.67□□□□□ -0.7
LINC00458-203ENST00000451744 ZBTB3Q9H5J0 574 aa10.67□□□□□ -0.7
LINC00458-203ENST00000451744 CSPP1Q1MSJ5 1256 aa10.66□□□□□ -0.7
LINC00458-203ENST00000451744 RIC3Q7Z5B4 369 aa10.66□□□□□ -0.7
LINC00458-203ENST00000451744 MPNDQ8N594 471 aa10.66□□□□□ -0.7
LINC00458-203ENST00000451744 CABLES1Q8TDN4 633 aa10.66□□□□□ -0.7
LINC00458-203ENST00000451744 VEGFBP49765 207 aa10.65□□□□□ -0.7
LINC00458-203ENST00000451744 FOXJ1Q92949 421 aa10.65□□□□□ -0.7
LINC00458-203ENST00000451744 AK7Q96M32 723 aa10.65□□□□□ -0.7
LINC00458-203ENST00000451744 F12P00748 615 aaPredicted RBP10.64□□□□□ -0.71
LINC00458-203ENST00000451744 TIMP2P16035 220 aa10.64□□□□□ -0.71
LINC00458-203ENST00000451744 WDR4P57081 412 aaKnown RBP10.64□□□□□ -0.71
LINC00458-203ENST00000451744 FAM174AQ8TBP5 190 aa10.64□□□□□ -0.71
LINC00458-203ENST00000451744 BIVM-ERCC5R4GMW8 1640 aa10.64□□□□□ -0.71
LINC00458-203ENST00000451744 MRPL14Q6P1L8 145 aaKnown RBP10.63□□□□□ -0.71
LINC00458-203ENST00000451744 AQRO60306 1485 aaKnown RBP eCLIP10.62□□□□□ -0.71
LINC00458-203ENST00000451744 CHD1O14646 1710 aa10.62□□□□□ -0.71
LINC00458-203ENST00000451744 ADH1CP00326 375 aa10.62□□□□□ -0.71
LINC00458-203ENST00000451744 GMPRP36959 345 aa10.62□□□□□ -0.71
LINC00458-203ENST00000451744 ARID5BQ14865 1188 aa10.62□□□□□ -0.71
LINC00458-203ENST00000451744 PRPF38BQ5VTL8 546 aaKnown RBP10.62□□□□□ -0.71
LINC00458-203ENST00000451744 PER1O15534 1290 aaPredicted RBP10.61□□□□□ -0.71
LINC00458-203ENST00000451744 TSC1Q92574 1164 aa10.61□□□□□ -0.71
LINC00458-203ENST00000451744 PURBQ96QR8 312 aaKnown RBP10.61□□□□□ -0.71
LINC00458-203ENST00000451744 TOP2BQ02880 1626 aa10.61□□□□□ -0.71
LINC00458-203ENST00000451744 PBRM1Q86U86 1689 aa10.6□□□□□ -0.71
LINC00458-203ENST00000451744 SCARF1Q14162 830 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms