RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-217ENST00000450931 CFAP70Q5T0N1 1121 aa9.79□□□□□ -0.84
PMS1-217ENST00000450931 A0A0G2JS52 829 aa9.79□□□□□ -0.84
PMS1-217ENST00000450931 MYT1Q01538 1121 aa9.79□□□□□ -0.84
PMS1-217ENST00000450931 LMOD2Q6P5Q4 547 aa9.79□□□□□ -0.84
PMS1-217ENST00000450931 STAC3Q96MF2 364 aa9.79□□□□□ -0.84
PMS1-217ENST00000450931 POGKQ9P215 609 aa9.79□□□□□ -0.84
PMS1-217ENST00000450931 TOPAZ1Q8N9V7 1692 aa9.79□□□□□ -0.84
PMS1-217ENST00000450931 NUP188Q5SRE5 1749 aa9.79□□□□□ -0.84
PMS1-217ENST00000450931 ARHGEF28Q8N1W1 1705 aaKnown RBP9.78□□□□□ -0.84
PMS1-217ENST00000450931 RGPD3A6NKT7 1758 aaPredicted RBP9.78□□□□□ -0.84
PMS1-217ENST00000450931 RGPD4Q7Z3J3 1758 aa9.78□□□□□ -0.84
PMS1-217ENST00000450931 PSDA5PKW4 1024 aaPredicted RBP9.78□□□□□ -0.84
PMS1-217ENST00000450931 PMFBP1Q8TBY8 1022 aa9.77□□□□□ -0.85
PMS1-217ENST00000450931 SPATA31A1Q5TZJ5 1347 aa9.77□□□□□ -0.85
PMS1-217ENST00000450931 EN1Q05925 392 aaPredicted RBP9.77□□□□□ -0.85
PMS1-217ENST00000450931 FAM196AQ6ZSG2 479 aa9.77□□□□□ -0.85
PMS1-217ENST00000450931 NRKQ7Z2Y5 1582 aa9.77□□□□□ -0.85
PMS1-217ENST00000450931 LMO7Q8WWI1 1683 aa9.76□□□□□ -0.85
PMS1-217ENST00000450931 PRR36Q9H6K5 1346 aa9.76□□□□□ -0.85
PMS1-217ENST00000450931 WASLO00401 505 aaPredicted RBP9.76□□□□□ -0.85
PMS1-217ENST00000450931 PARP4Q9UKK3 1724 aaKnown RBP9.76□□□□□ -0.85
PMS1-217ENST00000450931 C11orf95C9JLR9 678 aaPredicted RBP9.75□□□□□ -0.85
PMS1-217ENST00000450931 CAMKK2Q96RR4 588 aa9.75□□□□□ -0.85
PMS1-217ENST00000450931 PRDM11Q9NQV5 511 aa9.75□□□□□ -0.85
PMS1-217ENST00000450931 R3HDM1Q15032 1099 aaKnown RBP9.75□□□□□ -0.85
PMS1-217ENST00000450931 BARGINQ6ZT62 677 aa9.75□□□□□ -0.85
PMS1-217ENST00000450931 KIAA1210Q9ULL0 1709 aa9.75□□□□□ -0.85
PMS1-217ENST00000450931 SAFB2Q14151 953 aaKnown RBP eCLIP9.74□□□□□ -0.85
PMS1-217ENST00000450931 SSH2Q76I76 1423 aa9.74□□□□□ -0.85
PMS1-217ENST00000450931 POLR3AO14802 1390 aaPredicted RBP9.74□□□□□ -0.85
PMS1-217ENST00000450931 EZH2Q15910 746 aaKnown RBP9.74□□□□□ -0.85
PMS1-217ENST00000450931 NGDNQ8NEJ9 315 aaKnown RBP9.74□□□□□ -0.85
PMS1-217ENST00000450931 CPDO75976 1380 aa9.73□□□□□ -0.85
PMS1-217ENST00000450931 KIAA0232Q92628 1395 aa9.73□□□□□ -0.85
PMS1-217ENST00000450931 BRD4O60885 1362 aaPredicted RBP9.73□□□□□ -0.85
PMS1-217ENST00000450931 MINK1Q8N4C8 1332 aaPredicted RBP9.72□□□□□ -0.85
PMS1-217ENST00000450931 NINLQ9Y2I6 1382 aa9.72□□□□□ -0.85
PMS1-217ENST00000450931 PLEKHG5O94827 1062 aa9.72□□□□□ -0.85
PMS1-217ENST00000450931 TRAK1Q9UPV9 953 aa9.72□□□□□ -0.85
PMS1-217ENST00000450931 PEAK1Q9H792 1746 aa9.72□□□□□ -0.85
PMS1-217ENST00000450931 THRAP3Q9Y2W1 955 aaKnown RBP9.72□□□□□ -0.85
PMS1-217ENST00000450931 NBPF8Q3BBV2 869 aa9.71□□□□□ -0.85
PMS1-217ENST00000450931 NBPF14Q5TI25 921 aa9.71□□□□□ -0.85
PMS1-217ENST00000450931 USP19O94966 1318 aa9.71□□□□□ -0.86
PMS1-217ENST00000450931 WNK3Q9BYP7 1800 aa9.71□□□□□ -0.86
PMS1-217ENST00000450931 CAMTA1Q9Y6Y1 1673 aa9.71□□□□□ -0.86
PMS1-217ENST00000450931 PAK3O75914 559 aaPredicted RBP9.7□□□□□ -0.86
PMS1-217ENST00000450931 APBA3O96018 575 aa9.7□□□□□ -0.86
PMS1-217ENST00000450931 HIRIP3Q9BW71 556 aaPredicted RBP9.7□□□□□ -0.86
PMS1-217ENST00000450931 TRIM37O94972 964 aa9.7□□□□□ -0.86
PMS1-217ENST00000450931 FAM182BQ5T319 152 aa9.7□□□□□ -0.86
PMS1-217ENST00000450931 NUDT16Q96DE0 195 aaKnown RBP9.7□□□□□ -0.86
PMS1-217ENST00000450931 PDE3BQ13370 1112 aa9.69□□□□□ -0.86
PMS1-217ENST00000450931 CASZ1Q86V15 1759 aa9.69□□□□□ -0.86
PMS1-217ENST00000450931 LRRC37A3O60309 1634 aa9.69□□□□□ -0.86
PMS1-217ENST00000450931 COL5A2P05997 1499 aaPredicted RBP9.69□□□□□ -0.86
PMS1-217ENST00000450931 PLEKHG3A1L390 1219 aa9.69□□□□□ -0.86
PMS1-217ENST00000450931 TCP11L2Q8N4U5 519 aa9.69□□□□□ -0.86
PMS1-217ENST00000450931 OVOS2A0A0G2JMS6 1433 aa9.68□□□□□ -0.86
PMS1-217ENST00000450931 OVOS2A0A0J9YW53 1432 aa9.68□□□□□ -0.86
PMS1-217ENST00000450931 OVOS2Q6IE36 1432 aa9.68□□□□□ -0.86
PMS1-217ENST00000450931 SLIT3O75094 1523 aa9.68□□□□□ -0.86
PMS1-217ENST00000450931 STRN4Q9NRL3 753 aa9.68□□□□□ -0.86
PMS1-217ENST00000450931 RAB3GAP2Q9H2M9 1393 aa9.68□□□□□ -0.86
PMS1-217ENST00000450931 BCL9O00512 1426 aa9.68□□□□□ -0.86
PMS1-217ENST00000450931 CRB1P82279 1406 aa9.68□□□□□ -0.86
PMS1-217ENST00000450931 SBF2Q86WG5 1849 aa9.67□□□□□ -0.86
PMS1-217ENST00000450931 DCAF8L1A6NGE4 600 aa9.67□□□□□ -0.86
PMS1-217ENST00000450931 EVA1CP58658 441 aa9.67□□□□□ -0.86
PMS1-217ENST00000450931 SPON1Q9HCB6 807 aa9.67□□□□□ -0.86
PMS1-217ENST00000450931 CCDC61Q9Y6R9 512 aa9.67□□□□□ -0.86
PMS1-217ENST00000450931 YY1P25490 414 aa9.67□□□□□ -0.86
PMS1-217ENST00000450931 CHRNA2Q15822 529 aa9.67□□□□□ -0.86
PMS1-217ENST00000450931 SRCAPQ6ZRS2 3230 aa9.67□□□□□ -0.86
PMS1-217ENST00000450931 QRICH2Q9H0J4 1663 aa9.66□□□□□ -0.86
PMS1-217ENST00000450931 ACEP12821 1306 aa9.66□□□□□ -0.86
PMS1-217ENST00000450931 DCAF11Q8TEB1 546 aa9.66□□□□□ -0.86
PMS1-217ENST00000450931 KCNQ2O43526 872 aa9.66□□□□□ -0.86
PMS1-217ENST00000450931 ZC3H6P61129 1189 aaKnown RBP9.66□□□□□ -0.86
PMS1-217ENST00000450931 AKAP12Q02952 1782 aa9.65□□□□□ -0.86
PMS1-217ENST00000450931 CDK19Q9BWU1 502 aa9.65□□□□□ -0.86
PMS1-217ENST00000450931 ABCC6O95255 1503 aa9.65□□□□□ -0.86
PMS1-217ENST00000450931 PLSCR1O15162 318 aa9.65□□□□□ -0.86
PMS1-217ENST00000450931 NLRP13Q86W25 1043 aa9.65□□□□□ -0.86
PMS1-217ENST00000450931 LARP1Q6PKG0 1096 aaKnown RBP9.64□□□□□ -0.87
PMS1-217ENST00000450931 AATKQ6ZMQ8 1374 aa9.64□□□□□ -0.87
PMS1-217ENST00000450931 COL18A1P39060 1754 aa9.64□□□□□ -0.87
PMS1-217ENST00000450931 PPP1R1BQ9UD71 204 aaPredicted RBP9.64□□□□□ -0.87
PMS1-217ENST00000450931 ABTB2Q8N961 1025 aa9.64□□□□□ -0.87
PMS1-217ENST00000450931 PPIP5K1Q6PFW1 1433 aa9.64□□□□□ -0.87
PMS1-217ENST00000450931 CDCA7Q9BWT1 371 aaPredicted RBP9.63□□□□□ -0.87
PMS1-217ENST00000450931 USP35Q9P2H5 1018 aa9.63□□□□□ -0.87
PMS1-217ENST00000450931 KDM2AQ9Y2K7 1162 aa9.63□□□□□ -0.87
PMS1-217ENST00000450931 USP6P35125 1406 aa9.62□□□□□ -0.87
PMS1-217ENST00000450931 PIK3C2AO00443 1686 aa9.62□□□□□ -0.87
PMS1-217ENST00000450931 GCP02774 474 aa9.62□□□□□ -0.87
PMS1-217ENST00000450931 MYOM1P52179 1685 aa9.62□□□□□ -0.87
PMS1-217ENST00000450931 BCL11BQ9C0K0 894 aaPredicted RBP9.61□□□□□ -0.87
PMS1-217ENST00000450931 TRPM1Q7Z4N2 1603 aa9.61□□□□□ -0.87
PMS1-217ENST00000450931 NUTM2GQ5VZR2 741 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms