RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 PMFBP1Q8TBY8 1022 aa13.09□□□□□ -0.31
LINC00342-202ENST00000448494 GOLGA6L6A8MZA4 724 aa13.08□□□□□ -0.32
LINC00342-202ENST00000448494 MUM1L1Q5H9M0 696 aa13.08□□□□□ -0.32
LINC00342-202ENST00000448494 CLUAP1Q96AJ1 413 aa13.08□□□□□ -0.32
LINC00342-202ENST00000448494 DONSONQ9NYP3 566 aa13.08□□□□□ -0.32
LINC00342-202ENST00000448494 RAI14Q9P0K7 980 aa13.08□□□□□ -0.32
LINC00342-202ENST00000448494 RAD54L2Q9Y4B4 1467 aa13.08□□□□□ -0.32
LINC00342-202ENST00000448494 USP47Q96K76 1375 aa13.08□□□□□ -0.32
LINC00342-202ENST00000448494 E9PCH4 1651 aa13.08□□□□□ -0.32
LINC00342-202ENST00000448494 CASQ1P31415 396 aa13.07□□□□□ -0.32
LINC00342-202ENST00000448494 PDE3AQ14432 1141 aa13.07□□□□□ -0.32
LINC00342-202ENST00000448494 CLSTN1O94985 981 aa13.07□□□□□ -0.32
LINC00342-202ENST00000448494 POLR3GLQ9BT43 218 aa13.07□□□□□ -0.32
LINC00342-202ENST00000448494 MTUS2Q5JR59 1369 aa13.06□□□□□ -0.32
LINC00342-202ENST00000448494 SSFA2P28290 1259 aa13.06□□□□□ -0.32
LINC00342-202ENST00000448494 MNS1Q8NEH6 495 aa13.06□□□□□ -0.32
LINC00342-202ENST00000448494 TRERF1Q96PN7 1200 aa13.06□□□□□ -0.32
LINC00342-202ENST00000448494 LMBRD1Q9NUN5 540 aa13.06□□□□□ -0.32
LINC00342-202ENST00000448494 TDRD9Q8NDG6 1382 aaKnown RBP13.05□□□□□ -0.32
LINC00342-202ENST00000448494 KDM5CP41229 1560 aa13.05□□□□□ -0.32
LINC00342-202ENST00000448494 MAGI1Q96QZ7 1491 aaPredicted RBP13.04□□□□□ -0.32
LINC00342-202ENST00000448494 ANKRD30AQ9BXX3 1397 aa13.04□□□□□ -0.32
LINC00342-202ENST00000448494 GCC2Q8IWJ2 1684 aa13.04□□□□□ -0.32
LINC00342-202ENST00000448494 UVSSAQ2YD98 709 aa13.03□□□□□ -0.32
LINC00342-202ENST00000448494 PLEKHH1Q9ULM0 1364 aa13.03□□□□□ -0.32
LINC00342-202ENST00000448494 UHRF1BP1LA0JNW5 1464 aa13.03□□□□□ -0.32
LINC00342-202ENST00000448494 MAP2K1Q02750 393 aaPredicted RBP13.03□□□□□ -0.32
LINC00342-202ENST00000448494 GOLIM4O00461 696 aa13.02□□□□□ -0.32
LINC00342-202ENST00000448494 GOLGA6L1Q8N7Z2 621 aa13.02□□□□□ -0.32
LINC00342-202ENST00000448494 MED4Q9NPJ6 270 aa13.02□□□□□ -0.32
LINC00342-202ENST00000448494 PDZRN3Q9UPQ7 1066 aa13.02□□□□□ -0.32
LINC00342-202ENST00000448494 ZNF521Q96K83 1311 aa13.02□□□□□ -0.32
LINC00342-202ENST00000448494 GOLGA2Q08379 1002 aa13.02□□□□□ -0.33
LINC00342-202ENST00000448494 NOL10Q9BSC4 688 aaKnown RBP13.02□□□□□ -0.33
LINC00342-202ENST00000448494 RBM28Q9NW13 759 aaKnown RBP13.02□□□□□ -0.33
LINC00342-202ENST00000448494 EPRSP07814 1512 aaKnown RBP13.02□□□□□ -0.33
LINC00342-202ENST00000448494 ZBTB7CA1YPR0 619 aa13.01□□□□□ -0.33
LINC00342-202ENST00000448494 TPM3P06753 285 aa13.01□□□□□ -0.33
LINC00342-202ENST00000448494 NUCB2P80303 420 aa13.01□□□□□ -0.33
LINC00342-202ENST00000448494 ZNF397Q8NF99 534 aaPredicted RBP13.01□□□□□ -0.33
LINC00342-202ENST00000448494 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.01□□□□□ -0.33
LINC00342-202ENST00000448494 K7ELQ4 463 aaPredicted RBP13.01□□□□□ -0.33
LINC00342-202ENST00000448494 MCTP1Q6DN14 999 aa13.01□□□□□ -0.33
LINC00342-202ENST00000448494 TXLNBQ8N3L3 684 aa13.01□□□□□ -0.33
LINC00342-202ENST00000448494 KIF1BPQ96EK5 621 aa13.01□□□□□ -0.33
LINC00342-202ENST00000448494 GAPVD1Q14C86 1478 aa13.01□□□□□ -0.33
LINC00342-202ENST00000448494 SYNJ2O15056 1496 aa13□□□□□ -0.33
LINC00342-202ENST00000448494 ANKRD30BQ9BXX2 1392 aa13□□□□□ -0.33
LINC00342-202ENST00000448494 KIAA1524Q8TCG1 905 aa13□□□□□ -0.33
LINC00342-202ENST00000448494 CHMP7Q8WUX9 453 aaPredicted RBP13□□□□□ -0.33
LINC00342-202ENST00000448494 FGD5Q6ZNL6 1462 aa13□□□□□ -0.33
LINC00342-202ENST00000448494 SMTNL1A8MU46 457 aa13□□□□□ -0.33
LINC00342-202ENST00000448494 IRF6O14896 467 aa13□□□□□ -0.33
LINC00342-202ENST00000448494 CCDC91Q7Z6B0 441 aa13□□□□□ -0.33
LINC00342-202ENST00000448494 TRMT2AQ8IZ69 625 aaKnown RBP13□□□□□ -0.33
LINC00342-202ENST00000448494 GPATCH11Q8N954 259 aa13□□□□□ -0.33
LINC00342-202ENST00000448494 FAM184AQ8NB25 1140 aa13□□□□□ -0.33
LINC00342-202ENST00000448494 MPHOSPH9Q99550 1183 aa13□□□□□ -0.33
LINC00342-202ENST00000448494 POLKQ9UBT6 870 aa13□□□□□ -0.33
LINC00342-202ENST00000448494 JRKLQ9Y4A0 524 aa13□□□□□ -0.33
LINC00342-202ENST00000448494 NKTRP30414 1462 aaKnown RBP12.99□□□□□ -0.33
LINC00342-202ENST00000448494 GRIN2BQ13224 1484 aa12.99□□□□□ -0.33
LINC00342-202ENST00000448494 MBD5Q9P267 1494 aa12.99□□□□□ -0.33
LINC00342-202ENST00000448494 MYO1CO00159 1063 aa12.99□□□□□ -0.33
LINC00342-202ENST00000448494 TMX1Q9H3N1 280 aa12.99□□□□□ -0.33
LINC00342-202ENST00000448494 TSPY26PQ9H489 355 aa12.99□□□□□ -0.33
LINC00342-202ENST00000448494 SH3BP1Q9Y3L3 701 aa12.99□□□□□ -0.33
LINC00342-202ENST00000448494 KIF14Q15058 1648 aa12.99□□□□□ -0.33
LINC00342-202ENST00000448494 SLFN5Q08AF3 891 aa12.99□□□□□ -0.33
LINC00342-202ENST00000448494 PCF11O94913 1555 aaKnown RBP12.99□□□□□ -0.33
LINC00342-202ENST00000448494 SYCE3A1L190 88 aa12.98□□□□□ -0.33
LINC00342-202ENST00000448494 TDO2P48775 406 aa12.98□□□□□ -0.33
LINC00342-202ENST00000448494 CXorf56Q9H5V9 222 aa12.98□□□□□ -0.33
LINC00342-202ENST00000448494 ZNF446Q9NWS9 450 aa12.98□□□□□ -0.33
LINC00342-202ENST00000448494 SHROOM2Q13796 1616 aa12.98□□□□□ -0.33
LINC00342-202ENST00000448494 A0A1B0GUL7 405 aa12.98□□□□□ -0.33
LINC00342-202ENST00000448494 MBD3O95983 291 aa12.98□□□□□ -0.33
LINC00342-202ENST00000448494 GSCP56915 257 aaPredicted RBP12.98□□□□□ -0.33
LINC00342-202ENST00000448494 RNF217Q8TC41 542 aa12.98□□□□□ -0.33
LINC00342-202ENST00000448494 GPT2Q8TD30 523 aa12.98□□□□□ -0.33
LINC00342-202ENST00000448494 TTC12Q9H892 705 aaPredicted RBP12.98□□□□□ -0.33
LINC00342-202ENST00000448494 KIF27Q86VH2 1401 aa12.97□□□□□ -0.33
LINC00342-202ENST00000448494 CYP2E1P05181 493 aaPredicted RBP12.97□□□□□ -0.33
LINC00342-202ENST00000448494 ZNF853P0CG23 659 aa12.97□□□□□ -0.33
LINC00342-202ENST00000448494 ATP2B1P20020 1258 aa12.97□□□□□ -0.33
LINC00342-202ENST00000448494 SLFNL1Q499Z3 407 aa12.97□□□□□ -0.33
LINC00342-202ENST00000448494 NBPF11Q86T75 865 aa12.97□□□□□ -0.33
LINC00342-202ENST00000448494 C17orf53Q8N3J3 647 aaPredicted RBP12.97□□□□□ -0.33
LINC00342-202ENST00000448494 CWC15Q9P013 229 aaKnown RBP12.97□□□□□ -0.33
LINC00342-202ENST00000448494 PBRM1Q86U86 1689 aa12.97□□□□□ -0.33
LINC00342-202ENST00000448494 RWDD1Q9H446 243 aaPredicted RBP12.96□□□□□ -0.33
LINC00342-202ENST00000448494 DEF6Q9H4E7 631 aa12.96□□□□□ -0.33
LINC00342-202ENST00000448494 ATG3Q9NT62 314 aa12.96□□□□□ -0.33
LINC00342-202ENST00000448494 TMEM63CQ9P1W3 806 aa12.96□□□□□ -0.33
LINC00342-202ENST00000448494 SYT10Q6XYQ8 523 aa12.96□□□□□ -0.33
LINC00342-202ENST00000448494 RBM27Q9P2N5 1060 aaKnown RBP12.96□□□□□ -0.33
LINC00342-202ENST00000448494 SUFUQ9UMX1 484 aa12.96□□□□□ -0.33
LINC00342-202ENST00000448494 PAXBP1Q9Y5B6 917 aa12.96□□□□□ -0.33
LINC00342-202ENST00000448494 FYCO1Q9BQS8 1478 aa12.96□□□□□ -0.34
LINC00342-202ENST00000448494 CALRP27797 417 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms