RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 SIRT1Q96EB6 747 aa18.33■□□□□ 0.52
SSR4-205ENST00000447375 THSD7AQ9UPZ6 1657 aa18.33■□□□□ 0.52
SSR4-205ENST00000447375 COL14A1Q05707 1796 aaKnown RBP18.32■□□□□ 0.52
SSR4-205ENST00000447375 ZNF784Q8NCA9 323 aaPredicted RBP18.32■□□□□ 0.52
SSR4-205ENST00000447375 RGPD8O14715 1765 aaPredicted RBP18.32■□□□□ 0.52
SSR4-205ENST00000447375 SPATA31A1Q5TZJ5 1347 aa18.31■□□□□ 0.52
SSR4-205ENST00000447375 RGL3Q3MIN7 710 aa18.3■□□□□ 0.52
SSR4-205ENST00000447375 YTHDC2Q9H6S0 1430 aaKnown RBP18.3■□□□□ 0.52
SSR4-205ENST00000447375 PRDM11Q9NQV5 511 aa18.29■□□□□ 0.52
SSR4-205ENST00000447375 KNDC1Q76NI1 1749 aa18.29■□□□□ 0.52
SSR4-205ENST00000447375 PDE3BQ13370 1112 aa18.28■□□□□ 0.52
SSR4-205ENST00000447375 TRIM26Q12899 539 aaPredicted RBP18.27■□□□□ 0.52
SSR4-205ENST00000447375 RREB1Q92766 1687 aa18.27■□□□□ 0.52
SSR4-205ENST00000447375 SAFB2Q14151 953 aaKnown RBP eCLIP18.26■□□□□ 0.51
SSR4-205ENST00000447375 ANKRD30BQ9BXX2 1392 aa18.26■□□□□ 0.51
SSR4-205ENST00000447375 NUP188Q5SRE5 1749 aa18.26■□□□□ 0.51
SSR4-205ENST00000447375 STRN4Q9NRL3 753 aa18.25■□□□□ 0.51
SSR4-205ENST00000447375 GPRASP1Q5JY77 1395 aa18.25■□□□□ 0.51
SSR4-205ENST00000447375 CAMTA1Q9Y6Y1 1673 aa18.25■□□□□ 0.51
SSR4-205ENST00000447375 C1QTNF8P60827 252 aa18.24■□□□□ 0.51
SSR4-205ENST00000447375 USP35Q9P2H5 1018 aa18.24■□□□□ 0.51
SSR4-205ENST00000447375 PRAM1Q96QH2 718 aa18.23■□□□□ 0.51
SSR4-205ENST00000447375 BARGINQ6ZT62 677 aa18.22■□□□□ 0.51
SSR4-205ENST00000447375 PIK3C2GO75747 1445 aa18.22■□□□□ 0.51
SSR4-205ENST00000447375 ANKARQ7Z5J8 1434 aa18.22■□□□□ 0.51
SSR4-205ENST00000447375 TRPM3Q9HCF6 1732 aaPredicted RBP18.21■□□□□ 0.51
SSR4-205ENST00000447375 PAK3O75914 559 aaPredicted RBP18.21■□□□□ 0.51
SSR4-205ENST00000447375 CHRNA2Q15822 529 aa18.21■□□□□ 0.51
SSR4-205ENST00000447375 C14orf93Q9H972 538 aaKnown RBP18.21■□□□□ 0.51
SSR4-205ENST00000447375 DHX57Q6P158 1386 aaKnown RBP18.2■□□□□ 0.5
SSR4-205ENST00000447375 EVA1CP58658 441 aa18.2■□□□□ 0.5
SSR4-205ENST00000447375 POGKQ9P215 609 aa18.2■□□□□ 0.5
SSR4-205ENST00000447375 KIAA0232Q92628 1395 aa18.19■□□□□ 0.5
SSR4-205ENST00000447375 ALS2Q96Q42 1657 aa18.19■□□□□ 0.5
SSR4-205ENST00000447375 SPATA31E1Q6ZUB1 1445 aa18.18■□□□□ 0.5
SSR4-205ENST00000447375 NGDNQ8NEJ9 315 aaKnown RBP18.17■□□□□ 0.5
SSR4-205ENST00000447375 UTRNP46939 3433 aa18.17■□□□□ 0.5
SSR4-205ENST00000447375 ZC3H6P61129 1189 aaKnown RBP18.16■□□□□ 0.5
SSR4-205ENST00000447375 CFAP70Q5T0N1 1121 aa18.16■□□□□ 0.5
SSR4-205ENST00000447375 ZBTB7AO95365 584 aa18.15■□□□□ 0.5
SSR4-205ENST00000447375 TCP11L2Q8N4U5 519 aa18.15■□□□□ 0.5
SSR4-205ENST00000447375 C11orf95C9JLR9 678 aaPredicted RBP18.14■□□□□ 0.49
SSR4-205ENST00000447375 HIRIP3Q9BW71 556 aaPredicted RBP18.14■□□□□ 0.49
SSR4-205ENST00000447375 PDGFDQ9GZP0 370 aaPredicted RBP18.14■□□□□ 0.49
SSR4-205ENST00000447375 PRR36Q9H6K5 1346 aa18.14■□□□□ 0.49
SSR4-205ENST00000447375 NRKQ7Z2Y5 1582 aa18.13■□□□□ 0.49
SSR4-205ENST00000447375 CRYBG1Q9Y4K1 1723 aa18.13■□□□□ 0.49
SSR4-205ENST00000447375 PLSCR1O15162 318 aa18.13■□□□□ 0.49
SSR4-205ENST00000447375 PTGER2P43116 358 aa18.13■□□□□ 0.49
SSR4-205ENST00000447375 LARP1Q6PKG0 1096 aaKnown RBP18.13■□□□□ 0.49
SSR4-205ENST00000447375 SYT17Q9BSW7 474 aa18.13■□□□□ 0.49
SSR4-205ENST00000447375 ANO8Q9HCE9 1232 aaPredicted RBP18.13■□□□□ 0.49
SSR4-205ENST00000447375 ATF5Q9Y2D1 282 aaPredicted RBP18.13■□□□□ 0.49
SSR4-205ENST00000447375 SSH2Q76I76 1423 aa18.13■□□□□ 0.49
SSR4-205ENST00000447375 FHDC1Q9C0D6 1143 aaPredicted RBP18.12■□□□□ 0.49
SSR4-205ENST00000447375 THRAP3Q9Y2W1 955 aaKnown RBP18.11■□□□□ 0.49
SSR4-205ENST00000447375 EIF3AQ14152 1382 aaKnown RBP18.11■□□□□ 0.49
SSR4-205ENST00000447375 NUTM2GQ5VZR2 741 aa18.1■□□□□ 0.49
SSR4-205ENST00000447375 BCL11BQ9C0K0 894 aaPredicted RBP18.1■□□□□ 0.49
SSR4-205ENST00000447375 MINK1Q8N4C8 1332 aaPredicted RBP18.09■□□□□ 0.49
SSR4-205ENST00000447375 WASLO00401 505 aaPredicted RBP18.08■□□□□ 0.48
SSR4-205ENST00000447375 CASZ1Q86V15 1759 aa18.08■□□□□ 0.48
SSR4-205ENST00000447375 DLC1Q96QB1 1528 aa18.08■□□□□ 0.48
SSR4-205ENST00000447375 MYOM1P52179 1685 aa18.07■□□□□ 0.48
SSR4-205ENST00000447375 GIGYF1O75420 1035 aaPredicted RBP18.06■□□□□ 0.48
SSR4-205ENST00000447375 PROM2Q8N271 834 aa18.06■□□□□ 0.48
SSR4-205ENST00000447375 TRAK1Q9UPV9 953 aa18.06■□□□□ 0.48
SSR4-205ENST00000447375 TULP4Q9NRJ4 1543 aa18.06■□□□□ 0.48
SSR4-205ENST00000447375 OVOS2A0A0G2JMS6 1433 aa18.05■□□□□ 0.48
SSR4-205ENST00000447375 OVOS2A0A0J9YW53 1432 aa18.05■□□□□ 0.48
SSR4-205ENST00000447375 OVOS2Q6IE36 1432 aa18.05■□□□□ 0.48
SSR4-205ENST00000447375 STK32BQ9NY57 414 aa18.04■□□□□ 0.48
SSR4-205ENST00000447375 PHRF1Q9P1Y6 1649 aaKnown RBP18.03■□□□□ 0.48
SSR4-205ENST00000447375 PTF1AQ7RTS3 328 aa18.03■□□□□ 0.48
SSR4-205ENST00000447375 MTFR1LQ9H019 292 aa18.03■□□□□ 0.48
SSR4-205ENST00000447375 CHD4Q14839 1912 aa18.03■□□□□ 0.48
SSR4-205ENST00000447375 RGPD3A6NKT7 1758 aaPredicted RBP18.02■□□□□ 0.48
SSR4-205ENST00000447375 RGPD4Q7Z3J3 1758 aa18.02■□□□□ 0.48
SSR4-205ENST00000447375 STAC3Q96MF2 364 aa18.02■□□□□ 0.48
SSR4-205ENST00000447375 ATP7BP35670 1465 aa18.01■□□□□ 0.47
SSR4-205ENST00000447375 SLC15A2Q16348 729 aa18.01■□□□□ 0.47
SSR4-205ENST00000447375 DDB1Q16531 1140 aa18.01■□□□□ 0.47
SSR4-205ENST00000447375 NUDT16Q96DE0 195 aaKnown RBP18.01■□□□□ 0.47
SSR4-205ENST00000447375 GPR162Q16538 588 aa18■□□□□ 0.47
SSR4-205ENST00000447375 SGIP1Q9BQI5 828 aa18■□□□□ 0.47
SSR4-205ENST00000447375 CPDO75976 1380 aa18■□□□□ 0.47
SSR4-205ENST00000447375 PARP4Q9UKK3 1724 aaKnown RBP18■□□□□ 0.47
SSR4-205ENST00000447375 TXNRD1Q16881 649 aa17.99■□□□□ 0.47
SSR4-205ENST00000447375 ABTB2Q8N961 1025 aa17.99■□□□□ 0.47
SSR4-205ENST00000447375 DCAF11Q8TEB1 546 aa17.99■□□□□ 0.47
SSR4-205ENST00000447375 ARXQ96QS3 562 aa17.99■□□□□ 0.47
SSR4-205ENST00000447375 PEAK1Q9H792 1746 aa17.98■□□□□ 0.47
SSR4-205ENST00000447375 PCGF6Q9BYE7 350 aa17.97■□□□□ 0.47
SSR4-205ENST00000447375 CRB1P82279 1406 aa17.97■□□□□ 0.47
SSR4-205ENST00000447375 CEP350Q5VT06 3117 aa17.96■□□□□ 0.47
SSR4-205ENST00000447375 LMO7Q8WWI1 1683 aa17.96■□□□□ 0.47
SSR4-205ENST00000447375 KDM2AQ9Y2K7 1162 aa17.96■□□□□ 0.47
SSR4-205ENST00000447375 ACEP12821 1306 aa17.96■□□□□ 0.46
SSR4-205ENST00000447375 ADGRB1O14514 1584 aa17.96■□□□□ 0.46
SSR4-205ENST00000447375 COL5A2P05997 1499 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms