RNA–Protein interactions for RNA: ENST00000445077.1

RBMS3-208, Transcript of RNA binding motif single stranded interacting protein 3, human

TSL 3

Gene RBMS3, Length 448 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBMS3-208	ENST00000445077	ATF7IP	Q6VMQ6	1270 aa		10.9	□□□□□ -0.66
RBMS3-208	ENST00000445077	SYCP2	Q9BX26	1530 aa		10.89	□□□□□ -0.67
RBMS3-208	ENST00000445077	EVC2	Q86UK5	1308 aa		10.89	□□□□□ -0.67
RBMS3-208	ENST00000445077	NCL	P19338	710 aa	Known RBP	10.89	□□□□□ -0.67
RBMS3-208	ENST00000445077	PPP1R9B	Q96SB3	815 aa		10.89	□□□□□ -0.67
RBMS3-208	ENST00000445077	RERE	Q9P2R6	1566 aa		10.89	□□□□□ -0.67
RBMS3-208	ENST00000445077	RAB3GAP1	Q15042	981 aa		10.88	□□□□□ -0.67
RBMS3-208	ENST00000445077	ZSCAN30	Q86W11	494 aa		10.88	□□□□□ -0.67
RBMS3-208	ENST00000445077	RRAGD	Q9NQL2	400 aa	Predicted RBP	10.88	□□□□□ -0.67
RBMS3-208	ENST00000445077	SMC4	Q9NTJ3	1288 aa		10.88	□□□□□ -0.67
RBMS3-208	ENST00000445077	PCDHB15	Q9Y5E8	787 aa		10.88	□□□□□ -0.67
RBMS3-208	ENST00000445077	MYO5C	Q9NQX4	1742 aa		10.87	□□□□□ -0.67
RBMS3-208	ENST00000445077	CDC42BPB	Q9Y5S2	1711 aa		10.87	□□□□□ -0.67
RBMS3-208	ENST00000445077	SETBP1	Q9Y6X0	1596 aa		10.87	□□□□□ -0.67
RBMS3-208	ENST00000445077	MFAP1	P55081	439 aa	Known RBP	10.87	□□□□□ -0.67
RBMS3-208	ENST00000445077	NUCB1	Q02818	461 aa		10.87	□□□□□ -0.67
RBMS3-208	ENST00000445077	KLHL40	Q2TBA0	621 aa		10.87	□□□□□ -0.67
RBMS3-208	ENST00000445077	PROM2	Q8N271	834 aa		10.87	□□□□□ -0.67
RBMS3-208	ENST00000445077	KIF24	Q5T7B8	1368 aa		10.87	□□□□□ -0.67
RBMS3-208	ENST00000445077	SHROOM2	Q13796	1616 aa		10.87	□□□□□ -0.67
RBMS3-208	ENST00000445077	SPHKAP	Q2M3C7	1700 aa		10.87	□□□□□ -0.67
RBMS3-208	ENST00000445077		K7ELQ4	463 aa	Predicted RBP	10.86	□□□□□ -0.67
RBMS3-208	ENST00000445077	SEC24B	O95487	1268 aa		10.86	□□□□□ -0.67
RBMS3-208	ENST00000445077	MCM2	P49736	904 aa		10.86	□□□□□ -0.67
RBMS3-208	ENST00000445077	LMOD3	Q0VAK6	560 aa		10.86	□□□□□ -0.67
RBMS3-208	ENST00000445077	RABEP1	Q15276	862 aa		10.86	□□□□□ -0.67
RBMS3-208	ENST00000445077	SYAP1	Q96A49	352 aa	Predicted RBP	10.86	□□□□□ -0.67
RBMS3-208	ENST00000445077	UHRF1BP1L	A0JNW5	1464 aa		10.86	□□□□□ -0.67
RBMS3-208	ENST00000445077	FANCA	O15360	1455 aa		10.86	□□□□□ -0.67
RBMS3-208	ENST00000445077	NCOA3	Q9Y6Q9	1424 aa		10.85	□□□□□ -0.67
RBMS3-208	ENST00000445077	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
RBMS3-208	ENST00000445077	VGF	O15240	615 aa	Predicted RBP	10.85	□□□□□ -0.67
RBMS3-208	ENST00000445077	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.85	□□□□□ -0.67
RBMS3-208	ENST00000445077	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
RBMS3-208	ENST00000445077	CHD1L	Q86WJ1	897 aa		10.85	□□□□□ -0.67
RBMS3-208	ENST00000445077	REM2	Q8IYK8	340 aa	Predicted RBP	10.85	□□□□□ -0.67
RBMS3-208	ENST00000445077	TERF2IP	Q9NYB0	399 aa		10.85	□□□□□ -0.67
RBMS3-208	ENST00000445077	NLRP1	Q9C000	1473 aa		10.85	□□□□□ -0.67
RBMS3-208	ENST00000445077	TET3	O43151	1660 aa		10.85	□□□□□ -0.67
RBMS3-208	ENST00000445077	USP32	Q8NFA0	1604 aa		10.84	□□□□□ -0.67
RBMS3-208	ENST00000445077	CEP152	O94986	1710 aa		10.84	□□□□□ -0.67
RBMS3-208	ENST00000445077	OFD1	O75665	1012 aa		10.84	□□□□□ -0.67
RBMS3-208	ENST00000445077	NASP	P49321	788 aa	Predicted RBP	10.84	□□□□□ -0.67
RBMS3-208	ENST00000445077	MTHFS	P49914	203 aa		10.84	□□□□□ -0.67
RBMS3-208	ENST00000445077	ITPRIP	Q8IWB1	547 aa		10.84	□□□□□ -0.67
RBMS3-208	ENST00000445077	CARD14	Q9BXL6	1004 aa		10.84	□□□□□ -0.67
RBMS3-208	ENST00000445077	C14orf93	Q9H972	538 aa	Known RBP	10.84	□□□□□ -0.67
RBMS3-208	ENST00000445077	ERVK-7	P63135	1459 aa		10.84	□□□□□ -0.67
RBMS3-208	ENST00000445077	ZNF518A	Q6AHZ1	1483 aa		10.83	□□□□□ -0.68
RBMS3-208	ENST00000445077	ST18	O60284	1047 aa		10.83	□□□□□ -0.68
RBMS3-208	ENST00000445077	FCHSD2	O94868	740 aa		10.83	□□□□□ -0.68
RBMS3-208	ENST00000445077	PHF14	O94880	888 aa		10.83	□□□□□ -0.68
RBMS3-208	ENST00000445077	DDIT3	P35638	169 aa		10.83	□□□□□ -0.68
RBMS3-208	ENST00000445077	ZNF445	P59923	1031 aa		10.83	□□□□□ -0.68
RBMS3-208	ENST00000445077	SKAP1	Q86WV1	359 aa		10.83	□□□□□ -0.68
RBMS3-208	ENST00000445077	PKNOX2	Q96KN3	472 aa		10.83	□□□□□ -0.68
RBMS3-208	ENST00000445077	API5	Q9BZZ5	524 aa	Known RBP	10.83	□□□□□ -0.68
RBMS3-208	ENST00000445077	ZBTB40	Q9NUA8	1239 aa		10.83	□□□□□ -0.68
RBMS3-208	ENST00000445077	MYO3A	Q8NEV4	1616 aa		10.83	□□□□□ -0.68
RBMS3-208	ENST00000445077	ANKRD36B	Q8N2N9	1353 aa		10.82	□□□□□ -0.68
RBMS3-208	ENST00000445077	CDC45	O75419	566 aa		10.82	□□□□□ -0.68
RBMS3-208	ENST00000445077	LETM1	O95202	739 aa	Predicted RBP	10.82	□□□□□ -0.68
RBMS3-208	ENST00000445077	MBD3	O95983	291 aa		10.82	□□□□□ -0.68
RBMS3-208	ENST00000445077	PDIA4	P13667	645 aa	Known RBP	10.82	□□□□□ -0.68
RBMS3-208	ENST00000445077	TNPO1	Q92973	898 aa	Known RBP	10.82	□□□□□ -0.68
RBMS3-208	ENST00000445077	GZF1	Q9H116	711 aa	Predicted RBP	10.82	□□□□□ -0.68
RBMS3-208	ENST00000445077	CCDC39	Q9UFE4	941 aa		10.82	□□□□□ -0.68
RBMS3-208	ENST00000445077	DDX49	Q9Y6V7	483 aa	Known RBP	10.82	□□□□□ -0.68
RBMS3-208	ENST00000445077	NSD3	Q9BZ95	1437 aa		10.82	□□□□□ -0.68
RBMS3-208	ENST00000445077	NRXN1	Q9ULB1	1477 aa		10.81	□□□□□ -0.68
RBMS3-208	ENST00000445077	MAP3K4	Q9Y6R4	1608 aa		10.81	□□□□□ -0.68
RBMS3-208	ENST00000445077	EPB41L2	O43491	1005 aa	Known RBP	10.81	□□□□□ -0.68
RBMS3-208	ENST00000445077	NEUROD2	Q15784	382 aa		10.81	□□□□□ -0.68
RBMS3-208	ENST00000445077	CFAP70	Q5T0N1	1121 aa		10.81	□□□□□ -0.68
RBMS3-208	ENST00000445077	IQSEC2	Q5JU85	1478 aa		10.81	□□□□□ -0.68
RBMS3-208	ENST00000445077	ZNF500	O60304	480 aa	Predicted RBP	10.8	□□□□□ -0.68
RBMS3-208	ENST00000445077	REC8	O95072	547 aa		10.8	□□□□□ -0.68
RBMS3-208	ENST00000445077	TMPO	P42166	694 aa	Known RBP	10.8	□□□□□ -0.68
RBMS3-208	ENST00000445077	TNNT2	P45379	298 aa	Predicted RBP	10.8	□□□□□ -0.68
RBMS3-208	ENST00000445077	GNAI1	P63096	354 aa		10.8	□□□□□ -0.68
RBMS3-208	ENST00000445077	INTS3	Q68E01	1043 aa	Known RBP	10.8	□□□□□ -0.68
RBMS3-208	ENST00000445077	ARHGAP31	Q2M1Z3	1444 aa		10.8	□□□□□ -0.68
RBMS3-208	ENST00000445077	TRAPPC8	Q9Y2L5	1435 aa		10.8	□□□□□ -0.68
RBMS3-208	ENST00000445077	MED14	O60244	1454 aa		10.8	□□□□□ -0.68
RBMS3-208	ENST00000445077	ABCC1	P33527	1531 aa		10.79	□□□□□ -0.68
RBMS3-208	ENST00000445077	ATAD2	Q6PL18	1390 aa		10.79	□□□□□ -0.68
RBMS3-208	ENST00000445077	ASXL2	Q76L83	1435 aa		10.79	□□□□□ -0.68
RBMS3-208	ENST00000445077	YEATS2	Q9ULM3	1422 aa		10.79	□□□□□ -0.68
RBMS3-208	ENST00000445077	DYNC1I1	O14576	645 aa		10.79	□□□□□ -0.68
RBMS3-208	ENST00000445077	TPM3	P06753	285 aa		10.79	□□□□□ -0.68
RBMS3-208	ENST00000445077	HMGN5	P82970	282 aa	Known RBP	10.79	□□□□□ -0.68
RBMS3-208	ENST00000445077	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	10.79	□□□□□ -0.68
RBMS3-208	ENST00000445077	VSIG10	Q8N0Z9	540 aa		10.79	□□□□□ -0.68
RBMS3-208	ENST00000445077	FAM184A	Q8NB25	1140 aa		10.79	□□□□□ -0.68
RBMS3-208	ENST00000445077	DEPDC5	O75140	1603 aa		10.79	□□□□□ -0.68
RBMS3-208	ENST00000445077	LMTK2	Q8IWU2	1503 aa		10.79	□□□□□ -0.68
RBMS3-208	ENST00000445077	VWDE	Q8N2E2	1590 aa		10.78	□□□□□ -0.68
RBMS3-208	ENST00000445077	KIF3B	O15066	747 aa		10.78	□□□□□ -0.68
RBMS3-208	ENST00000445077	TRIM27	P14373	513 aa		10.78	□□□□□ -0.68
RBMS3-208	ENST00000445077	MCC	P23508	829 aa		10.78	□□□□□ -0.68

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