RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 MKL1Q969V6 931 aa5.18□□□□□ -1.58
UBR3-206ENST00000444475 SPC25Q9HBM1 224 aa5.18□□□□□ -1.58
UBR3-206ENST00000444475 DMGDHQ9UI17 866 aaKnown RBP5.18□□□□□ -1.58
UBR3-206ENST00000444475 ENPP3O14638 875 aa5.17□□□□□ -1.58
UBR3-206ENST00000444475 SCAMP3O14828 347 aaKnown RBP5.17□□□□□ -1.58
UBR3-206ENST00000444475 TMEM164Q5U3C3 297 aa5.17□□□□□ -1.58
UBR3-206ENST00000444475 ERICH6BQ5W0A0 696 aa5.17□□□□□ -1.58
UBR3-206ENST00000444475 ZNF280DQ6N043 979 aa5.17□□□□□ -1.58
UBR3-206ENST00000444475 TSPAN18Q96SJ8 248 aa5.17□□□□□ -1.58
UBR3-206ENST00000444475 POLR3EQ9NVU0 708 aa5.17□□□□□ -1.58
UBR3-206ENST00000444475 UBE4AQ14139 1066 aa5.17□□□□□ -1.58
UBR3-206ENST00000444475 WDR78Q5VTH9 848 aa5.17□□□□□ -1.58
UBR3-206ENST00000444475 CXorf38Q8TB03 319 aa5.17□□□□□ -1.58
UBR3-206ENST00000444475 IFT57Q9NWB7 429 aa5.17□□□□□ -1.58
UBR3-206ENST00000444475 LMOD1P29536 600 aaPredicted RBP5.17□□□□□ -1.58
UBR3-206ENST00000444475 CCAR1Q8IX12 1150 aaKnown RBP5.17□□□□□ -1.58
UBR3-206ENST00000444475 HELBQ8NG08 1087 aaPredicted RBP5.17□□□□□ -1.58
UBR3-206ENST00000444475 GJD4Q96KN9 370 aaPredicted RBP5.17□□□□□ -1.58
UBR3-206ENST00000444475 BIRC2Q13490 618 aa5.16□□□□□ -1.58
UBR3-206ENST00000444475 FMNL3Q8IVF7 1028 aa5.16□□□□□ -1.58
UBR3-206ENST00000444475 RASEFQ8IZ41 740 aa5.16□□□□□ -1.58
UBR3-206ENST00000444475 SVIPQ8NHG7 77 aa5.16□□□□□ -1.58
UBR3-206ENST00000444475 C8orf48Q96LL4 319 aa5.16□□□□□ -1.58
UBR3-206ENST00000444475 PHOX2BQ99453 314 aa5.16□□□□□ -1.58
UBR3-206ENST00000444475 EMILIN3Q9NT22 766 aa5.16□□□□□ -1.58
UBR3-206ENST00000444475 MAFBQ9Y5Q3 323 aaPredicted RBP5.16□□□□□ -1.58
UBR3-206ENST00000444475 INO80BQ9C086 356 aaPredicted RBP5.16□□□□□ -1.58
UBR3-206ENST00000444475 MAP3K20Q9NYL2 800 aaKnown RBP5.16□□□□□ -1.58
UBR3-206ENST00000444475 NUB1Q9Y5A7 615 aa5.16□□□□□ -1.58
UBR3-206ENST00000444475 WDHD1O75717 1129 aaPredicted RBP5.16□□□□□ -1.58
UBR3-206ENST00000444475 IBSPP21815 317 aaPredicted RBP5.16□□□□□ -1.58
UBR3-206ENST00000444475 COPB2P35606 906 aa5.16□□□□□ -1.58
UBR3-206ENST00000444475 C9orf131Q5VYM1 1079 aa5.16□□□□□ -1.58
UBR3-206ENST00000444475 NBPF11Q86T75 865 aa5.16□□□□□ -1.58
UBR3-206ENST00000444475 GEMIN8Q9NWZ8 242 aaKnown RBP5.16□□□□□ -1.58
UBR3-206ENST00000444475 TFIP11Q9UBB9 837 aaKnown RBP5.16□□□□□ -1.58
UBR3-206ENST00000444475 SPDYE16A6NNV3 312 aaPredicted RBP5.15□□□□□ -1.58
UBR3-206ENST00000444475 MSH5O43196 834 aa5.15□□□□□ -1.58
UBR3-206ENST00000444475 PYGBP11216 843 aa5.15□□□□□ -1.58
UBR3-206ENST00000444475 AMPD3Q01432 767 aa5.15□□□□□ -1.58
UBR3-206ENST00000444475 NT5DC4Q86YG4 428 aa5.15□□□□□ -1.58
UBR3-206ENST00000444475 STK32AQ8WU08 396 aa5.15□□□□□ -1.58
UBR3-206ENST00000444475 SCINQ9Y6U3 715 aa5.15□□□□□ -1.58
UBR3-206ENST00000444475 FAM163BP0C2L3 166 aa5.15□□□□□ -1.59
UBR3-206ENST00000444475 CALRP27797 417 aaKnown RBP5.15□□□□□ -1.59
UBR3-206ENST00000444475 CLK2P49760 499 aaKnown RBP5.15□□□□□ -1.59
UBR3-206ENST00000444475 RASSF7Q02833 373 aa5.15□□□□□ -1.59
UBR3-206ENST00000444475 FAM69CQ0P6D2 419 aa5.15□□□□□ -1.59
UBR3-206ENST00000444475 COL19A1Q14993 1142 aa5.15□□□□□ -1.59
UBR3-206ENST00000444475 MAP9Q49MG5 647 aa5.15□□□□□ -1.59
UBR3-206ENST00000444475 KANK4Q5T7N3 995 aaPredicted RBP5.15□□□□□ -1.59
UBR3-206ENST00000444475 CASS4Q9NQ75 786 aa5.15□□□□□ -1.59
UBR3-206ENST00000444475 TYW1Q9NV66 732 aaKnown RBP5.15□□□□□ -1.59
UBR3-206ENST00000444475 TTF2Q9UNY4 1162 aaKnown RBP5.15□□□□□ -1.59
UBR3-206ENST00000444475 SH3BP1Q9Y3L3 701 aa5.15□□□□□ -1.59
UBR3-206ENST00000444475 COL6A1P12109 1028 aa5.15□□□□□ -1.59
UBR3-206ENST00000444475 CSPP1Q1MSJ5 1256 aa5.15□□□□□ -1.59
UBR3-206ENST00000444475 TTC36A6NLP5 189 aa5.14□□□□□ -1.59
UBR3-206ENST00000444475 SERPINB4P48594 390 aa5.14□□□□□ -1.59
UBR3-206ENST00000444475 CEP63Q96MT8 703 aa5.14□□□□□ -1.59
UBR3-206ENST00000444475 CHMP4BQ9H444 224 aaKnown RBP5.14□□□□□ -1.59
UBR3-206ENST00000444475 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.14□□□□□ -1.597e-11■■■■■ 260.8
UBR3-206ENST00000444475 THRAP3Q9Y2W1 955 aaKnown RBP5.14□□□□□ -1.59
UBR3-206ENST00000444475 MRPL42Q9Y6G3 142 aaKnown RBP5.14□□□□□ -1.59
UBR3-206ENST00000444475 SOX12O15370 315 aa5.14□□□□□ -1.59
UBR3-206ENST00000444475 PDGFRBP09619 1106 aa5.14□□□□□ -1.59
UBR3-206ENST00000444475 OSBPP22059 807 aa5.14□□□□□ -1.59
UBR3-206ENST00000444475 ECM1Q16610 540 aa5.14□□□□□ -1.59
UBR3-206ENST00000444475 EFCAB2Q5VUJ9 269 aa5.14□□□□□ -1.59
UBR3-206ENST00000444475 RELTQ969Z4 430 aa5.14□□□□□ -1.59
UBR3-206ENST00000444475 BEGAINQ9BUH8 593 aa5.14□□□□□ -1.59
UBR3-206ENST00000444475 TGIF2Q9GZN2 237 aa5.14□□□□□ -1.59
UBR3-206ENST00000444475 IQSEC3Q9UPP2 1182 aaPredicted RBP5.14□□□□□ -1.59
UBR3-206ENST00000444475 PRC1O43663 620 aa5.14□□□□□ -1.59
UBR3-206ENST00000444475 GIGYF1O75420 1035 aaPredicted RBP5.14□□□□□ -1.59
UBR3-206ENST00000444475 SSTR3P32745 418 aaPredicted RBP5.14□□□□□ -1.59
UBR3-206ENST00000444475 GPCPD1Q9NPB8 672 aa5.14□□□□□ -1.59
UBR3-206ENST00000444475 ATP2B1P20020 1258 aa5.13□□□□□ -1.59
UBR3-206ENST00000444475 DEKP35659 375 aaKnown RBP5.13□□□□□ -1.59
UBR3-206ENST00000444475 ZNF622Q969S3 477 aaKnown RBP eCLIP5.13□□□□□ -1.594e-7■■□□□ 11.4
UBR3-206ENST00000444475 G3BP2Q9UN86 482 aaKnown RBP5.13□□□□□ -1.59
UBR3-206ENST00000444475 DPYSL4O14531 572 aa5.13□□□□□ -1.59
UBR3-206ENST00000444475 POU5F1Q01860 360 aaKnown RBP5.13□□□□□ -1.59
UBR3-206ENST00000444475 FAM161AQ3B820 660 aa5.13□□□□□ -1.59
UBR3-206ENST00000444475 NBPF1Q3BBV0 1214 aa5.13□□□□□ -1.59
UBR3-206ENST00000444475 CCSAPQ6IQ19 270 aaPredicted RBP5.13□□□□□ -1.59
UBR3-206ENST00000444475 SALL2Q9Y467 1007 aaPredicted RBP5.13□□□□□ -1.59
UBR3-206ENST00000444475 PPP1R3GB7ZBB8 358 aa5.13□□□□□ -1.59
UBR3-206ENST00000444475 ANP32EQ9BTT0 268 aa5.13□□□□□ -1.59
UBR3-206ENST00000444475 OSBPL2Q9H1P3 480 aa5.13□□□□□ -1.59
UBR3-206ENST00000444475 ZSWIM4Q9H7M6 989 aa5.13□□□□□ -1.59
UBR3-206ENST00000444475 AVENQ9NQS1 362 aaPredicted RBP5.13□□□□□ -1.59
UBR3-206ENST00000444475 ZBTB12Q9Y330 459 aaPredicted RBP5.13□□□□□ -1.59
UBR3-206ENST00000444475 DHX8Q14562 1220 aaKnown RBP5.12□□□□□ -1.59
UBR3-206ENST00000444475 ICE2Q659A1 982 aa5.12□□□□□ -1.59
UBR3-206ENST00000444475 MKRN1Q9UHC7 482 aaKnown RBP5.12□□□□□ -1.59
UBR3-206ENST00000444475 CCDC61Q9Y6R9 512 aa5.12□□□□□ -1.59
UBR3-206ENST00000444475 ERBB3P21860 1342 aa5.12□□□□□ -1.59
UBR3-206ENST00000444475 CLCN1P35523 988 aa5.12□□□□□ -1.59
UBR3-206ENST00000444475 RNF187Q5TA31 235 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms