RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 NUTM2GQ5VZR2 741 aa23.72■■□□□ 1.39
TSPAN9-204ENST00000444315 PLCH1Q4KWH8 1693 aa23.72■■□□□ 1.39
TSPAN9-204ENST00000444315 CDK12Q9NYV4 1490 aaPredicted RBP23.71■■□□□ 1.39
TSPAN9-204ENST00000444315 POLR3AO14802 1390 aaPredicted RBP23.69■■□□□ 1.38
TSPAN9-204ENST00000444315 PLEKHG3A1L390 1219 aa23.69■■□□□ 1.38
TSPAN9-204ENST00000444315 UNC5CLQ8IV45 518 aa23.69■■□□□ 1.38
TSPAN9-204ENST00000444315 ABTB2Q8N961 1025 aa23.69■■□□□ 1.38
TSPAN9-204ENST00000444315 CCER1Q8TC90 406 aaPredicted RBP23.69■■□□□ 1.38
TSPAN9-204ENST00000444315 CABP1Q9NZU7 370 aa23.69■■□□□ 1.38
TSPAN9-204ENST00000444315 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.69■■□□□ 1.38
TSPAN9-204ENST00000444315 RGS12O14924 1447 aa23.68■■□□□ 1.38
TSPAN9-204ENST00000444315 ATRNO75882 1429 aa23.68■■□□□ 1.38
TSPAN9-204ENST00000444315 NWD2Q9ULI1 1742 aa23.67■■□□□ 1.38
TSPAN9-204ENST00000444315 A0A0G2JS52 829 aa23.66■■□□□ 1.38
TSPAN9-204ENST00000444315 MYT1Q01538 1121 aa23.66■■□□□ 1.38
TSPAN9-204ENST00000444315 PRDM11Q9NQV5 511 aa23.66■■□□□ 1.38
TSPAN9-204ENST00000444315 BCL9LQ86UU0 1499 aa23.66■■□□□ 1.38
TSPAN9-204ENST00000444315 COL14A1Q05707 1796 aaKnown RBP23.65■■□□□ 1.38
TSPAN9-204ENST00000444315 ATAD2Q6PL18 1390 aa23.65■■□□□ 1.38
TSPAN9-204ENST00000444315 SLIT2O94813 1529 aa23.64■■□□□ 1.38
TSPAN9-204ENST00000444315 PHRF1Q9P1Y6 1649 aaKnown RBP23.64■■□□□ 1.38
TSPAN9-204ENST00000444315 ZBTB7CA1YPR0 619 aa23.63■■□□□ 1.37
TSPAN9-204ENST00000444315 TMC1Q8TDI8 760 aa23.63■■□□□ 1.37
TSPAN9-204ENST00000444315 GJD4Q96KN9 370 aaPredicted RBP23.63■■□□□ 1.37
TSPAN9-204ENST00000444315 BTG4Q9NY30 223 aa23.62■■□□□ 1.37
TSPAN9-204ENST00000444315 CRYBG1Q9Y4K1 1723 aa23.62■■□□□ 1.37
TSPAN9-204ENST00000444315 FAM83GA6ND36 823 aa23.61■■□□□ 1.37
TSPAN9-204ENST00000444315 ZC3H6P61129 1189 aaKnown RBP23.61■■□□□ 1.37
TSPAN9-204ENST00000444315 CLSPNQ9HAW4 1339 aa23.6■■□□□ 1.37
TSPAN9-204ENST00000444315 NLRP13Q86W25 1043 aa23.6■■□□□ 1.37
TSPAN9-204ENST00000444315 USP6P35125 1406 aa23.59■■□□□ 1.37
TSPAN9-204ENST00000444315 BRD4O60885 1362 aaPredicted RBP23.58■■□□□ 1.37
TSPAN9-204ENST00000444315 KIAA0232Q92628 1395 aa23.58■■□□□ 1.37
TSPAN9-204ENST00000444315 SBNO2Q9Y2G9 1366 aa23.58■■□□□ 1.37
TSPAN9-204ENST00000444315 NLRP6P59044 892 aa23.57■■□□□ 1.36
TSPAN9-204ENST00000444315 CHRNA2Q15822 529 aa23.57■■□□□ 1.36
TSPAN9-204ENST00000444315 VPS72Q15906 364 aa23.57■■□□□ 1.36
TSPAN9-204ENST00000444315 AKAP12Q02952 1782 aa23.57■■□□□ 1.36
TSPAN9-204ENST00000444315 KTN1Q86UP2 1357 aaKnown RBP23.56■■□□□ 1.36
TSPAN9-204ENST00000444315 ZNF692Q9BU19 519 aaPredicted RBP23.56■■□□□ 1.36
TSPAN9-204ENST00000444315 STRN4Q9NRL3 753 aa23.56■■□□□ 1.36
TSPAN9-204ENST00000444315 ST20-MTHFSA0A0A6YYL1 179 aa23.55■■□□□ 1.36
TSPAN9-204ENST00000444315 HDGFL2Q7Z4V5 671 aaPredicted RBP23.55■■□□□ 1.36
TSPAN9-204ENST00000444315 NRAPQ86VF7 1730 aa23.55■■□□□ 1.36
TSPAN9-204ENST00000444315 GLI3P10071 1580 aa23.54■■□□□ 1.36
TSPAN9-204ENST00000444315 NRKQ7Z2Y5 1582 aa23.54■■□□□ 1.36
TSPAN9-204ENST00000444315 EVA1CP58658 441 aa23.54■■□□□ 1.36
TSPAN9-204ENST00000444315 USP47Q96K76 1375 aa23.53■■□□□ 1.36
TSPAN9-204ENST00000444315 SLC24A1O60721 1099 aa23.53■■□□□ 1.36
TSPAN9-204ENST00000444315 UPF1Q92900 1129 aaKnown RBP eCLIP23.53■■□□□ 1.36
TSPAN9-204ENST00000444315 TIMELESSQ9UNS1 1208 aa23.53■■□□□ 1.36
TSPAN9-204ENST00000444315 SOX12O15370 315 aa23.52■■□□□ 1.36
TSPAN9-204ENST00000444315 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.5■■□□□ 1.356e-9■■□□□ 11.9
TSPAN9-204ENST00000444315 TERF2IPQ9NYB0 399 aa23.5■■□□□ 1.35
TSPAN9-204ENST00000444315 TTC21BQ7Z4L5 1316 aa23.5■■□□□ 1.35
TSPAN9-204ENST00000444315 PIK3C2AO00443 1686 aa23.5■■□□□ 1.35
TSPAN9-204ENST00000444315 GCP02774 474 aa23.49■■□□□ 1.35
TSPAN9-204ENST00000444315 SEPT12Q8IYM1 358 aa23.49■■□□□ 1.35
TSPAN9-204ENST00000444315 MON2Q7Z3U7 1717 aa23.49■■□□□ 1.35
TSPAN9-204ENST00000444315 USP19O94966 1318 aa23.49■■□□□ 1.35
TSPAN9-204ENST00000444315 TMF1P82094 1093 aa23.48■■□□□ 1.35
TSPAN9-204ENST00000444315 FAM98CQ17RN3 349 aaKnown RBP23.48■■□□□ 1.35
TSPAN9-204ENST00000444315 TTC21AQ8NDW8 1320 aa23.48■■□□□ 1.35
TSPAN9-204ENST00000444315 USP35Q9P2H5 1018 aa23.47■■□□□ 1.35
TSPAN9-204ENST00000444315 BRWD3Q6RI45 1802 aa23.47■■□□□ 1.35
TSPAN9-204ENST00000444315 SLC12A5Q9H2X9 1139 aa23.45■■□□□ 1.34
TSPAN9-204ENST00000444315 CPSF1Q10570 1443 aaKnown RBP23.43■■□□□ 1.34
TSPAN9-204ENST00000444315 KCNH5Q8NCM2 988 aa23.43■■□□□ 1.34
TSPAN9-204ENST00000444315 CPDO75976 1380 aa23.42■■□□□ 1.34
TSPAN9-204ENST00000444315 SPATA31A5Q5VU36 1347 aa23.42■■□□□ 1.34
TSPAN9-204ENST00000444315 SPATA31A7Q8IWB4 1347 aa23.42■■□□□ 1.34
TSPAN9-204ENST00000444315 CDCA8Q53HL2 280 aa23.42■■□□□ 1.34
TSPAN9-204ENST00000444315 TESK2Q96S53 571 aa23.42■■□□□ 1.34
TSPAN9-204ENST00000444315 SLIT3O75094 1523 aa23.42■■□□□ 1.34
TSPAN9-204ENST00000444315 NINLQ9Y2I6 1382 aa23.41■■□□□ 1.34
TSPAN9-204ENST00000444315 SF3B2Q13435 895 aaKnown RBP23.41■■□□□ 1.34
TSPAN9-204ENST00000444315 KRT27Q7Z3Y8 459 aa23.41■■□□□ 1.34
TSPAN9-204ENST00000444315 SSH2Q76I76 1423 aa23.41■■□□□ 1.34
TSPAN9-204ENST00000444315 PUS7Q96PZ0 661 aaKnown RBP23.4■■□□□ 1.34
TSPAN9-204ENST00000444315 POLR3GLQ9BT43 218 aa23.4■■□□□ 1.34
TSPAN9-204ENST00000444315 A0A1W2PP64 1363 aa23.4■■□□□ 1.34
TSPAN9-204ENST00000444315 EDC4Q6P2E9 1401 aaKnown RBP23.39■■□□□ 1.33
TSPAN9-204ENST00000444315 SPATA31A1Q5TZJ5 1347 aa23.37■■□□□ 1.33
TSPAN9-204ENST00000444315 CSB-PGBD3P0DP91 1061 aa23.37■■□□□ 1.33
TSPAN9-204ENST00000444315 LARP1Q6PKG0 1096 aaKnown RBP23.37■■□□□ 1.33
TSPAN9-204ENST00000444315 NME9Q86XW9 330 aa23.37■■□□□ 1.33
TSPAN9-204ENST00000444315 LMO7Q8WWI1 1683 aa23.37■■□□□ 1.33
TSPAN9-204ENST00000444315 CAMTA1Q9Y6Y1 1673 aa23.37■■□□□ 1.33
TSPAN9-204ENST00000444315 CD163L1Q9NR16 1453 aa23.36■■□□□ 1.33
TSPAN9-204ENST00000444315 TOM1L2Q6ZVM7 507 aa23.34■■□□□ 1.33
TSPAN9-204ENST00000444315 ZRANB1Q9UGI0 708 aa23.34■■□□□ 1.33
TSPAN9-204ENST00000444315 COL5A2P05997 1499 aaPredicted RBP23.34■■□□□ 1.33
TSPAN9-204ENST00000444315 AATKQ6ZMQ8 1374 aa23.33■■□□□ 1.33
TSPAN9-204ENST00000444315 CCDC125Q86Z20 511 aa23.33■■□□□ 1.33
TSPAN9-204ENST00000444315 TCP11L2Q8N4U5 519 aa23.33■■□□□ 1.33
TSPAN9-204ENST00000444315 ONECUT3O60422 494 aaPredicted RBP23.32■■□□□ 1.32
TSPAN9-204ENST00000444315 RGPD5Q99666 1765 aa23.32■■□□□ 1.32
TSPAN9-204ENST00000444315 PDE3BQ13370 1112 aa23.31■■□□□ 1.32
TSPAN9-204ENST00000444315 LTN1O94822 1766 aa23.31■■□□□ 1.32
TSPAN9-204ENST00000444315 THSD7AQ9UPZ6 1657 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms