RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 BRWD3Q6RI45 1802 aa20.74■□□□□ 0.91
PTPRN-206ENST00000442029 GLI3P10071 1580 aa20.74■□□□□ 0.91
PTPRN-206ENST00000442029 RALGAPBQ86X10 1494 aa20.74■□□□□ 0.91
PTPRN-206ENST00000442029 SRPK2P78362 688 aaKnown RBP20.73■□□□□ 0.91
PTPRN-206ENST00000442029 CCDC9Q9Y3X0 531 aaKnown RBP20.73■□□□□ 0.91
PTPRN-206ENST00000442029 CCDC61Q9Y6R9 512 aa20.73■□□□□ 0.91
PTPRN-206ENST00000442029 NRAPQ86VF7 1730 aa20.73■□□□□ 0.91
PTPRN-206ENST00000442029 PHRF1Q9P1Y6 1649 aaKnown RBP20.71■□□□□ 0.91
PTPRN-206ENST00000442029 ACEP12821 1306 aa20.7■□□□□ 0.9
PTPRN-206ENST00000442029 ROCK2O75116 1388 aaKnown RBP20.7■□□□□ 0.9
PTPRN-206ENST00000442029 FAM83GA6ND36 823 aa20.69■□□□□ 0.9
PTPRN-206ENST00000442029 VPS72Q15906 364 aa20.69■□□□□ 0.9
PTPRN-206ENST00000442029 POLR3AO14802 1390 aaPredicted RBP20.69■□□□□ 0.9
PTPRN-206ENST00000442029 PPIP5K1Q6PFW1 1433 aa20.68■□□□□ 0.9
PTPRN-206ENST00000442029 PLEKHG3A1L390 1219 aa20.67■□□□□ 0.9
PTPRN-206ENST00000442029 NBPF8Q3BBV2 869 aa20.67■□□□□ 0.9
PTPRN-206ENST00000442029 CABP2Q9NPB3 220 aa20.66■□□□□ 0.9
PTPRN-206ENST00000442029 BTG4Q9NY30 223 aa20.66■□□□□ 0.9
PTPRN-206ENST00000442029 PRDM11Q9NQV5 511 aa20.65■□□□□ 0.9
PTPRN-206ENST00000442029 EVC2Q86UK5 1308 aa20.64■□□□□ 0.89
PTPRN-206ENST00000442029 TRIM26Q12899 539 aaPredicted RBP20.64■□□□□ 0.89
PTPRN-206ENST00000442029 NUTM2GQ5VZR2 741 aa20.64■□□□□ 0.89
PTPRN-206ENST00000442029 TONSLQ96HA7 1378 aa20.63■□□□□ 0.89
PTPRN-206ENST00000442029 A0A0G2JS52 829 aa20.63■□□□□ 0.89
PTPRN-206ENST00000442029 MYT1Q01538 1121 aa20.63■□□□□ 0.89
PTPRN-206ENST00000442029 SEPT12Q8IYM1 358 aa20.62■□□□□ 0.89
PTPRN-206ENST00000442029 ABTB2Q8N961 1025 aa20.62■□□□□ 0.89
PTPRN-206ENST00000442029 KIAA0232Q92628 1395 aa20.6■□□□□ 0.89
PTPRN-206ENST00000442029 NRKQ7Z2Y5 1582 aa20.6■□□□□ 0.89
PTPRN-206ENST00000442029 CCDC125Q86Z20 511 aa20.6■□□□□ 0.89
PTPRN-206ENST00000442029 AKAP12Q02952 1782 aa20.59■□□□□ 0.89
PTPRN-206ENST00000442029 BRD4O60885 1362 aaPredicted RBP20.59■□□□□ 0.89
PTPRN-206ENST00000442029 ZC3H6P61129 1189 aaKnown RBP20.58■□□□□ 0.89
PTPRN-206ENST00000442029 CABP1Q9NZU7 370 aa20.58■□□□□ 0.89
PTPRN-206ENST00000442029 EP400Q96L91 3159 aa20.57■□□□□ 0.88
PTPRN-206ENST00000442029 FAM98CQ17RN3 349 aaKnown RBP20.57■□□□□ 0.88
PTPRN-206ENST00000442029 NLRP13Q86W25 1043 aa20.57■□□□□ 0.88
PTPRN-206ENST00000442029 ONECUT3O60422 494 aaPredicted RBP20.56■□□□□ 0.88
PTPRN-206ENST00000442029 CHRNA2Q15822 529 aa20.56■□□□□ 0.88
PTPRN-206ENST00000442029 KRT27Q7Z3Y8 459 aa20.56■□□□□ 0.88
PTPRN-206ENST00000442029 CARD11Q9BXL7 1154 aa20.56■□□□□ 0.88
PTPRN-206ENST00000442029 USP6P35125 1406 aa20.55■□□□□ 0.88
PTPRN-206ENST00000442029 STRN4Q9NRL3 753 aa20.55■□□□□ 0.88
PTPRN-206ENST00000442029 SF3B2Q13435 895 aaKnown RBP20.54■□□□□ 0.88
PTPRN-206ENST00000442029 SPATA31A5Q5VU36 1347 aa20.53■□□□□ 0.88
PTPRN-206ENST00000442029 SPATA31A7Q8IWB4 1347 aa20.53■□□□□ 0.88
PTPRN-206ENST00000442029 BLMP54132 1417 aaPredicted RBP20.53■□□□□ 0.88
PTPRN-206ENST00000442029 EVA1CP58658 441 aa20.53■□□□□ 0.88
PTPRN-206ENST00000442029 USP19O94966 1318 aa20.53■□□□□ 0.88
PTPRN-206ENST00000442029 PIK3C2AO00443 1686 aa20.52■□□□□ 0.88
PTPRN-206ENST00000442029 THSD7AQ9UPZ6 1657 aa20.51■□□□□ 0.87
PTPRN-206ENST00000442029 NLRP6P59044 892 aa20.51■□□□□ 0.87
PTPRN-206ENST00000442029 LMO7Q8WWI1 1683 aa20.51■□□□□ 0.87
PTPRN-206ENST00000442029 CPDO75976 1380 aa20.5■□□□□ 0.87
PTPRN-206ENST00000442029 ZNF692Q9BU19 519 aaPredicted RBP20.5■□□□□ 0.87
PTPRN-206ENST00000442029 RGPD1P0DJD0 1748 aa20.5■□□□□ 0.87
PTPRN-206ENST00000442029 MON2Q7Z3U7 1717 aa20.5■□□□□ 0.87
PTPRN-206ENST00000442029 SBNO2Q9Y2G9 1366 aa20.49■□□□□ 0.87
PTPRN-206ENST00000442029 ZBTB7CA1YPR0 619 aa20.49■□□□□ 0.87
PTPRN-206ENST00000442029 GCP02774 474 aa20.49■□□□□ 0.87
PTPRN-206ENST00000442029 SPATA31A1Q5TZJ5 1347 aa20.49■□□□□ 0.87
PTPRN-206ENST00000442029 SSH2Q76I76 1423 aa20.48■□□□□ 0.87
PTPRN-206ENST00000442029 CAMTA1Q9Y6Y1 1673 aa20.48■□□□□ 0.87
PTPRN-206ENST00000442029 USP35Q9P2H5 1018 aa20.47■□□□□ 0.87
PTPRN-206ENST00000442029 ZRANB1Q9UGI0 708 aa20.47■□□□□ 0.87
PTPRN-206ENST00000442029 SLIT3O75094 1523 aa20.47■□□□□ 0.87
PTPRN-206ENST00000442029 RGPD5Q99666 1765 aa20.45■□□□□ 0.86
PTPRN-206ENST00000442029 KTN1Q86UP2 1357 aaKnown RBP20.45■□□□□ 0.86
PTPRN-206ENST00000442029 TTC21BQ7Z4L5 1316 aa20.44■□□□□ 0.86
PTPRN-206ENST00000442029 TTC21AQ8NDW8 1320 aa20.44■□□□□ 0.86
PTPRN-206ENST00000442029 LARP1Q6PKG0 1096 aaKnown RBP20.42■□□□□ 0.86
PTPRN-206ENST00000442029 DEFB132Q7Z7B7 95 aa20.42■□□□□ 0.86
PTPRN-206ENST00000442029 TMC1Q8TDI8 760 aa20.42■□□□□ 0.86
PTPRN-206ENST00000442029 CPSF1Q10570 1443 aaKnown RBP20.42■□□□□ 0.86
PTPRN-206ENST00000442029 COL5A2P05997 1499 aaPredicted RBP20.42■□□□□ 0.86
PTPRN-206ENST00000442029 COL18A1P39060 1754 aa20.41■□□□□ 0.86
PTPRN-206ENST00000442029 BAG6P46379 1132 aa20.41■□□□□ 0.86
PTPRN-206ENST00000442029 KCNH5Q8NCM2 988 aa20.41■□□□□ 0.86
PTPRN-206ENST00000442029 FAM182BQ5T319 152 aa20.4■□□□□ 0.86
PTPRN-206ENST00000442029 AATKQ6ZMQ8 1374 aa20.4■□□□□ 0.86
PTPRN-206ENST00000442029 BARGINQ6ZT62 677 aa20.4■□□□□ 0.86
PTPRN-206ENST00000442029 TCP11L2Q8N4U5 519 aa20.4■□□□□ 0.86
PTPRN-206ENST00000442029 WNK3Q9BYP7 1800 aa20.39■□□□□ 0.86
PTPRN-206ENST00000442029 TNS1Q9HBL0 1735 aaKnown RBP20.39■□□□□ 0.86
PTPRN-206ENST00000442029 PARP4Q9UKK3 1724 aaKnown RBP20.39■□□□□ 0.86
PTPRN-206ENST00000442029 SOX12O15370 315 aa20.39■□□□□ 0.85
PTPRN-206ENST00000442029 HDGFL2Q7Z4V5 671 aaPredicted RBP20.39■□□□□ 0.85
PTPRN-206ENST00000442029 THRAP3Q9Y2W1 955 aaKnown RBP20.39■□□□□ 0.85
PTPRN-206ENST00000442029 CRB1P82279 1406 aa20.38■□□□□ 0.85
PTPRN-206ENST00000442029 PDE3BQ13370 1112 aa20.38■□□□□ 0.85
PTPRN-206ENST00000442029 LTN1O94822 1766 aa20.38■□□□□ 0.85
PTPRN-206ENST00000442029 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.37■□□□□ 0.85
PTPRN-206ENST00000442029 USP54Q70EL1 1684 aa20.37■□□□□ 0.85
PTPRN-206ENST00000442029 SLC24A1O60721 1099 aa20.36■□□□□ 0.85
PTPRN-206ENST00000442029 FAM196AQ6ZSG2 479 aa20.36■□□□□ 0.85
PTPRN-206ENST00000442029 TOM1L2Q6ZVM7 507 aa20.35■□□□□ 0.85
PTPRN-206ENST00000442029 TERF2IPQ9NYB0 399 aa20.35■□□□□ 0.85
PTPRN-206ENST00000442029 ST20-MTHFSA0A0A6YYL1 179 aa20.34■□□□□ 0.85
PTPRN-206ENST00000442029 CD163L1Q9NR16 1453 aa20.34■□□□□ 0.85
PTPRN-206ENST00000442029 NFAT5O94916 1531 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms