RNA–Protein interactions for RNA: ENST00000441719.5

KDM3A-205, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 8,741 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-205ENST00000441719 BRMS1Q9HCU9 246 aa12.95□□□□□ -0.34
KDM3A-205ENST00000441719 GNAI3P08754 354 aa12.95□□□□□ -0.34
KDM3A-205ENST00000441719 RRS1Q15050 365 aaKnown RBP12.95□□□□□ -0.34
KDM3A-205ENST00000441719 ATP2B1P20020 1258 aa12.95□□□□□ -0.34
KDM3A-205ENST00000441719 NAP1L1P55209 391 aaKnown RBP12.95□□□□□ -0.34
KDM3A-205ENST00000441719 ATP2B2Q01814 1243 aa12.95□□□□□ -0.34
KDM3A-205ENST00000441719 GSE1Q14687 1217 aa12.95□□□□□ -0.34
KDM3A-205ENST00000441719 MRC2Q9UBG0 1479 aa12.95□□□□□ -0.34
KDM3A-205ENST00000441719 IPO7O95373 1038 aaKnown RBP12.94□□□□□ -0.34
KDM3A-205ENST00000441719 TNNT3P45378 269 aaPredicted RBP12.94□□□□□ -0.34
KDM3A-205ENST00000441719 ZNF530Q6P9A1 599 aaPredicted RBP12.94□□□□□ -0.34
KDM3A-205ENST00000441719 HDGFL1Q5TGJ6 251 aa12.94□□□□□ -0.34
KDM3A-205ENST00000441719 CCDC70Q6NSX1 233 aa12.94□□□□□ -0.34
KDM3A-205ENST00000441719 CCDC73Q6ZRK6 1079 aa12.94□□□□□ -0.34
KDM3A-205ENST00000441719 ANKLE2Q86XL3 938 aa12.94□□□□□ -0.34
KDM3A-205ENST00000441719 HOMER1Q86YM7 354 aa12.94□□□□□ -0.34
KDM3A-205ENST00000441719 C9orf84Q5VXU9 1444 aa12.94□□□□□ -0.34
KDM3A-205ENST00000441719 NCAPD3P42695 1498 aa12.94□□□□□ -0.34
KDM3A-205ENST00000441719 SPG7Q9UQ90 795 aa12.94□□□□□ -0.34
KDM3A-205ENST00000441719 PSMA5P28066 241 aa12.93□□□□□ -0.34
KDM3A-205ENST00000441719 RTEL1-TNFRSF6BF6WH68 1400 aa12.93□□□□□ -0.34
KDM3A-205ENST00000441719 SNAPC4Q5SXM2 1469 aa12.93□□□□□ -0.34
KDM3A-205ENST00000441719 BRD4O60885 1362 aaPredicted RBP12.93□□□□□ -0.34
KDM3A-205ENST00000441719 GNAI2P04899 355 aa12.93□□□□□ -0.34
KDM3A-205ENST00000441719 CCDC158Q5M9N0 1113 aa12.93□□□□□ -0.34
KDM3A-205ENST00000441719 KRI1Q8N9T8 703 aaKnown RBP12.93□□□□□ -0.34
KDM3A-205ENST00000441719 XBP1P17861 261 aa12.93□□□□□ -0.34
KDM3A-205ENST00000441719 BICDL1Q6ZP65 573 aa12.92□□□□□ -0.34
KDM3A-205ENST00000441719 BCAR3O75815 825 aa12.92□□□□□ -0.34
KDM3A-205ENST00000441719 NUCB2P80303 420 aa12.92□□□□□ -0.34
KDM3A-205ENST00000441719 ERBINQ96RT1 1412 aa12.92□□□□□ -0.34
KDM3A-205ENST00000441719 ZNF692Q9BU19 519 aaPredicted RBP12.92□□□□□ -0.34
KDM3A-205ENST00000441719 ZC3H6P61129 1189 aaKnown RBP12.92□□□□□ -0.34
KDM3A-205ENST00000441719 PDZRN3Q9UPQ7 1066 aa12.92□□□□□ -0.34
KDM3A-205ENST00000441719 TMEM132AQ24JP5 1023 aa12.91□□□□□ -0.34
KDM3A-205ENST00000441719 SART3Q15020 963 aaKnown RBP12.91□□□□□ -0.34
KDM3A-205ENST00000441719 RBM5P52756 815 aaKnown RBP eCLIP12.91□□□□□ -0.34
KDM3A-205ENST00000441719 EPS15P42566 896 aa12.91□□□□□ -0.34
KDM3A-205ENST00000441719 CCAR1Q8IX12 1150 aaKnown RBP12.91□□□□□ -0.34
KDM3A-205ENST00000441719 PATL2C9JE40 543 aaKnown RBP12.9□□□□□ -0.34
KDM3A-205ENST00000441719 PDILTQ8N807 584 aa12.9□□□□□ -0.34
KDM3A-205ENST00000441719 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.9□□□□□ -0.34
KDM3A-205ENST00000441719 SPINK5Q9NQ38 1064 aaPredicted RBP12.9□□□□□ -0.34
KDM3A-205ENST00000441719 OLFM4Q6UX06 510 aa12.9□□□□□ -0.34
KDM3A-205ENST00000441719 NBPF8Q3BBV2 869 aa12.9□□□□□ -0.34
KDM3A-205ENST00000441719 BTBD11A6QL63 1104 aa12.9□□□□□ -0.34
KDM3A-205ENST00000441719 SLC3A2P08195 630 aaKnown RBP12.9□□□□□ -0.34
KDM3A-205ENST00000441719 STK3Q13188 491 aa12.9□□□□□ -0.34
KDM3A-205ENST00000441719 CT47A1Q5JQC4 288 aaPredicted RBP12.89□□□□□ -0.35
KDM3A-205ENST00000441719 PRDM11Q9NQV5 511 aa12.89□□□□□ -0.35
KDM3A-205ENST00000441719 R3HCC1Q9Y3T6 440 aaKnown RBP12.89□□□□□ -0.35
KDM3A-205ENST00000441719 CEBPZQ03701 1054 aaKnown RBP12.89□□□□□ -0.35
KDM3A-205ENST00000441719 IFT140Q96RY7 1462 aa12.89□□□□□ -0.35
KDM3A-205ENST00000441719 ARAP1Q96P48 1450 aa12.89□□□□□ -0.35
KDM3A-205ENST00000441719 ERC1Q8IUD2 1116 aa12.89□□□□□ -0.35
KDM3A-205ENST00000441719 GNL3LQ9NVN8 582 aaKnown RBP12.89□□□□□ -0.35
KDM3A-205ENST00000441719 CCDC85AQ96PX6 553 aaPredicted RBP12.88□□□□□ -0.35
KDM3A-205ENST00000441719 ZFYVE27Q5T4F4 411 aa12.88□□□□□ -0.35
KDM3A-205ENST00000441719 KIAA1107Q9UPP5 1409 aa12.88□□□□□ -0.35
KDM3A-205ENST00000441719 NEK4P51957 841 aa12.88□□□□□ -0.35
KDM3A-205ENST00000441719 ODF2Q5BJF6 829 aa12.87□□□□□ -0.35
KDM3A-205ENST00000441719 SDF4Q9BRK5 362 aa12.87□□□□□ -0.35
KDM3A-205ENST00000441719 TTLL5Q6EMB2 1281 aa12.87□□□□□ -0.35
KDM3A-205ENST00000441719 SYNJ1O43426 1573 aa12.87□□□□□ -0.35
KDM3A-205ENST00000441719 CDK5RAP3Q96JB5 506 aa12.87□□□□□ -0.35
KDM3A-205ENST00000441719 MPHOSPH8Q99549 860 aa12.87□□□□□ -0.35
KDM3A-205ENST00000441719 FKBP4Q02790 459 aaKnown RBP eCLIP12.87□□□□□ -0.35
KDM3A-205ENST00000441719 PNISRQ8TF01 805 aaKnown RBP12.87□□□□□ -0.35
KDM3A-205ENST00000441719 CCDC57Q2TAC2 916 aa12.87□□□□□ -0.35
KDM3A-205ENST00000441719 MIS18AQ9NYP9 233 aa12.87□□□□□ -0.35
KDM3A-205ENST00000441719 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.86□□□□□ -0.355e-7■■■■■ 51.1
KDM3A-205ENST00000441719 CC2D2AQ9P2K1 1620 aa12.86□□□□□ -0.35
KDM3A-205ENST00000441719 HIP1O00291 1037 aa12.86□□□□□ -0.35
KDM3A-205ENST00000441719 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.86□□□□□ -0.351e-6■■■□□ 14.8
KDM3A-205ENST00000441719 SLC52A1Q9NWF4 448 aa12.86□□□□□ -0.35
KDM3A-205ENST00000441719 WAPLQ7Z5K2 1190 aa12.86□□□□□ -0.35
KDM3A-205ENST00000441719 SRCIN1Q9C0H9 1055 aa12.86□□□□□ -0.35
KDM3A-205ENST00000441719 EHBP1L1Q8N3D4 1523 aa12.86□□□□□ -0.35
KDM3A-205ENST00000441719 IFT57Q9NWB7 429 aa12.86□□□□□ -0.35
KDM3A-205ENST00000441719 HFM1A2PYH4 1435 aa12.85□□□□□ -0.35
KDM3A-205ENST00000441719 LRRCC1Q9C099 1032 aa12.85□□□□□ -0.35
KDM3A-205ENST00000441719 CCT4P50991 539 aaKnown RBP12.85□□□□□ -0.35
KDM3A-205ENST00000441719 RNF214Q8ND24 703 aa12.85□□□□□ -0.35
KDM3A-205ENST00000441719 PLEKHH2Q8IVE3 1493 aa12.85□□□□□ -0.35
KDM3A-205ENST00000441719 GPS2Q13227 327 aa12.85□□□□□ -0.35
KDM3A-205ENST00000441719 NUDT16Q96DE0 195 aaKnown RBP12.85□□□□□ -0.35
KDM3A-205ENST00000441719 NUP133Q8WUM0 1156 aa12.84□□□□□ -0.35
KDM3A-205ENST00000441719 OFD1O75665 1012 aa12.84□□□□□ -0.35
KDM3A-205ENST00000441719 GCC1Q96CN9 775 aa12.84□□□□□ -0.35
KDM3A-205ENST00000441719 AAMPQ13685 434 aa12.84□□□□□ -0.35
KDM3A-205ENST00000441719 KRT18P05783 430 aaKnown RBP12.84□□□□□ -0.35
KDM3A-205ENST00000441719 BRPF1P55201 1214 aaPredicted RBP12.84□□□□□ -0.35
KDM3A-205ENST00000441719 AACSQ86V21 672 aa12.84□□□□□ -0.35
KDM3A-205ENST00000441719 ZSCAN29Q8IWY8 852 aaPredicted RBP12.83□□□□□ -0.35
KDM3A-205ENST00000441719 USHBP1Q8N6Y0 703 aa12.83□□□□□ -0.35
KDM3A-205ENST00000441719 ERICH3Q5RHP9 1530 aa12.83□□□□□ -0.36
KDM3A-205ENST00000441719 CCDC69A6NI79 296 aa12.83□□□□□ -0.36
KDM3A-205ENST00000441719 TOPBP1Q92547 1522 aa12.83□□□□□ -0.36
KDM3A-205ENST00000441719 FMNL2Q96PY5 1086 aa12.83□□□□□ -0.36
KDM3A-205ENST00000441719 TROQ12816 1431 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms