RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 PLEKHG1Q9ULL1 1385 aa10.89□□□□□ -0.67
COPS3-203ENST00000439936 SPATA31E1Q6ZUB1 1445 aa10.89□□□□□ -0.67
COPS3-203ENST00000439936 DHX57Q6P158 1386 aaKnown RBP10.88□□□□□ -0.67
COPS3-203ENST00000439936 TMEM92Q6UXU6 159 aa10.88□□□□□ -0.67
COPS3-203ENST00000439936 FBXO22Q8NEZ5 403 aa10.88□□□□□ -0.67
COPS3-203ENST00000439936 CERKQ8TCT0 537 aa10.88□□□□□ -0.67
COPS3-203ENST00000439936 ZSWIM6Q9HCJ5 1215 aa10.88□□□□□ -0.67
COPS3-203ENST00000439936 STK25O00506 426 aa10.87□□□□□ -0.67
COPS3-203ENST00000439936 MICALL2Q8IY33 904 aa10.87□□□□□ -0.67
COPS3-203ENST00000439936 SIN3AQ96ST3 1273 aa10.87□□□□□ -0.67
COPS3-203ENST00000439936 NEXMIFQ5QGS0 1516 aa10.86□□□□□ -0.67
COPS3-203ENST00000439936 ADGRF5Q8IZF2 1346 aa10.86□□□□□ -0.67
COPS3-203ENST00000439936 LTBP4Q8N2S1 1624 aa10.86□□□□□ -0.67
COPS3-203ENST00000439936 PPLO60437 1756 aa10.85□□□□□ -0.67
COPS3-203ENST00000439936 KCNA6P17658 529 aa10.85□□□□□ -0.67
COPS3-203ENST00000439936 MFRPQ9BY79 579 aa10.85□□□□□ -0.67
COPS3-203ENST00000439936 KDM2AQ9Y2K7 1162 aa10.85□□□□□ -0.67
COPS3-203ENST00000439936 ADAMTS13Q76LX8 1427 aa10.84□□□□□ -0.67
COPS3-203ENST00000439936 STRCP1A6NGW2 1772 aa10.84□□□□□ -0.67
COPS3-203ENST00000439936 NEUROD1Q13562 356 aa10.84□□□□□ -0.67
COPS3-203ENST00000439936 DCAF11Q8TEB1 546 aa10.84□□□□□ -0.67
COPS3-203ENST00000439936 CHD2O14647 1828 aaKnown RBP10.83□□□□□ -0.68
COPS3-203ENST00000439936 PROSER2Q86WR7 435 aaPredicted RBP10.82□□□□□ -0.68
COPS3-203ENST00000439936 IFT172Q9UG01 1749 aa10.82□□□□□ -0.68
COPS3-203ENST00000439936 PLCB2Q00722 1185 aa10.81□□□□□ -0.68
COPS3-203ENST00000439936 NKX1-1Q15270 411 aaPredicted RBP10.81□□□□□ -0.68
COPS3-203ENST00000439936 STAC3Q96MF2 364 aa10.81□□□□□ -0.68
COPS3-203ENST00000439936 AMOTL2Q9Y2J4 779 aa10.81□□□□□ -0.68
COPS3-203ENST00000439936 METP08581 1390 aa10.81□□□□□ -0.68
COPS3-203ENST00000439936 NRXN3Q9Y4C0 1643 aa10.8□□□□□ -0.68
COPS3-203ENST00000439936 RNF166Q96A37 237 aaPredicted RBP10.8□□□□□ -0.68
COPS3-203ENST00000439936 RBM33Q96EV2 1170 aaKnown RBP10.8□□□□□ -0.68
COPS3-203ENST00000439936 SETBP1Q9Y6X0 1596 aa10.8□□□□□ -0.68
COPS3-203ENST00000439936 PTPRUQ92729 1446 aa10.79□□□□□ -0.68
COPS3-203ENST00000439936 PTGER2P43116 358 aa10.79□□□□□ -0.68
COPS3-203ENST00000439936 NLRP6P59044 892 aa10.79□□□□□ -0.68
COPS3-203ENST00000439936 CFAP70Q5T0N1 1121 aa10.79□□□□□ -0.68
COPS3-203ENST00000439936 L3MBTL2Q969R5 705 aa10.79□□□□□ -0.68
COPS3-203ENST00000439936 C14orf93Q9H972 538 aaKnown RBP10.79□□□□□ -0.68
COPS3-203ENST00000439936 PIK3R4Q99570 1358 aa10.79□□□□□ -0.68
COPS3-203ENST00000439936 ALKQ9UM73 1620 aa10.79□□□□□ -0.68
COPS3-203ENST00000439936 TMEM132EQ6IEE7 984 aa10.78□□□□□ -0.68
COPS3-203ENST00000439936 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.78□□□□□ -0.68
COPS3-203ENST00000439936 CPS1P31327 1500 aa10.78□□□□□ -0.68
COPS3-203ENST00000439936 DIP2AQ14689 1571 aa10.78□□□□□ -0.68
COPS3-203ENST00000439936 LRRC7Q96NW7 1537 aa10.78□□□□□ -0.68
COPS3-203ENST00000439936 VARS2Q5ST30 1063 aaKnown RBP10.77□□□□□ -0.68
COPS3-203ENST00000439936 ZNF687Q8N1G0 1237 aa10.77□□□□□ -0.68
COPS3-203ENST00000439936 FBXO41Q8TF61 875 aa10.77□□□□□ -0.69
COPS3-203ENST00000439936 XIRP1Q702N8 1843 aaKnown RBP10.76□□□□□ -0.69
COPS3-203ENST00000439936 MYOM2P54296 1465 aa10.76□□□□□ -0.69
COPS3-203ENST00000439936 NRXN1Q9ULB1 1477 aa10.76□□□□□ -0.69
COPS3-203ENST00000439936 STK26Q9P289 416 aa10.76□□□□□ -0.69
COPS3-203ENST00000439936 SETD1AO15047 1707 aaKnown RBP10.75□□□□□ -0.69
COPS3-203ENST00000439936 PIK3C2GO75747 1445 aa10.75□□□□□ -0.69
COPS3-203ENST00000439936 TMEM94Q12767 1356 aa10.75□□□□□ -0.69
COPS3-203ENST00000439936 UBAP1LF5GYI3 381 aa10.75□□□□□ -0.69
COPS3-203ENST00000439936 NWD1Q149M9 1564 aa10.74□□□□□ -0.69
COPS3-203ENST00000439936 IQSEC2Q5JU85 1478 aa10.74□□□□□ -0.69
COPS3-203ENST00000439936 PAXIP1Q6ZW49 1069 aaPredicted RBP10.74□□□□□ -0.69
COPS3-203ENST00000439936 CCER1Q8TC90 406 aaPredicted RBP10.74□□□□□ -0.69
COPS3-203ENST00000439936 TOM1O60784 492 aa10.73□□□□□ -0.69
COPS3-203ENST00000439936 SPRYD3Q8NCJ5 442 aa10.73□□□□□ -0.69
COPS3-203ENST00000439936 NKTRP30414 1462 aaKnown RBP10.72□□□□□ -0.69
COPS3-203ENST00000439936 NBPF1Q3BBV0 1214 aa10.72□□□□□ -0.69
COPS3-203ENST00000439936 WAPLQ7Z5K2 1190 aa10.72□□□□□ -0.69
COPS3-203ENST00000439936 CFAP44Q96MT7 982 aa10.72□□□□□ -0.69
COPS3-203ENST00000439936 CLSPNQ9HAW4 1339 aa10.72□□□□□ -0.69
COPS3-203ENST00000439936 LRPPRCP42704 1394 aaKnown RBP10.71□□□□□ -0.69
COPS3-203ENST00000439936 ABCC11Q96J66 1382 aa10.71□□□□□ -0.69
COPS3-203ENST00000439936 XRN1Q8IZH2 1706 aaKnown RBP10.71□□□□□ -0.69
COPS3-203ENST00000439936 NCOA3Q9Y6Q9 1424 aa10.71□□□□□ -0.69
COPS3-203ENST00000439936 GTPBP6O43824 516 aaPredicted RBP10.71□□□□□ -0.69
COPS3-203ENST00000439936 PPP1R37O75864 691 aa10.71□□□□□ -0.69
COPS3-203ENST00000439936 NBPF8Q3BBV2 869 aa10.71□□□□□ -0.69
COPS3-203ENST00000439936 GPR153Q6NV75 609 aa10.71□□□□□ -0.69
COPS3-203ENST00000439936 C14orf37Q86TY3 774 aa10.71□□□□□ -0.69
COPS3-203ENST00000439936 SIRT1Q96EB6 747 aa10.71□□□□□ -0.69
COPS3-203ENST00000439936 C19orf44Q9H6X5 657 aa10.71□□□□□ -0.69
COPS3-203ENST00000439936 ROBO2Q9HCK4 1378 aa10.7□□□□□ -0.7
COPS3-203ENST00000439936 YTHDC2Q9H6S0 1430 aaKnown RBP10.7□□□□□ -0.7
COPS3-203ENST00000439936 TRAK1Q9UPV9 953 aa10.7□□□□□ -0.7
COPS3-203ENST00000439936 TONSLQ96HA7 1378 aa10.7□□□□□ -0.7
COPS3-203ENST00000439936 PRAG1Q86YV5 1406 aa10.69□□□□□ -0.7
COPS3-203ENST00000439936 PIP4K2BP78356 416 aa10.69□□□□□ -0.7
COPS3-203ENST00000439936 ASXL1Q8IXJ9 1541 aa10.69□□□□□ -0.7
COPS3-203ENST00000439936 MSH6P52701 1360 aa10.69□□□□□ -0.7
COPS3-203ENST00000439936 SLAIN2Q9P270 581 aa10.68□□□□□ -0.7
COPS3-203ENST00000439936 LAMC1P11047 1609 aa10.68□□□□□ -0.7
COPS3-203ENST00000439936 ATF3P18847 181 aa10.67□□□□□ -0.7
COPS3-203ENST00000439936 TIMELESSQ9UNS1 1208 aa10.67□□□□□ -0.7
COPS3-203ENST00000439936 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.67□□□□□ -0.7
COPS3-203ENST00000439936 ADGRB1O14514 1584 aa10.67□□□□□ -0.7
COPS3-203ENST00000439936 KIAA1210Q9ULL0 1709 aa10.66□□□□□ -0.7
COPS3-203ENST00000439936 CADPS2Q86UW7 1296 aa10.66□□□□□ -0.7
COPS3-203ENST00000439936 PRAM1Q96QH2 718 aa10.66□□□□□ -0.7
COPS3-203ENST00000439936 POGKQ9P215 609 aa10.66□□□□□ -0.7
COPS3-203ENST00000439936 PLEKHH1Q9ULM0 1364 aa10.66□□□□□ -0.7
COPS3-203ENST00000439936 TECPR2O15040 1411 aa10.66□□□□□ -0.7
COPS3-203ENST00000439936 KIF3CO14782 793 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms