RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMGB1P37-201ENST00000439613 DDX12PQ92771 950 aa5.56□□□□□ -1.52
HMGB1P37-201ENST00000439613 RALGAPBQ86X10 1494 aa5.56□□□□□ -1.52
HMGB1P37-201ENST00000439613 COL17A1Q9UMD9 1497 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P37-201ENST00000439613 CLTCL1P53675 1640 aa5.56□□□□□ -1.52
HMGB1P37-201ENST00000439613 RPGRIP1LQ68CZ1 1315 aa5.55□□□□□ -1.52
HMGB1P37-201ENST00000439613 TULP1O00294 542 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P37-201ENST00000439613 RGL3Q3MIN7 710 aa5.55□□□□□ -1.52
HMGB1P37-201ENST00000439613 ZNF326Q5BKZ1 582 aaKnown RBP5.55□□□□□ -1.52
HMGB1P37-201ENST00000439613 RBM26Q5T8P6 1007 aaKnown RBP5.55□□□□□ -1.52
HMGB1P37-201ENST00000439613 ESF1Q9H501 851 aaKnown RBP5.55□□□□□ -1.52
HMGB1P37-201ENST00000439613 SLC52A1Q9NWF4 448 aa5.55□□□□□ -1.52
HMGB1P37-201ENST00000439613 LHX6Q9UPM6 363 aa5.55□□□□□ -1.52
HMGB1P37-201ENST00000439613 NPATQ14207 1427 aa5.55□□□□□ -1.52
HMGB1P37-201ENST00000439613 PHF14O94880 888 aa5.54□□□□□ -1.52
HMGB1P37-201ENST00000439613 HSPA5P11021 654 aaKnown RBP5.54□□□□□ -1.52
HMGB1P37-201ENST00000439613 LAMC1P11047 1609 aa5.54□□□□□ -1.52
HMGB1P37-201ENST00000439613 NOS1P29475 1434 aa5.54□□□□□ -1.52
HMGB1P37-201ENST00000439613 PRAG1Q86YV5 1406 aa5.54□□□□□ -1.52
HMGB1P37-201ENST00000439613 POLR1AO95602 1720 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P37-201ENST00000439613 KIAA1210Q9ULL0 1709 aa5.54□□□□□ -1.52
HMGB1P37-201ENST00000439613 ARID4BQ4LE39 1312 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P37-201ENST00000439613 PIK3C2BO00750 1634 aa5.53□□□□□ -1.52
HMGB1P37-201ENST00000439613 TRPM1Q7Z4N2 1603 aa5.53□□□□□ -1.52
HMGB1P37-201ENST00000439613 PSDA5PKW4 1024 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P37-201ENST00000439613 EPAS1Q99814 870 aa5.53□□□□□ -1.52
HMGB1P37-201ENST00000439613 CARD11Q9BXL7 1154 aa5.53□□□□□ -1.52
HMGB1P37-201ENST00000439613 ROCK2O75116 1388 aaKnown RBP5.53□□□□□ -1.52
HMGB1P37-201ENST00000439613 USP47Q96K76 1375 aa5.53□□□□□ -1.52
HMGB1P37-201ENST00000439613 CLTCQ00610 1675 aaKnown RBP5.53□□□□□ -1.52
HMGB1P37-201ENST00000439613 PREX1Q8TCU6 1659 aa5.53□□□□□ -1.52
HMGB1P37-201ENST00000439613 MYOM2P54296 1465 aa5.52□□□□□ -1.53
HMGB1P37-201ENST00000439613 SIGLEC1Q9BZZ2 1709 aa5.52□□□□□ -1.53
HMGB1P37-201ENST00000439613 IFT172Q9UG01 1749 aa5.52□□□□□ -1.53
HMGB1P37-201ENST00000439613 OSBPP22059 807 aa5.52□□□□□ -1.53
HMGB1P37-201ENST00000439613 PRIM1P49642 420 aaKnown RBP5.52□□□□□ -1.53
HMGB1P37-201ENST00000439613 FOSBP53539 338 aa5.52□□□□□ -1.53
HMGB1P37-201ENST00000439613 EMP3P54852 163 aa5.52□□□□□ -1.53
HMGB1P37-201ENST00000439613 ZNF454Q8N9F8 522 aa5.52□□□□□ -1.53
HMGB1P37-201ENST00000439613 MARVELD3Q96A59 401 aa5.52□□□□□ -1.53
HMGB1P37-201ENST00000439613 PCDHGA10Q9Y5H3 936 aa5.52□□□□□ -1.53
HMGB1P37-201ENST00000439613 ADGRB3O60242 1522 aa5.52□□□□□ -1.53
HMGB1P37-201ENST00000439613 GPRASP1Q5JY77 1395 aa5.52□□□□□ -1.53
HMGB1P37-201ENST00000439613 MADDQ8WXG6 1647 aa5.52□□□□□ -1.53
HMGB1P37-201ENST00000439613 ERBB3P21860 1342 aa5.51□□□□□ -1.53
HMGB1P37-201ENST00000439613 SYNMO15061 1565 aa5.51□□□□□ -1.53
HMGB1P37-201ENST00000439613 MROH2AA6NES4 1674 aa5.51□□□□□ -1.53
HMGB1P37-201ENST00000439613 DDX10Q13206 875 aaKnown RBP5.51□□□□□ -1.53
HMGB1P37-201ENST00000439613 TYW1BQ6NUM6 668 aa5.51□□□□□ -1.53
HMGB1P37-201ENST00000439613 HIRIP3Q9BW71 556 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P37-201ENST00000439613 PPLO60437 1756 aa5.51□□□□□ -1.53
HMGB1P37-201ENST00000439613 UGGT1Q9NYU2 1555 aa5.5□□□□□ -1.53
HMGB1P37-201ENST00000439613 ZFYVE9O95405 1425 aa5.5□□□□□ -1.53
HMGB1P37-201ENST00000439613 IDI1Q13907 227 aa5.5□□□□□ -1.53
HMGB1P37-201ENST00000439613 MLECQ14165 292 aa5.5□□□□□ -1.53
HMGB1P37-201ENST00000439613 PPP4R3BQ5MIZ7 849 aa5.5□□□□□ -1.53
HMGB1P37-201ENST00000439613 LCE2DQ5TA82 110 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P37-201ENST00000439613 FBXW7Q969H0 707 aa5.5□□□□□ -1.53
HMGB1P37-201ENST00000439613 ZDHHC16Q969W1 377 aa5.5□□□□□ -1.53
HMGB1P37-201ENST00000439613 RBM33Q96EV2 1170 aaKnown RBP5.5□□□□□ -1.53
HMGB1P37-201ENST00000439613 CCDC7Q96M83 1385 aa5.5□□□□□ -1.53
HMGB1P37-201ENST00000439613 ERVK-7P63135 1459 aa5.5□□□□□ -1.53
HMGB1P37-201ENST00000439613 NRXN1Q9ULB1 1477 aa5.5□□□□□ -1.53
HMGB1P37-201ENST00000439613 SPATA31D1Q6ZQQ2 1576 aa5.5□□□□□ -1.53
HMGB1P37-201ENST00000439613 FAM205CA6NFA0 338 aa5.49□□□□□ -1.53
HMGB1P37-201ENST00000439613 HDGFP51858 240 aaKnown RBP5.49□□□□□ -1.53
HMGB1P37-201ENST00000439613 VARS2Q5ST30 1063 aaKnown RBP5.49□□□□□ -1.53
HMGB1P37-201ENST00000439613 EIF3AQ14152 1382 aaKnown RBP5.49□□□□□ -1.53
HMGB1P37-201ENST00000439613 ZMYM3Q14202 1370 aa5.49□□□□□ -1.53
HMGB1P37-201ENST00000439613 KDM5AP29375 1690 aaKnown RBP5.49□□□□□ -1.53
HMGB1P37-201ENST00000439613 WASHC2AQ641Q2 1341 aa5.48□□□□□ -1.53
HMGB1P37-201ENST00000439613 TMEM131LA2VDJ0 1609 aa5.48□□□□□ -1.53
HMGB1P37-201ENST00000439613 MYO5BQ9ULV0 1848 aa5.48□□□□□ -1.53
HMGB1P37-201ENST00000439613 IQGAP1P46940 1657 aa5.48□□□□□ -1.53
HMGB1P37-201ENST00000439613 SETBP1Q9Y6X0 1596 aa5.48□□□□□ -1.53
HMGB1P37-201ENST00000439613 SCAF11Q99590 1463 aaKnown RBP5.48□□□□□ -1.53
HMGB1P37-201ENST00000439613 ST20-MTHFSA0A0A6YYL1 179 aa5.48□□□□□ -1.53
HMGB1P37-201ENST00000439613 NUTM2FA1L443 756 aa5.48□□□□□ -1.53
HMGB1P37-201ENST00000439613 MAP3K7O43318 606 aa5.48□□□□□ -1.53
HMGB1P37-201ENST00000439613 EN1Q05925 392 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P37-201ENST00000439613 NBPF1Q3BBV0 1214 aa5.48□□□□□ -1.53
HMGB1P37-201ENST00000439613 CDCA8Q53HL2 280 aa5.48□□□□□ -1.53
HMGB1P37-201ENST00000439613 FBXO31Q5XUX0 539 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P37-201ENST00000439613 GPIHBP1Q8IV16 184 aa5.48□□□□□ -1.53
HMGB1P37-201ENST00000439613 ZC3H15Q8WU90 426 aaKnown RBP5.48□□□□□ -1.53
HMGB1P37-201ENST00000439613 C14orf93Q9H972 538 aaKnown RBP5.48□□□□□ -1.53
HMGB1P37-201ENST00000439613 KIF7Q2M1P5 1343 aa5.48□□□□□ -1.53
HMGB1P37-201ENST00000439613 FER1L4A9Z1Z3 1794 aa5.47□□□□□ -1.53
HMGB1P37-201ENST00000439613 TNRQ92752 1358 aa5.47□□□□□ -1.53
HMGB1P37-201ENST00000439613 ANP32CO43423 234 aa5.47□□□□□ -1.53
HMGB1P37-201ENST00000439613 C6orf132Q5T0Z8 1188 aa5.47□□□□□ -1.53
HMGB1P37-201ENST00000439613 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB1P37-201ENST00000439613 ADAM33Q9BZ11 813 aa5.47□□□□□ -1.53
HMGB1P37-201ENST00000439613 CDHR5Q9HBB8 845 aa5.47□□□□□ -1.53
HMGB1P37-201ENST00000439613 NEXMIFQ5QGS0 1516 aa5.47□□□□□ -1.53
HMGB1P37-201ENST00000439613 PIK3C2GO75747 1445 aa5.47□□□□□ -1.53
HMGB1P37-201ENST00000439613 ADGRF5Q8IZF2 1346 aa5.47□□□□□ -1.53
HMGB1P37-201ENST00000439613 C11orf95C9JLR9 678 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P37-201ENST00000439613 CCER2I3L3R5 266 aa5.46□□□□□ -1.54
HMGB1P37-201ENST00000439613 TMF1P82094 1093 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms