RNA–Protein interactions for RNA: ENST00000438819.1

CLIP4-206, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 4

Gene CLIP4, Length 562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-206ENST00000438819 PPP4CP60510 307 aa9.17□□□□□ -0.94
CLIP4-206ENST00000438819 EIF4G2P78344 907 aaKnown RBP eCLIP9.16□□□□□ -0.94
CLIP4-206ENST00000438819 SCUBE3Q8IX30 993 aa9.16□□□□□ -0.94
CLIP4-206ENST00000438819 CSB-PGBD3P0DP91 1061 aa9.15□□□□□ -0.94
CLIP4-206ENST00000438819 APLP1P51693 650 aa9.15□□□□□ -0.94
CLIP4-206ENST00000438819 NR1H3Q13133 447 aa9.15□□□□□ -0.94
CLIP4-206ENST00000438819 NYAP1Q6ZVC0 841 aa9.15□□□□□ -0.94
CLIP4-206ENST00000438819 FMNL1O95466 1100 aaPredicted RBP9.14□□□□□ -0.95
CLIP4-206ENST00000438819 NPM2Q86SE8 214 aaKnown RBP9.14□□□□□ -0.95
CLIP4-206ENST00000438819 THAP11Q96EK4 314 aa9.14□□□□□ -0.95
CLIP4-206ENST00000438819 TSR3Q9UJK0 312 aaKnown RBP9.14□□□□□ -0.95
CLIP4-206ENST00000438819 HPS5Q9UPZ3 1129 aa9.14□□□□□ -0.95
CLIP4-206ENST00000438819 USTQ9Y2C2 406 aa9.14□□□□□ -0.95
CLIP4-206ENST00000438819 NR1I2O75469 434 aa9.13□□□□□ -0.95
CLIP4-206ENST00000438819 F12P00748 615 aaPredicted RBP9.13□□□□□ -0.95
CLIP4-206ENST00000438819 TBC1D9Q6ZT07 1266 aa9.13□□□□□ -0.95
CLIP4-206ENST00000438819 WBP1LQ9NX94 342 aa9.13□□□□□ -0.95
CLIP4-206ENST00000438819 FKBPLQ9UIM3 349 aa9.13□□□□□ -0.95
CLIP4-206ENST00000438819 PCDHB3Q9Y5E6 796 aa9.13□□□□□ -0.95
CLIP4-206ENST00000438819 MAFBQ9Y5Q3 323 aaPredicted RBP9.13□□□□□ -0.95
CLIP4-206ENST00000438819 ZBBXA8MT70 800 aa9.12□□□□□ -0.95
CLIP4-206ENST00000438819 FBXO45P0C2W1 286 aa9.12□□□□□ -0.95
CLIP4-206ENST00000438819 RANGAP1P46060 587 aaPredicted RBP9.12□□□□□ -0.95
CLIP4-206ENST00000438819 ATG7O95352 703 aa9.11□□□□□ -0.95
CLIP4-206ENST00000438819 JUNDP17535 347 aa9.11□□□□□ -0.95
CLIP4-206ENST00000438819 PTPRNQ16849 979 aa9.11□□□□□ -0.95
CLIP4-206ENST00000438819 CDCA8Q53HL2 280 aa9.11□□□□□ -0.95
CLIP4-206ENST00000438819 GZF1Q9H116 711 aaPredicted RBP9.11□□□□□ -0.95
CLIP4-206ENST00000438819 ATP9BO43861 1147 aa9.1□□□□□ -0.95
CLIP4-206ENST00000438819 BRD1O95696 1058 aa9.1□□□□□ -0.95
CLIP4-206ENST00000438819 MAP10Q9P2G4 905 aa9.1□□□□□ -0.95
CLIP4-206ENST00000438819 ZC3H4Q9UPT8 1303 aaKnown RBP9.09□□□□□ -0.95
CLIP4-206ENST00000438819 PATL2C9JE40 543 aaKnown RBP9.09□□□□□ -0.95
CLIP4-206ENST00000438819 CARNS1A5YM72 827 aa9.08□□□□□ -0.96
CLIP4-206ENST00000438819 CTHP32929 405 aa9.08□□□□□ -0.96
CLIP4-206ENST00000438819 KCNA1Q09470 495 aa9.07□□□□□ -0.96
CLIP4-206ENST00000438819 IFFO2Q5TF58 517 aa9.07□□□□□ -0.96
CLIP4-206ENST00000438819 PIK3CDO00329 1044 aa9.06□□□□□ -0.96
CLIP4-206ENST00000438819 MSS51Q4VC12 460 aa9.06□□□□□ -0.96
CLIP4-206ENST00000438819 KANK4Q5T7N3 995 aaPredicted RBP9.06□□□□□ -0.96
CLIP4-206ENST00000438819 TMCO4Q5TGY1 634 aa9.06□□□□□ -0.96
CLIP4-206ENST00000438819 FAM160A2Q8N612 972 aaPredicted RBP9.06□□□□□ -0.96
CLIP4-206ENST00000438819 NFATC2IPQ8NCF5 419 aa9.06□□□□□ -0.96
CLIP4-206ENST00000438819 VRTNQ9H8Y1 702 aa9.06□□□□□ -0.96
CLIP4-206ENST00000438819 EVA1BQ9NVM1 165 aa9.06□□□□□ -0.96
CLIP4-206ENST00000438819 TMEM88BA6NKF7 163 aa9.05□□□□□ -0.96
CLIP4-206ENST00000438819 DXOO77932 396 aaKnown RBP9.05□□□□□ -0.96
CLIP4-206ENST00000438819 ITGBL1O95965 494 aaPredicted RBP9.05□□□□□ -0.96
CLIP4-206ENST00000438819 CCNYL3P0C7X3 344 aa9.05□□□□□ -0.96
CLIP4-206ENST00000438819 SPSB2Q99619 263 aa9.04□□□□□ -0.96
CLIP4-206ENST00000438819 GPSM3Q9Y4H4 160 aa9.04□□□□□ -0.96
CLIP4-206ENST00000438819 SKIP12755 728 aa9.03□□□□□ -0.96
CLIP4-206ENST00000438819 MMP16P51512 607 aa9.03□□□□□ -0.96
CLIP4-206ENST00000438819 KCNH2Q12809 1159 aa9.03□□□□□ -0.96
CLIP4-206ENST00000438819 PDXDC2PQ6P474 469 aa9.03□□□□□ -0.96
CLIP4-206ENST00000438819 ARMC2Q8NEN0 867 aa9.03□□□□□ -0.96
CLIP4-206ENST00000438819 KCNC4Q03721 635 aa9.02□□□□□ -0.97
CLIP4-206ENST00000438819 PTK2Q05397 1052 aa9.02□□□□□ -0.97
CLIP4-206ENST00000438819 GPKOWQ92917 476 aaPredicted RBP eCLIP9.02□□□□□ -0.97
CLIP4-206ENST00000438819 NUDT12Q9BQG2 462 aa9.02□□□□□ -0.97
CLIP4-206ENST00000438819 USP17L3A6NCW0 530 aa9.01□□□□□ -0.97
CLIP4-206ENST00000438819 USP17L4A6NCW7 530 aa9.01□□□□□ -0.97
CLIP4-206ENST00000438819 ELOAQ14241 798 aaKnown RBP9.01□□□□□ -0.97
CLIP4-206ENST00000438819 USP17L2Q6R6M4 530 aa9.01□□□□□ -0.97
CLIP4-206ENST00000438819 USP17L1Q7RTZ2 530 aa9.01□□□□□ -0.97
CLIP4-206ENST00000438819 PLEKHM2Q8IWE5 1019 aa9.01□□□□□ -0.97
CLIP4-206ENST00000438819 FAM174AQ8TBP5 190 aa9.01□□□□□ -0.97
CLIP4-206ENST00000438819 CEP126Q9P2H0 1117 aa9.01□□□□□ -0.97
CLIP4-206ENST00000438819 USP17L5A8MUK1 530 aa9□□□□□ -0.97
CLIP4-206ENST00000438819 MFAP1P55081 439 aaKnown RBP9□□□□□ -0.97
CLIP4-206ENST00000438819 MCCD1P59942 119 aaPredicted RBP9□□□□□ -0.97
CLIP4-206ENST00000438819 COPS2P61201 443 aa9□□□□□ -0.97
CLIP4-206ENST00000438819 RGS22Q8NE09 1264 aa9□□□□□ -0.97
CLIP4-206ENST00000438819 ZNF592Q92610 1267 aa9□□□□□ -0.97
CLIP4-206ENST00000438819 OCSTAMPQ9BR26 566 aa9□□□□□ -0.97
CLIP4-206ENST00000438819 PRDM9Q9NQV7 894 aa9□□□□□ -0.97
CLIP4-206ENST00000438819 NBPF14Q5TI25 921 aa8.99□□□□□ -0.97
CLIP4-206ENST00000438819 A0A0G2JS52 829 aa8.98□□□□□ -0.97
CLIP4-206ENST00000438819 SLFNL1Q499Z3 407 aa8.98□□□□□ -0.97
CLIP4-206ENST00000438819 DEPDC4Q8N2C3 294 aa8.98□□□□□ -0.97
CLIP4-206ENST00000438819 PHTF2Q8N3S3 785 aa8.98□□□□□ -0.97
CLIP4-206ENST00000438819 PCDHB9Q9Y5E1 797 aa8.98□□□□□ -0.97
CLIP4-206ENST00000438819 ZMIZ1Q9ULJ6 1067 aa8.97□□□□□ -0.97
CLIP4-206ENST00000438819 MTMR7Q9Y216 660 aa8.97□□□□□ -0.97
CLIP4-206ENST00000438819 ZPR1O75312 459 aa8.96□□□□□ -0.98
CLIP4-206ENST00000438819 ADH1BP00325 375 aa8.96□□□□□ -0.98
CLIP4-206ENST00000438819 TMEM164Q5U3C3 297 aa8.96□□□□□ -0.98
CLIP4-206ENST00000438819 RNF135Q8IUD6 432 aa8.96□□□□□ -0.98
CLIP4-206ENST00000438819 ADAM32Q8TC27 787 aa8.96□□□□□ -0.98
CLIP4-206ENST00000438819 STK32AQ8WU08 396 aa8.96□□□□□ -0.98
CLIP4-206ENST00000438819 ARHGAP9Q9BRR9 750 aa8.96□□□□□ -0.98
CLIP4-206ENST00000438819 MKRN1Q9UHC7 482 aaKnown RBP8.96□□□□□ -0.98
CLIP4-206ENST00000438819 NOVA2Q9UNW9 492 aaKnown RBP8.96□□□□□ -0.98
CLIP4-206ENST00000438819 IVNS1ABPQ9Y6Y0 642 aa8.96□□□□□ -0.98
CLIP4-206ENST00000438819 FAM196BA6NMK8 535 aa8.95□□□□□ -0.98
CLIP4-206ENST00000438819 TLL1O43897 1013 aa8.95□□□□□ -0.98
CLIP4-206ENST00000438819 LZTS3O60299 673 aaPredicted RBP8.95□□□□□ -0.98
CLIP4-206ENST00000438819 RGS20O76081 388 aa8.95□□□□□ -0.98
CLIP4-206ENST00000438819 TJAP1Q5JTD0 557 aa8.95□□□□□ -0.98
CLIP4-206ENST00000438819 PTCRAQ6ISU1 281 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms