RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 ABCA3Q99758 1704 aa12.96□□□□□ -0.33
SCRN1-208ENST00000438497 TNS1Q9HBL0 1735 aaKnown RBP12.96□□□□□ -0.33
SCRN1-208ENST00000438497 GPRASP1Q5JY77 1395 aa12.96□□□□□ -0.33
SCRN1-208ENST00000438497 DHX57Q6P158 1386 aaKnown RBP12.96□□□□□ -0.33
SCRN1-208ENST00000438497 SPATA31A1Q5TZJ5 1347 aa12.96□□□□□ -0.33
SCRN1-208ENST00000438497 PAK3O75914 559 aaPredicted RBP12.96□□□□□ -0.33
SCRN1-208ENST00000438497 PRAM1Q96QH2 718 aa12.96□□□□□ -0.33
SCRN1-208ENST00000438497 C14orf93Q9H972 538 aaKnown RBP12.96□□□□□ -0.33
SCRN1-208ENST00000438497 STRN4Q9NRL3 753 aa12.96□□□□□ -0.33
SCRN1-208ENST00000438497 USP35Q9P2H5 1018 aa12.95□□□□□ -0.34
SCRN1-208ENST00000438497 KNDC1Q76NI1 1749 aa12.95□□□□□ -0.34
SCRN1-208ENST00000438497 IFT172Q9UG01 1749 aa12.95□□□□□ -0.34
SCRN1-208ENST00000438497 EVA1CP58658 441 aa12.94□□□□□ -0.34
SCRN1-208ENST00000438497 CFAP70Q5T0N1 1121 aa12.94□□□□□ -0.34
SCRN1-208ENST00000438497 NGDNQ8NEJ9 315 aaKnown RBP12.94□□□□□ -0.34
SCRN1-208ENST00000438497 CHRNA2Q15822 529 aa12.93□□□□□ -0.34
SCRN1-208ENST00000438497 ADGRB2O60241 1585 aa12.93□□□□□ -0.34
SCRN1-208ENST00000438497 THSD7AQ9UPZ6 1657 aa12.93□□□□□ -0.34
SCRN1-208ENST00000438497 NINLQ9Y2I6 1382 aa12.92□□□□□ -0.34
SCRN1-208ENST00000438497 ACIN1Q9UKV3 1341 aaKnown RBP12.91□□□□□ -0.34
SCRN1-208ENST00000438497 ZC3H6P61129 1189 aaKnown RBP12.91□□□□□ -0.34
SCRN1-208ENST00000438497 ZNF784Q8NCA9 323 aaPredicted RBP12.91□□□□□ -0.34
SCRN1-208ENST00000438497 HIRIP3Q9BW71 556 aaPredicted RBP12.91□□□□□ -0.34
SCRN1-208ENST00000438497 PIK3C2GO75747 1445 aa12.9□□□□□ -0.34
SCRN1-208ENST00000438497 SPATA31E1Q6ZUB1 1445 aa12.9□□□□□ -0.34
SCRN1-208ENST00000438497 ANKARQ7Z5J8 1434 aa12.9□□□□□ -0.34
SCRN1-208ENST00000438497 SENP3-EIF4A1A0A087X0R7 540 aa12.9□□□□□ -0.34
SCRN1-208ENST00000438497 BARGINQ6ZT62 677 aa12.9□□□□□ -0.34
SCRN1-208ENST00000438497 KIAA0232Q92628 1395 aa12.89□□□□□ -0.35
SCRN1-208ENST00000438497 ALS2Q96Q42 1657 aa12.89□□□□□ -0.35
SCRN1-208ENST00000438497 TRPM3Q9HCF6 1732 aaPredicted RBP12.88□□□□□ -0.35
SCRN1-208ENST00000438497 IFFO2Q5TF58 517 aa12.88□□□□□ -0.35
SCRN1-208ENST00000438497 RREB1Q92766 1687 aa12.88□□□□□ -0.35
SCRN1-208ENST00000438497 NUP188Q5SRE5 1749 aa12.88□□□□□ -0.35
SCRN1-208ENST00000438497 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
SCRN1-208ENST00000438497 NUTM2GQ5VZR2 741 aa12.87□□□□□ -0.35
SCRN1-208ENST00000438497 TCP11L2Q8N4U5 519 aa12.87□□□□□ -0.35
SCRN1-208ENST00000438497 MPHOSPH9Q99550 1183 aa12.87□□□□□ -0.35
SCRN1-208ENST00000438497 TRAK1Q9UPV9 953 aa12.87□□□□□ -0.35
SCRN1-208ENST00000438497 PRR36Q9H6K5 1346 aa12.87□□□□□ -0.35
SCRN1-208ENST00000438497 C11orf95C9JLR9 678 aaPredicted RBP12.86□□□□□ -0.35
SCRN1-208ENST00000438497 WASLO00401 505 aaPredicted RBP12.86□□□□□ -0.35
SCRN1-208ENST00000438497 PLSCR1O15162 318 aa12.86□□□□□ -0.35
SCRN1-208ENST00000438497 C1QTNF8P60827 252 aa12.86□□□□□ -0.35
SCRN1-208ENST00000438497 LARP1Q6PKG0 1096 aaKnown RBP12.86□□□□□ -0.35
SCRN1-208ENST00000438497 CAMTA1Q9Y6Y1 1673 aa12.86□□□□□ -0.35
SCRN1-208ENST00000438497 ATF5Q9Y2D1 282 aaPredicted RBP12.85□□□□□ -0.35
SCRN1-208ENST00000438497 ZBTB7AO95365 584 aa12.84□□□□□ -0.35
SCRN1-208ENST00000438497 THRAP3Q9Y2W1 955 aaKnown RBP12.84□□□□□ -0.35
SCRN1-208ENST00000438497 EIF3AQ14152 1382 aaKnown RBP12.83□□□□□ -0.36
SCRN1-208ENST00000438497 BCL11BQ9C0K0 894 aaPredicted RBP12.83□□□□□ -0.36
SCRN1-208ENST00000438497 PDGFDQ9GZP0 370 aaPredicted RBP12.83□□□□□ -0.36
SCRN1-208ENST00000438497 SSH2Q76I76 1423 aa12.82□□□□□ -0.36
SCRN1-208ENST00000438497 NUDT16Q96DE0 195 aaKnown RBP12.82□□□□□ -0.36
SCRN1-208ENST00000438497 SYT17Q9BSW7 474 aa12.82□□□□□ -0.36
SCRN1-208ENST00000438497 CRYBG1Q9Y4K1 1723 aa12.82□□□□□ -0.36
SCRN1-208ENST00000438497 ANO8Q9HCE9 1232 aaPredicted RBP12.81□□□□□ -0.36
SCRN1-208ENST00000438497 DLC1Q96QB1 1528 aa12.81□□□□□ -0.36
SCRN1-208ENST00000438497 PTGER2P43116 358 aa12.8□□□□□ -0.36
SCRN1-208ENST00000438497 PROM2Q8N271 834 aa12.8□□□□□ -0.36
SCRN1-208ENST00000438497 ABTB2Q8N961 1025 aa12.8□□□□□ -0.36
SCRN1-208ENST00000438497 FHDC1Q9C0D6 1143 aaPredicted RBP12.8□□□□□ -0.36
SCRN1-208ENST00000438497 TULP4Q9NRJ4 1543 aa12.79□□□□□ -0.36
SCRN1-208ENST00000438497 CHD4Q14839 1912 aa12.78□□□□□ -0.36
SCRN1-208ENST00000438497 DDB1Q16531 1140 aa12.78□□□□□ -0.36
SCRN1-208ENST00000438497 PTF1AQ7RTS3 328 aa12.78□□□□□ -0.36
SCRN1-208ENST00000438497 STK32BQ9NY57 414 aa12.78□□□□□ -0.36
SCRN1-208ENST00000438497 KDM2AQ9Y2K7 1162 aa12.78□□□□□ -0.36
SCRN1-208ENST00000438497 ACEP12821 1306 aa12.77□□□□□ -0.37
SCRN1-208ENST00000438497 NRKQ7Z2Y5 1582 aa12.77□□□□□ -0.37
SCRN1-208ENST00000438497 ZBTB7CA1YPR0 619 aa12.76□□□□□ -0.37
SCRN1-208ENST00000438497 GCP02774 474 aa12.76□□□□□ -0.37
SCRN1-208ENST00000438497 SLC15A2Q16348 729 aa12.76□□□□□ -0.37
SCRN1-208ENST00000438497 NLRP13Q86W25 1043 aa12.76□□□□□ -0.37
SCRN1-208ENST00000438497 CDK19Q9BWU1 502 aa12.76□□□□□ -0.37
SCRN1-208ENST00000438497 OVOS2A0A0G2JMS6 1433 aa12.76□□□□□ -0.37
SCRN1-208ENST00000438497 OVOS2A0A0J9YW53 1432 aa12.76□□□□□ -0.37
SCRN1-208ENST00000438497 OVOS2Q6IE36 1432 aa12.76□□□□□ -0.37
SCRN1-208ENST00000438497 PHRF1Q9P1Y6 1649 aaKnown RBP12.76□□□□□ -0.37
SCRN1-208ENST00000438497 TXNRD1Q16881 649 aa12.75□□□□□ -0.37
SCRN1-208ENST00000438497 CASZ1Q86V15 1759 aa12.75□□□□□ -0.37
SCRN1-208ENST00000438497 SBF2Q86WG5 1849 aa12.75□□□□□ -0.37
SCRN1-208ENST00000438497 MTFR1LQ9H019 292 aa12.75□□□□□ -0.37
SCRN1-208ENST00000438497 CCDC61Q9Y6R9 512 aa12.75□□□□□ -0.37
SCRN1-208ENST00000438497 ATP7BP35670 1465 aa12.74□□□□□ -0.37
SCRN1-208ENST00000438497 CPDO75976 1380 aa12.74□□□□□ -0.37
SCRN1-208ENST00000438497 PLEKHG3A1L390 1219 aa12.74□□□□□ -0.37
SCRN1-208ENST00000438497 GPR162Q16538 588 aa12.74□□□□□ -0.37
SCRN1-208ENST00000438497 ARXQ96QS3 562 aa12.74□□□□□ -0.37
SCRN1-208ENST00000438497 PARP4Q9UKK3 1724 aaKnown RBP12.74□□□□□ -0.37
SCRN1-208ENST00000438497 GIGYF1O75420 1035 aaPredicted RBP12.73□□□□□ -0.37
SCRN1-208ENST00000438497 TOM1L2Q6ZVM7 507 aa12.73□□□□□ -0.37
SCRN1-208ENST00000438497 MARCH10Q8NA82 808 aaPredicted RBP12.73□□□□□ -0.37
SCRN1-208ENST00000438497 DCAF11Q8TEB1 546 aa12.73□□□□□ -0.37
SCRN1-208ENST00000438497 MYOM1P52179 1685 aa12.73□□□□□ -0.37
SCRN1-208ENST00000438497 CRB1P82279 1406 aa12.72□□□□□ -0.37
SCRN1-208ENST00000438497 SGIP1Q9BQI5 828 aa12.72□□□□□ -0.37
SCRN1-208ENST00000438497 ADGRB1O14514 1584 aa12.72□□□□□ -0.37
SCRN1-208ENST00000438497 RGPD3A6NKT7 1758 aaPredicted RBP12.71□□□□□ -0.37
SCRN1-208ENST00000438497 RGPD4Q7Z3J3 1758 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms