RNA–Protein interactions for RNA: ENST00000438169.6

KRR1-202, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 1 (best) BASIC

Gene KRR1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-202ENST00000438169 ARHGEF15O94989 841 aa8.65□□□□□ -1.02
KRR1-202ENST00000438169 USP46P62068 366 aa8.65□□□□□ -1.02
KRR1-202ENST00000438169 RETREG3Q86VR2 466 aa8.65□□□□□ -1.02
KRR1-202ENST00000438169 ITPKCQ96DU7 683 aa8.65□□□□□ -1.02
KRR1-202ENST00000438169 KRTAP9-2Q9BYQ4 174 aa8.65□□□□□ -1.02
KRR1-202ENST00000438169 CCNYL3P0C7X3 344 aa8.64□□□□□ -1.03
KRR1-202ENST00000438169 ZNF511Q8NB15 262 aa8.64□□□□□ -1.03
KRR1-202ENST00000438169 COL25A1Q9BXS0 654 aaPredicted RBP8.64□□□□□ -1.03
KRR1-202ENST00000438169 PLEKHG3A1L390 1219 aa8.63□□□□□ -1.03
KRR1-202ENST00000438169 ZIC2O95409 532 aaPredicted RBP8.63□□□□□ -1.03
KRR1-202ENST00000438169 VARSP26640 1264 aaKnown RBP8.63□□□□□ -1.03
KRR1-202ENST00000438169 SOS2Q07890 1332 aaPredicted RBP8.62□□□□□ -1.03
KRR1-202ENST00000438169 ADAM23O75077 832 aa8.62□□□□□ -1.03
KRR1-202ENST00000438169 NR3C2P08235 984 aa8.62□□□□□ -1.03
KRR1-202ENST00000438169 SVOPQ8N4V2 548 aa8.62□□□□□ -1.03
KRR1-202ENST00000438169 EVA1BQ9NVM1 165 aa8.62□□□□□ -1.03
KRR1-202ENST00000438169 PCDHGC3Q9UN70 934 aa8.62□□□□□ -1.03
KRR1-202ENST00000438169 KRTAP9-6A0A140TA67 174 aa8.61□□□□□ -1.03
KRR1-202ENST00000438169 ITGB2P05107 769 aa8.6□□□□□ -1.03
KRR1-202ENST00000438169 MS4A1P11836 297 aa8.6□□□□□ -1.03
KRR1-202ENST00000438169 LINC00528Q8N1L1 170 aa8.59□□□□□ -1.03
KRR1-202ENST00000438169 SLURP2P0DP57 97 aa8.58□□□□□ -1.04
KRR1-202ENST00000438169 BMP2P12643 396 aa8.58□□□□□ -1.04
KRR1-202ENST00000438169 FOXK2Q01167 660 aa8.58□□□□□ -1.04
KRR1-202ENST00000438169 KCNH2Q12809 1159 aa8.58□□□□□ -1.04
KRR1-202ENST00000438169 PTPRNQ16849 979 aa8.58□□□□□ -1.04
KRR1-202ENST00000438169 CDK15Q96Q40 435 aa8.58□□□□□ -1.04
KRR1-202ENST00000438169 MDM2Q00987 491 aaPredicted RBP8.57□□□□□ -1.04
KRR1-202ENST00000438169 MEIOBQ8N635 442 aa8.57□□□□□ -1.04
KRR1-202ENST00000438169 RTN4Q9NQC3 1192 aaKnown RBP8.57□□□□□ -1.04
KRR1-202ENST00000438169 PTSQ03393 145 aa8.56□□□□□ -1.04
KRR1-202ENST00000438169 KANK3Q6NY19 840 aa8.56□□□□□ -1.04
KRR1-202ENST00000438169 NANOS1Q8WY41 292 aaKnown RBP8.56□□□□□ -1.04
KRR1-202ENST00000438169 GRM5P41594 1212 aa8.55□□□□□ -1.04
KRR1-202ENST00000438169 PLA2G4EQ3MJ16 856 aa8.54□□□□□ -1.04
KRR1-202ENST00000438169 FOXJ1Q92949 421 aa8.54□□□□□ -1.04
KRR1-202ENST00000438169 C6orf229H3BNL8 230 aa8.53□□□□□ -1.04
KRR1-202ENST00000438169 ARID5BQ14865 1188 aa8.53□□□□□ -1.04
KRR1-202ENST00000438169 C4orf48Q5BLP8 95 aa8.53□□□□□ -1.04
KRR1-202ENST00000438169 P3H3Q8IVL6 736 aa8.53□□□□□ -1.04
KRR1-202ENST00000438169 PSMG3-AS1Q96PY0 264 aa8.53□□□□□ -1.04
KRR1-202ENST00000438169 FDX1P10109 184 aa8.52□□□□□ -1.05
KRR1-202ENST00000438169 FAM174AQ8TBP5 190 aa8.52□□□□□ -1.05
KRR1-202ENST00000438169 SPOCK3Q9BQ16 436 aa8.52□□□□□ -1.05
KRR1-202ENST00000438169 MARSP56192 900 aaKnown RBP8.51□□□□□ -1.05
KRR1-202ENST00000438169 LYPD4Q6UWN0 246 aa8.51□□□□□ -1.05
KRR1-202ENST00000438169 PROCP04070 461 aa8.5□□□□□ -1.05
KRR1-202ENST00000438169 NR5A1Q13285 461 aa8.5□□□□□ -1.05
KRR1-202ENST00000438169 CCDC155Q8N6L0 562 aa8.5□□□□□ -1.05
KRR1-202ENST00000438169 MSTNO14793 375 aa8.49□□□□□ -1.05
KRR1-202ENST00000438169 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.49□□□□□ -1.05
KRR1-202ENST00000438169 GPIHBP1Q8IV16 184 aa8.49□□□□□ -1.05
KRR1-202ENST00000438169 SCARF2Q96GP6 870 aaPredicted RBP8.49□□□□□ -1.05
KRR1-202ENST00000438169 FAM217BQ9NTX9 383 aaPredicted RBP8.49□□□□□ -1.05
KRR1-202ENST00000438169 FIGNL2A6NMB9 653 aa8.48□□□□□ -1.05
KRR1-202ENST00000438169 UPP2O95045 317 aa8.48□□□□□ -1.05
KRR1-202ENST00000438169 AMER1Q5JTC6 1135 aaPredicted RBP8.48□□□□□ -1.05
KRR1-202ENST00000438169 SMYD5Q6GMV2 418 aa8.48□□□□□ -1.05
KRR1-202ENST00000438169 VWA5B2Q8N398 1253 aa8.48□□□□□ -1.05
KRR1-202ENST00000438169 PRR7Q8TB68 274 aa8.48□□□□□ -1.05
KRR1-202ENST00000438169 SLC35F4A4IF30 521 aa8.47□□□□□ -1.05
KRR1-202ENST00000438169 TTLL8A6PVC2 850 aa8.47□□□□□ -1.05
KRR1-202ENST00000438169 MAP2K5Q13163 448 aa8.47□□□□□ -1.05
KRR1-202ENST00000438169 KRTAP1-3Q8IUG1 177 aa8.47□□□□□ -1.05
KRR1-202ENST00000438169 DCAF5Q96JK2 942 aa8.47□□□□□ -1.05
KRR1-202ENST00000438169 NDUFV2P19404 249 aa8.46□□□□□ -1.06
KRR1-202ENST00000438169 NUTM1Q86Y26 1132 aa8.46□□□□□ -1.06
KRR1-202ENST00000438169 Q8N3U1 123 aa8.46□□□□□ -1.06
KRR1-202ENST00000438169 IRF6O14896 467 aa8.45□□□□□ -1.06
KRR1-202ENST00000438169 ADAMTS2O95450 1211 aa8.45□□□□□ -1.06
KRR1-202ENST00000438169 ITGA6P23229 1130 aa8.44□□□□□ -1.06
KRR1-202ENST00000438169 CDC14CA4D256 554 aa8.43□□□□□ -1.06
KRR1-202ENST00000438169 DESI1Q6ICB0 168 aa8.43□□□□□ -1.06
KRR1-202ENST00000438169 TSEN34Q9BSV6 310 aaKnown RBP8.43□□□□□ -1.06
KRR1-202ENST00000438169 MAP10Q9P2G4 905 aa8.43□□□□□ -1.06
KRR1-202ENST00000438169 CNTNAP5Q8WYK1 1306 aa8.43□□□□□ -1.06
KRR1-202ENST00000438169 SPTLC1O15269 473 aa8.42□□□□□ -1.06
KRR1-202ENST00000438169 CELA2BP08218 269 aaPredicted RBP8.42□□□□□ -1.06
KRR1-202ENST00000438169 CTHP32929 405 aa8.42□□□□□ -1.06
KRR1-202ENST00000438169 GPCPD1Q9NPB8 672 aa8.42□□□□□ -1.06
KRR1-202ENST00000438169 MOXD2PA6NHM9 499 aa8.41□□□□□ -1.06
KRR1-202ENST00000438169 F12P00748 615 aaPredicted RBP8.41□□□□□ -1.06
KRR1-202ENST00000438169 SPIRE2Q8WWL2 714 aa8.41□□□□□ -1.06
KRR1-202ENST00000438169 FSHRP23945 695 aa8.4□□□□□ -1.06
KRR1-202ENST00000438169 GAS6Q14393 721 aa8.4□□□□□ -1.06
KRR1-202ENST00000438169 LYPD8Q6UX82 237 aa8.4□□□□□ -1.06
KRR1-202ENST00000438169 SV2AQ7L0J3 742 aa8.4□□□□□ -1.06
KRR1-202ENST00000438169 CBLBQ13191 982 aa8.39□□□□□ -1.07
KRR1-202ENST00000438169 SH3RF1Q7Z6J0 888 aa8.39□□□□□ -1.07
KRR1-202ENST00000438169 SENP3-EIF4A1A0A087X0R7 540 aa8.38□□□□□ -1.07
KRR1-202ENST00000438169 K7ELQ4 463 aaPredicted RBP8.38□□□□□ -1.07
KRR1-202ENST00000438169 SPINT1O43278 529 aa8.38□□□□□ -1.07
KRR1-202ENST00000438169 MTMR2Q13614 643 aa8.38□□□□□ -1.07
KRR1-202ENST00000438169 CCDC102AQ96A19 550 aa8.38□□□□□ -1.07
KRR1-202ENST00000438169 C1QTNF2Q9BXJ5 285 aa8.38□□□□□ -1.07
KRR1-202ENST00000438169 SRSF11Q05519 484 aaKnown RBP8.37□□□□□ -1.07
KRR1-202ENST00000438169 CFAP99D6REC4 459 aa8.36□□□□□ -1.07
KRR1-202ENST00000438169 CLCN1P35523 988 aa8.36□□□□□ -1.07
KRR1-202ENST00000438169 CTSOP43234 321 aaPredicted RBP8.35□□□□□ -1.07
KRR1-202ENST00000438169 AGERQ15109 404 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms