RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 SPATA31A7Q8IWB4 1347 aa20.92■□□□□ 0.94
LINC01088-201ENST00000437737 DISP2A7MBM2 1401 aa20.92■□□□□ 0.94
LINC01088-201ENST00000437737 EZH2Q15910 746 aaKnown RBP20.91■□□□□ 0.94
LINC01088-201ENST00000437737 DLC1Q96QB1 1528 aa20.91■□□□□ 0.94
LINC01088-201ENST00000437737 CRYBG1Q9Y4K1 1723 aa20.9■□□□□ 0.94
LINC01088-201ENST00000437737 ACIN1Q9UKV3 1341 aaKnown RBP20.88■□□□□ 0.93
LINC01088-201ENST00000437737 HIRIP3Q9BW71 556 aaPredicted RBP20.88■□□□□ 0.93
LINC01088-201ENST00000437737 PRDM11Q9NQV5 511 aa20.88■□□□□ 0.93
LINC01088-201ENST00000437737 EIF3AQ14152 1382 aaKnown RBP20.87■□□□□ 0.93
LINC01088-201ENST00000437737 PAK3O75914 559 aaPredicted RBP20.87■□□□□ 0.93
LINC01088-201ENST00000437737 TULP4Q9NRJ4 1543 aa20.86■□□□□ 0.93
LINC01088-201ENST00000437737 TRIM37O94972 964 aa20.85■□□□□ 0.93
LINC01088-201ENST00000437737 MINK1Q8N4C8 1332 aaPredicted RBP20.84■□□□□ 0.93
LINC01088-201ENST00000437737 FAM196AQ6ZSG2 479 aa20.84■□□□□ 0.93
LINC01088-201ENST00000437737 NGDNQ8NEJ9 315 aaKnown RBP20.84■□□□□ 0.93
LINC01088-201ENST00000437737 CAMKK2Q96RR4 588 aa20.84■□□□□ 0.93
LINC01088-201ENST00000437737 SPATA31A1Q5TZJ5 1347 aa20.83■□□□□ 0.93
LINC01088-201ENST00000437737 PRR36Q9H6K5 1346 aa20.83■□□□□ 0.93
LINC01088-201ENST00000437737 APBA3O96018 575 aa20.83■□□□□ 0.93
LINC01088-201ENST00000437737 STRN4Q9NRL3 753 aa20.83■□□□□ 0.93
LINC01088-201ENST00000437737 TRAK1Q9UPV9 953 aa20.83■□□□□ 0.93
LINC01088-201ENST00000437737 PARD3Q8TEW0 1356 aa20.82■□□□□ 0.92
LINC01088-201ENST00000437737 PHRF1Q9P1Y6 1649 aaKnown RBP20.82■□□□□ 0.92
LINC01088-201ENST00000437737 ADGRB1O14514 1584 aa20.81■□□□□ 0.92
LINC01088-201ENST00000437737 RREB1Q92766 1687 aa20.81■□□□□ 0.92
LINC01088-201ENST00000437737 KIAA0232Q92628 1395 aa20.81■□□□□ 0.92
LINC01088-201ENST00000437737 ITSN1Q15811 1721 aa20.81■□□□□ 0.92
LINC01088-201ENST00000437737 YY1P25490 414 aa20.8■□□□□ 0.92
LINC01088-201ENST00000437737 CHRNA2Q15822 529 aa20.8■□□□□ 0.92
LINC01088-201ENST00000437737 NUP188Q5SRE5 1749 aa20.8■□□□□ 0.92
LINC01088-201ENST00000437737 WASLO00401 505 aaPredicted RBP20.79■□□□□ 0.92
LINC01088-201ENST00000437737 USP35Q9P2H5 1018 aa20.79■□□□□ 0.92
LINC01088-201ENST00000437737 PDE3BQ13370 1112 aa20.77■□□□□ 0.92
LINC01088-201ENST00000437737 NBPF8Q3BBV2 869 aa20.77■□□□□ 0.92
LINC01088-201ENST00000437737 NBPF14Q5TI25 921 aa20.77■□□□□ 0.92
LINC01088-201ENST00000437737 EVA1CP58658 441 aa20.75■□□□□ 0.91
LINC01088-201ENST00000437737 ZC3H6P61129 1189 aaKnown RBP20.75■□□□□ 0.91
LINC01088-201ENST00000437737 PPP1R1BQ9UD71 204 aaPredicted RBP20.74■□□□□ 0.91
LINC01088-201ENST00000437737 ATP7BP35670 1465 aa20.74■□□□□ 0.91
LINC01088-201ENST00000437737 NUTM2GQ5VZR2 741 aa20.73■□□□□ 0.91
LINC01088-201ENST00000437737 SSH2Q76I76 1423 aa20.72■□□□□ 0.91
LINC01088-201ENST00000437737 BARGINQ6ZT62 677 aa20.72■□□□□ 0.91
LINC01088-201ENST00000437737 ARHGEF28Q8N1W1 1705 aaKnown RBP20.71■□□□□ 0.91
LINC01088-201ENST00000437737 DCAF8L1A6NGE4 600 aa20.71■□□□□ 0.91
LINC01088-201ENST00000437737 KDM2AQ9Y2K7 1162 aa20.71■□□□□ 0.91
LINC01088-201ENST00000437737 NUDT16Q96DE0 195 aaKnown RBP20.7■□□□□ 0.9
LINC01088-201ENST00000437737 NRKQ7Z2Y5 1582 aa20.69■□□□□ 0.9
LINC01088-201ENST00000437737 SPON1Q9HCB6 807 aa20.69■□□□□ 0.9
LINC01088-201ENST00000437737 TCP11L2Q8N4U5 519 aa20.68■□□□□ 0.9
LINC01088-201ENST00000437737 LARP1Q6PKG0 1096 aaKnown RBP20.67■□□□□ 0.9
LINC01088-201ENST00000437737 DCAF11Q8TEB1 546 aa20.67■□□□□ 0.9
LINC01088-201ENST00000437737 CAMTA1Q9Y6Y1 1673 aa20.67■□□□□ 0.9
LINC01088-201ENST00000437737 KCNQ2O43526 872 aa20.66■□□□□ 0.9
LINC01088-201ENST00000437737 TOPAZ1Q8N9V7 1692 aa20.66■□□□□ 0.9
LINC01088-201ENST00000437737 PARP4Q9UKK3 1724 aaKnown RBP20.65■□□□□ 0.9
LINC01088-201ENST00000437737 LMO7Q8WWI1 1683 aa20.65■□□□□ 0.9
LINC01088-201ENST00000437737 NINLQ9Y2I6 1382 aa20.65■□□□□ 0.9
LINC01088-201ENST00000437737 ACEP12821 1306 aa20.63■□□□□ 0.89
LINC01088-201ENST00000437737 ABTB2Q8N961 1025 aa20.63■□□□□ 0.89
LINC01088-201ENST00000437737 CDK19Q9BWU1 502 aa20.63■□□□□ 0.89
LINC01088-201ENST00000437737 THRAP3Q9Y2W1 955 aaKnown RBP20.63■□□□□ 0.89
LINC01088-201ENST00000437737 POLR3AO14802 1390 aaPredicted RBP20.62■□□□□ 0.89
LINC01088-201ENST00000437737 RGPD3A6NKT7 1758 aaPredicted RBP20.62■□□□□ 0.89
LINC01088-201ENST00000437737 RGPD4Q7Z3J3 1758 aa20.62■□□□□ 0.89
LINC01088-201ENST00000437737 CPDO75976 1380 aa20.61■□□□□ 0.89
LINC01088-201ENST00000437737 C11orf95C9JLR9 678 aaPredicted RBP20.6■□□□□ 0.89
LINC01088-201ENST00000437737 OVOS2A0A0G2JMS6 1433 aa20.6■□□□□ 0.89
LINC01088-201ENST00000437737 OVOS2A0A0J9YW53 1432 aa20.6■□□□□ 0.89
LINC01088-201ENST00000437737 OVOS2Q6IE36 1432 aa20.6■□□□□ 0.89
LINC01088-201ENST00000437737 CCDC61Q9Y6R9 512 aa20.59■□□□□ 0.89
LINC01088-201ENST00000437737 SBF2Q86WG5 1849 aa20.59■□□□□ 0.89
LINC01088-201ENST00000437737 COL5A2P05997 1499 aaPredicted RBP20.58■□□□□ 0.89
LINC01088-201ENST00000437737 STAC3Q96MF2 364 aa20.58■□□□□ 0.89
LINC01088-201ENST00000437737 PEAK1Q9H792 1746 aa20.58■□□□□ 0.88
LINC01088-201ENST00000437737 USP19O94966 1318 aa20.57■□□□□ 0.88
LINC01088-201ENST00000437737 ZBTB7CA1YPR0 619 aa20.57■□□□□ 0.88
LINC01088-201ENST00000437737 NLRP13Q86W25 1043 aa20.57■□□□□ 0.88
LINC01088-201ENST00000437737 RAB3GAP2Q9H2M9 1393 aa20.57■□□□□ 0.88
LINC01088-201ENST00000437737 CASZ1Q86V15 1759 aa20.57■□□□□ 0.88
LINC01088-201ENST00000437737 LRRC37A3O60309 1634 aa20.56■□□□□ 0.88
LINC01088-201ENST00000437737 CRB1P82279 1406 aa20.56■□□□□ 0.88
LINC01088-201ENST00000437737 PLEKHG3A1L390 1219 aa20.56■□□□□ 0.88
LINC01088-201ENST00000437737 GCP02774 474 aa20.55■□□□□ 0.88
LINC01088-201ENST00000437737 PLSCR1O15162 318 aa20.53■□□□□ 0.88
LINC01088-201ENST00000437737 ANO8Q9HCE9 1232 aaPredicted RBP20.53■□□□□ 0.88
LINC01088-201ENST00000437737 DDB1Q16531 1140 aa20.52■□□□□ 0.88
LINC01088-201ENST00000437737 BCL11BQ9C0K0 894 aaPredicted RBP20.52■□□□□ 0.88
LINC01088-201ENST00000437737 WNK3Q9BYP7 1800 aa20.52■□□□□ 0.88
LINC01088-201ENST00000437737 AKAP12Q02952 1782 aa20.51■□□□□ 0.87
LINC01088-201ENST00000437737 MYOM1P52179 1685 aa20.51■□□□□ 0.87
LINC01088-201ENST00000437737 PPIP5K1Q6PFW1 1433 aa20.51■□□□□ 0.87
LINC01088-201ENST00000437737 ZBTB7AO95365 584 aa20.5■□□□□ 0.87
LINC01088-201ENST00000437737 SRPK2P78362 688 aaKnown RBP20.5■□□□□ 0.87
LINC01088-201ENST00000437737 TOM1L2Q6ZVM7 507 aa20.49■□□□□ 0.87
LINC01088-201ENST00000437737 KIAA1210Q9ULL0 1709 aa20.48■□□□□ 0.87
LINC01088-201ENST00000437737 PDGFDQ9GZP0 370 aaPredicted RBP20.48■□□□□ 0.87
LINC01088-201ENST00000437737 PTF1AQ7RTS3 328 aa20.47■□□□□ 0.87
LINC01088-201ENST00000437737 AATKQ6ZMQ8 1374 aa20.46■□□□□ 0.87
LINC01088-201ENST00000437737 NLRP6P59044 892 aa20.46■□□□□ 0.87
LINC01088-201ENST00000437737 BRD4O60885 1362 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms