RNA–Protein interactions for RNA: ENST00000437124.6

DDR1-237, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-237ENST00000437124 CFAP70Q5T0N1 1121 aa22.21■■□□□ 1.15
DDR1-237ENST00000437124 GPRASP1Q5JY77 1395 aa22.2■■□□□ 1.14
DDR1-237ENST00000437124 FAM182BQ5T319 152 aa22.19■■□□□ 1.14
DDR1-237ENST00000437124 PARD3Q8TEW0 1356 aa22.18■■□□□ 1.14
DDR1-237ENST00000437124 SAFB2Q14151 953 aaKnown RBP eCLIP22.18■■□□□ 1.14
DDR1-237ENST00000437124 EIF3AQ14152 1382 aaKnown RBP22.17■■□□□ 1.14
DDR1-237ENST00000437124 CAMKK2Q96RR4 588 aa22.17■■□□□ 1.14
DDR1-237ENST00000437124 POGKQ9P215 609 aa22.17■■□□□ 1.14
DDR1-237ENST00000437124 EZH2Q15910 746 aaKnown RBP22.16■■□□□ 1.14
DDR1-237ENST00000437124 CRYBG1Q9Y4K1 1723 aa22.16■■□□□ 1.14
DDR1-237ENST00000437124 FAM196AQ6ZSG2 479 aa22.14■■□□□ 1.13
DDR1-237ENST00000437124 TULP4Q9NRJ4 1543 aa22.14■■□□□ 1.13
DDR1-237ENST00000437124 SPATA31A1Q5TZJ5 1347 aa22.13■■□□□ 1.13
DDR1-237ENST00000437124 PRDM11Q9NQV5 511 aa22.13■■□□□ 1.13
DDR1-237ENST00000437124 ADGRB1O14514 1584 aa22.12■■□□□ 1.13
DDR1-237ENST00000437124 PRR36Q9H6K5 1346 aa22.12■■□□□ 1.13
DDR1-237ENST00000437124 TRIM37O94972 964 aa22.1■■□□□ 1.13
DDR1-237ENST00000437124 WASLO00401 505 aaPredicted RBP22.08■■□□□ 1.13
DDR1-237ENST00000437124 HIRIP3Q9BW71 556 aaPredicted RBP22.08■■□□□ 1.13
DDR1-237ENST00000437124 KIAA0232Q92628 1395 aa22.08■■□□□ 1.12
DDR1-237ENST00000437124 APBA3O96018 575 aa22.07■■□□□ 1.12
DDR1-237ENST00000437124 NGDNQ8NEJ9 315 aaKnown RBP22.07■■□□□ 1.12
DDR1-237ENST00000437124 RREB1Q92766 1687 aa22.07■■□□□ 1.12
DDR1-237ENST00000437124 DCAF11Q8TEB1 546 aa22.06■■□□□ 1.12
DDR1-237ENST00000437124 KDM2AQ9Y2K7 1162 aa22.06■■□□□ 1.12
DDR1-237ENST00000437124 MINK1Q8N4C8 1332 aaPredicted RBP22.06■■□□□ 1.12
DDR1-237ENST00000437124 PAK3O75914 559 aaPredicted RBP22.05■■□□□ 1.12
DDR1-237ENST00000437124 YY1P25490 414 aa22.05■■□□□ 1.12
DDR1-237ENST00000437124 BARGINQ6ZT62 677 aa22.05■■□□□ 1.12
DDR1-237ENST00000437124 TRAK1Q9UPV9 953 aa22.05■■□□□ 1.12
DDR1-237ENST00000437124 STAC3Q96MF2 364 aa22.04■■□□□ 1.12
DDR1-237ENST00000437124 ATP7BP35670 1465 aa22.03■■□□□ 1.12
DDR1-237ENST00000437124 PHRF1Q9P1Y6 1649 aaKnown RBP22.02■■□□□ 1.12
DDR1-237ENST00000437124 NBPF8Q3BBV2 869 aa22.02■■□□□ 1.12
DDR1-237ENST00000437124 NBPF14Q5TI25 921 aa22.02■■□□□ 1.12
DDR1-237ENST00000437124 STRN4Q9NRL3 753 aa22.02■■□□□ 1.12
DDR1-237ENST00000437124 NUP188Q5SRE5 1749 aa22.02■■□□□ 1.12
DDR1-237ENST00000437124 CHRNA2Q15822 529 aa22.01■■□□□ 1.11
DDR1-237ENST00000437124 SSH2Q76I76 1423 aa22■■□□□ 1.11
DDR1-237ENST00000437124 PDE3BQ13370 1112 aa22■■□□□ 1.11
DDR1-237ENST00000437124 ITSN1Q15811 1721 aa22■■□□□ 1.11
DDR1-237ENST00000437124 ZC3H6P61129 1189 aaKnown RBP21.97■■□□□ 1.11
DDR1-237ENST00000437124 NUDT16Q96DE0 195 aaKnown RBP21.97■■□□□ 1.11
DDR1-237ENST00000437124 SPON1Q9HCB6 807 aa21.97■■□□□ 1.11
DDR1-237ENST00000437124 NINLQ9Y2I6 1382 aa21.97■■□□□ 1.11
DDR1-237ENST00000437124 USP35Q9P2H5 1018 aa21.96■■□□□ 1.11
DDR1-237ENST00000437124 POLR3AO14802 1390 aaPredicted RBP21.96■■□□□ 1.11
DDR1-237ENST00000437124 C11orf95C9JLR9 678 aaPredicted RBP21.95■■□□□ 1.1
DDR1-237ENST00000437124 EVA1CP58658 441 aa21.95■■□□□ 1.1
DDR1-237ENST00000437124 TCP11L2Q8N4U5 519 aa21.95■■□□□ 1.1
DDR1-237ENST00000437124 THRAP3Q9Y2W1 955 aaKnown RBP21.95■■□□□ 1.1
DDR1-237ENST00000437124 CPDO75976 1380 aa21.95■■□□□ 1.1
DDR1-237ENST00000437124 CAMTA1Q9Y6Y1 1673 aa21.95■■□□□ 1.1
DDR1-237ENST00000437124 KCNQ2O43526 872 aa21.94■■□□□ 1.1
DDR1-237ENST00000437124 LMO7Q8WWI1 1683 aa21.94■■□□□ 1.1
DDR1-237ENST00000437124 LARP1Q6PKG0 1096 aaKnown RBP21.93■■□□□ 1.1
DDR1-237ENST00000437124 NRKQ7Z2Y5 1582 aa21.93■■□□□ 1.1
DDR1-237ENST00000437124 PPP1R1BQ9UD71 204 aaPredicted RBP21.93■■□□□ 1.1
DDR1-237ENST00000437124 DCAF8L1A6NGE4 600 aa21.92■■□□□ 1.1
DDR1-237ENST00000437124 ARHGEF28Q8N1W1 1705 aaKnown RBP21.91■■□□□ 1.1
DDR1-237ENST00000437124 USP19O94966 1318 aa21.9■■□□□ 1.1
DDR1-237ENST00000437124 PARP4Q9UKK3 1724 aaKnown RBP21.9■■□□□ 1.1
DDR1-237ENST00000437124 TOPAZ1Q8N9V7 1692 aa21.89■■□□□ 1.1
DDR1-237ENST00000437124 NUTM2GQ5VZR2 741 aa21.89■■□□□ 1.09
DDR1-237ENST00000437124 CCDC61Q9Y6R9 512 aa21.89■■□□□ 1.09
DDR1-237ENST00000437124 RGPD3A6NKT7 1758 aaPredicted RBP21.89■■□□□ 1.09
DDR1-237ENST00000437124 RGPD4Q7Z3J3 1758 aa21.89■■□□□ 1.09
DDR1-237ENST00000437124 ACEP12821 1306 aa21.88■■□□□ 1.09
DDR1-237ENST00000437124 PLEKHG3A1L390 1219 aa21.88■■□□□ 1.09
DDR1-237ENST00000437124 PLSCR1O15162 318 aa21.87■■□□□ 1.09
DDR1-237ENST00000437124 CDK19Q9BWU1 502 aa21.87■■□□□ 1.09
DDR1-237ENST00000437124 OVOS2A0A0G2JMS6 1433 aa21.87■■□□□ 1.09
DDR1-237ENST00000437124 OVOS2A0A0J9YW53 1432 aa21.87■■□□□ 1.09
DDR1-237ENST00000437124 OVOS2Q6IE36 1432 aa21.87■■□□□ 1.09
DDR1-237ENST00000437124 COL5A2P05997 1499 aaPredicted RBP21.86■■□□□ 1.09
DDR1-237ENST00000437124 ABTB2Q8N961 1025 aa21.86■■□□□ 1.09
DDR1-237ENST00000437124 PEAK1Q9H792 1746 aa21.86■■□□□ 1.09
DDR1-237ENST00000437124 CRB1P82279 1406 aa21.84■■□□□ 1.09
DDR1-237ENST00000437124 KIAA1210Q9ULL0 1709 aa21.83■■□□□ 1.08
DDR1-237ENST00000437124 GCP02774 474 aa21.82■■□□□ 1.08
DDR1-237ENST00000437124 NLRP13Q86W25 1043 aa21.82■■□□□ 1.08
DDR1-237ENST00000437124 CASZ1Q86V15 1759 aa21.82■■□□□ 1.08
DDR1-237ENST00000437124 BRD4O60885 1362 aaPredicted RBP21.8■■□□□ 1.08
DDR1-237ENST00000437124 NBPF1Q3BBV0 1214 aa21.8■■□□□ 1.08
DDR1-237ENST00000437124 BCL11BQ9C0K0 894 aaPredicted RBP21.79■■□□□ 1.08
DDR1-237ENST00000437124 ANO8Q9HCE9 1232 aaPredicted RBP21.79■■□□□ 1.08
DDR1-237ENST00000437124 BCL9O00512 1426 aa21.79■■□□□ 1.08
DDR1-237ENST00000437124 UTRNP46939 3433 aa21.78■■□□□ 1.08
DDR1-237ENST00000437124 LRRC37A3O60309 1634 aa21.78■■□□□ 1.08
DDR1-237ENST00000437124 AATKQ6ZMQ8 1374 aa21.77■■□□□ 1.08
DDR1-237ENST00000437124 DDB1Q16531 1140 aa21.77■■□□□ 1.08
DDR1-237ENST00000437124 SBF2Q86WG5 1849 aa21.77■■□□□ 1.08
DDR1-237ENST00000437124 PTGER2P43116 358 aa21.75■■□□□ 1.07
DDR1-237ENST00000437124 PPIP5K1Q6PFW1 1433 aa21.74■■□□□ 1.07
DDR1-237ENST00000437124 PROM2Q8N271 834 aa21.74■■□□□ 1.07
DDR1-237ENST00000437124 ZNF784Q8NCA9 323 aaPredicted RBP21.73■■□□□ 1.07
DDR1-237ENST00000437124 CDCA7Q9BWT1 371 aaPredicted RBP21.73■■□□□ 1.07
DDR1-237ENST00000437124 PDGFDQ9GZP0 370 aaPredicted RBP21.73■■□□□ 1.07
DDR1-237ENST00000437124 SLIT3O75094 1523 aa21.73■■□□□ 1.07
DDR1-237ENST00000437124 PTF1AQ7RTS3 328 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms