RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 ZBTB24O43167 697 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-212ENST00000434424 TRIM32Q13049 653 aa12.4□□□□□ -0.42
PTPRK-212ENST00000434424 WWC1Q8IX03 1113 aa12.4□□□□□ -0.42
PTPRK-212ENST00000434424 DXOO77932 396 aaKnown RBP12.39□□□□□ -0.43
PTPRK-212ENST00000434424 PPP2R2DQ66LE6 453 aa12.39□□□□□ -0.43
PTPRK-212ENST00000434424 AEBP1Q8IUX7 1158 aa12.39□□□□□ -0.43
PTPRK-212ENST00000434424 USB1Q9BQ65 265 aaKnown RBP12.39□□□□□ -0.43
PTPRK-212ENST00000434424 WNT7AO00755 349 aa12.38□□□□□ -0.43
PTPRK-212ENST00000434424 AXIN1O15169 862 aa12.37□□□□□ -0.43
PTPRK-212ENST00000434424 SMCPP49901 116 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-212ENST00000434424 GMPR2Q9P2T1 348 aaKnown RBP12.37□□□□□ -0.43
PTPRK-212ENST00000434424 LIMD1Q9UGP4 676 aa12.37□□□□□ -0.43
PTPRK-212ENST00000434424 TTC24A2A3L6 582 aaPredicted RBP12.36□□□□□ -0.43
PTPRK-212ENST00000434424 SMPD1P17405 629 aa12.36□□□□□ -0.43
PTPRK-212ENST00000434424 CTC1Q2NKJ3 1217 aa12.36□□□□□ -0.43
PTPRK-212ENST00000434424 TREML4Q6UXN2 200 aa12.36□□□□□ -0.43
PTPRK-212ENST00000434424 RIC3Q7Z5B4 369 aa12.36□□□□□ -0.43
PTPRK-212ENST00000434424 HOXA2O43364 376 aa12.35□□□□□ -0.43
PTPRK-212ENST00000434424 GUCA2AQ02747 115 aa12.35□□□□□ -0.43
PTPRK-212ENST00000434424 RETREG2Q8NC44 543 aa12.35□□□□□ -0.43
PTPRK-212ENST00000434424 MRGPRX2Q96LB1 330 aa12.35□□□□□ -0.43
PTPRK-212ENST00000434424 PRM3Q9NNZ6 103 aa12.35□□□□□ -0.43
PTPRK-212ENST00000434424 FBXO31Q5XUX0 539 aaPredicted RBP12.34□□□□□ -0.43
PTPRK-212ENST00000434424 GDPD2Q9HCC8 539 aa12.34□□□□□ -0.43
PTPRK-212ENST00000434424 USP46P62068 366 aa12.33□□□□□ -0.44
PTPRK-212ENST00000434424 TUSC1Q2TAM9 212 aa12.33□□□□□ -0.44
PTPRK-212ENST00000434424 SNIP1Q8TAD8 396 aaKnown RBP12.33□□□□□ -0.44
PTPRK-212ENST00000434424 SPIRE2Q8WWL2 714 aa12.33□□□□□ -0.44
PTPRK-212ENST00000434424 J3QL48 77 aa12.32□□□□□ -0.44
PTPRK-212ENST00000434424 PPP1R15AO75807 674 aaPredicted RBP12.32□□□□□ -0.44
PTPRK-212ENST00000434424 MTMR14Q8NCE2 650 aa12.32□□□□□ -0.44
PTPRK-212ENST00000434424 SYMPKQ92797 1274 aaKnown RBP12.31□□□□□ -0.44
PTPRK-212ENST00000434424 CALR3Q96L12 384 aaKnown RBP12.31□□□□□ -0.44
PTPRK-212ENST00000434424 SPTLC1O15269 473 aa12.3□□□□□ -0.44
PTPRK-212ENST00000434424 SKOR1P84550 965 aa12.3□□□□□ -0.44
PTPRK-212ENST00000434424 ACIN1Q9UKV3 1341 aaKnown RBP12.3□□□□□ -0.44
PTPRK-212ENST00000434424 C11orf95C9JLR9 678 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-212ENST00000434424 SOCS7O14512 581 aa12.29□□□□□ -0.44
PTPRK-212ENST00000434424 ABL2P42684 1182 aa12.29□□□□□ -0.44
PTPRK-212ENST00000434424 NUTM1Q86Y26 1132 aa12.29□□□□□ -0.44
PTPRK-212ENST00000434424 PDE4CQ08493 712 aa12.28□□□□□ -0.44
PTPRK-212ENST00000434424 CCDC24Q8N4L8 307 aa12.28□□□□□ -0.44
PTPRK-212ENST00000434424 ABCC9O60706 1549 aa12.27□□□□□ -0.44
PTPRK-212ENST00000434424 RSBN1LQ6PCB5 846 aaPredicted RBP12.27□□□□□ -0.45
PTPRK-212ENST00000434424 CSPP1Q1MSJ5 1256 aa12.26□□□□□ -0.45
PTPRK-212ENST00000434424 RC3H1Q5TC82 1133 aaKnown RBP12.26□□□□□ -0.45
PTPRK-212ENST00000434424 HPS1Q92902 700 aa12.26□□□□□ -0.45
PTPRK-212ENST00000434424 JUNDP17535 347 aa12.25□□□□□ -0.45
PTPRK-212ENST00000434424 GLMNQ92990 594 aa12.25□□□□□ -0.45
PTPRK-212ENST00000434424 ATP13A2Q9NQ11 1180 aa12.25□□□□□ -0.45
PTPRK-212ENST00000434424 AP1G2O75843 785 aa12.24□□□□□ -0.45
PTPRK-212ENST00000434424 IRF5Q13568 498 aa12.24□□□□□ -0.45
PTPRK-212ENST00000434424 TMCO4Q5TGY1 634 aa12.24□□□□□ -0.45
PTPRK-212ENST00000434424 PTCRAQ6ISU1 281 aaPredicted RBP12.23□□□□□ -0.45
PTPRK-212ENST00000434424 PCDHGC3Q9UN70 934 aa12.23□□□□□ -0.45
PTPRK-212ENST00000434424 TBC1D2BQ9UPU7 963 aa12.23□□□□□ -0.45
PTPRK-212ENST00000434424 MOXD2PA6NHM9 499 aa12.22□□□□□ -0.45
PTPRK-212ENST00000434424 SNRPBP14678 240 aaKnown RBP12.22□□□□□ -0.45
PTPRK-212ENST00000434424 GJA5P36382 358 aa12.22□□□□□ -0.45
PTPRK-212ENST00000434424 WNT7BP56706 349 aa12.22□□□□□ -0.45
PTPRK-212ENST00000434424 NFX1Q12986 1120 aaKnown RBP12.22□□□□□ -0.45
PTPRK-212ENST00000434424 POM121CA8CG34 1229 aa12.21□□□□□ -0.45
PTPRK-212ENST00000434424 LILRB3O75022 631 aa12.21□□□□□ -0.45
PTPRK-212ENST00000434424 WFS1O76024 890 aa12.21□□□□□ -0.45
PTPRK-212ENST00000434424 GZF1Q9H116 711 aaPredicted RBP12.21□□□□□ -0.45
PTPRK-212ENST00000434424 QPCTQ16769 361 aa12.2□□□□□ -0.46
PTPRK-212ENST00000434424 LCE2CQ5TA81 110 aa12.2□□□□□ -0.46
PTPRK-212ENST00000434424 RETREG3Q86VR2 466 aa12.2□□□□□ -0.46
PTPRK-212ENST00000434424 NUTM2BA6NNL0 878 aaPredicted RBP12.19□□□□□ -0.46
PTPRK-212ENST00000434424 NUTM2EB1AL46 878 aaPredicted RBP12.19□□□□□ -0.46
PTPRK-212ENST00000434424 NUTM2DQ5VT03 806 aaPredicted RBP12.19□□□□□ -0.46
PTPRK-212ENST00000434424 NUTM2AQ8IVF1 878 aaPredicted RBP12.19□□□□□ -0.46
PTPRK-212ENST00000434424 NDUFV2P19404 249 aa12.18□□□□□ -0.46
PTPRK-212ENST00000434424 NUDT12Q9BQG2 462 aa12.18□□□□□ -0.46
PTPRK-212ENST00000434424 SIAH2O43255 324 aa12.17□□□□□ -0.46
PTPRK-212ENST00000434424 USP17L8P0C7I0 530 aa12.17□□□□□ -0.46
PTPRK-212ENST00000434424 FDX1P10109 184 aa12.17□□□□□ -0.46
PTPRK-212ENST00000434424 RTL5Q5HYW3 569 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-212ENST00000434424 TRIM47Q96LD4 638 aa12.17□□□□□ -0.46
PTPRK-212ENST00000434424 PCDHB15Q9Y5E8 787 aa12.17□□□□□ -0.46
PTPRK-212ENST00000434424 PATL2C9JE40 543 aaKnown RBP12.16□□□□□ -0.46
PTPRK-212ENST00000434424 PRPF38BQ5VTL8 546 aaKnown RBP12.15□□□□□ -0.46
PTPRK-212ENST00000434424 RGS22Q8NE09 1264 aa12.15□□□□□ -0.46
PTPRK-212ENST00000434424 PBXIP1Q96AQ6 731 aa12.15□□□□□ -0.46
PTPRK-212ENST00000434424 NDUFB9Q9Y6M9 179 aa12.15□□□□□ -0.46
PTPRK-212ENST00000434424 ALDH1A1P00352 501 aa12.14□□□□□ -0.47
PTPRK-212ENST00000434424 MFAP1P55081 439 aaKnown RBP12.14□□□□□ -0.47
PTPRK-212ENST00000434424 C6orf229H3BNL8 230 aa12.13□□□□□ -0.47
PTPRK-212ENST00000434424 HDGFL1Q5TGJ6 251 aa12.13□□□□□ -0.47
PTPRK-212ENST00000434424 CABLES1Q8TDN4 633 aa12.13□□□□□ -0.47
PTPRK-212ENST00000434424 WASHC4Q2M389 1173 aa12.12□□□□□ -0.47
PTPRK-212ENST00000434424 ZBTB3Q9H5J0 574 aa12.12□□□□□ -0.47
PTPRK-212ENST00000434424 SENP2Q9HC62 589 aa12.12□□□□□ -0.47
PTPRK-212ENST00000434424 SH3BP2P78314 561 aa12.11□□□□□ -0.47
PTPRK-212ENST00000434424 MTMR7Q9Y216 660 aa12.11□□□□□ -0.47
PTPRK-212ENST00000434424 WIPF1O43516 503 aa12.1□□□□□ -0.47
PTPRK-212ENST00000434424 CCNYL3P0C7X3 344 aa12.1□□□□□ -0.47
PTPRK-212ENST00000434424 GJD4Q96KN9 370 aaPredicted RBP12.1□□□□□ -0.47
PTPRK-212ENST00000434424 TERTO14746 1132 aaKnown RBP12.09□□□□□ -0.47
PTPRK-212ENST00000434424 CSB-PGBD3P0DP91 1061 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms