RNA–Protein interactions for RNA: ENST00000433179.3

PERM1-202, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PERM1, Length 3,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-202ENST00000433179 TMEM2Q9UHN6 1383 aa16.98■□□□□ 0.31
PERM1-202ENST00000433179 PLEKHG1Q9ULL1 1385 aa16.97■□□□□ 0.31
PERM1-202ENST00000433179 ITSN1Q15811 1721 aa16.97■□□□□ 0.31
PERM1-202ENST00000433179 ATP7BP35670 1465 aa16.97■□□□□ 0.31
PERM1-202ENST00000433179 STK26Q9P289 416 aa16.97■□□□□ 0.31
PERM1-202ENST00000433179 RRP7AQ9Y3A4 280 aaKnown RBP16.97■□□□□ 0.31
PERM1-202ENST00000433179 NSD2O96028 1365 aa16.97■□□□□ 0.31
PERM1-202ENST00000433179 ANKRD36BQ8N2N9 1353 aa16.96■□□□□ 0.31
PERM1-202ENST00000433179 COL3A1P02461 1466 aaPredicted RBP16.94■□□□□ 0.3
PERM1-202ENST00000433179 CHD2O14647 1828 aaKnown RBP16.94■□□□□ 0.3
PERM1-202ENST00000433179 HSP90AA1P07900 732 aaKnown RBP16.94■□□□□ 0.3
PERM1-202ENST00000433179 DDRGK1Q96HY6 314 aa16.94■□□□□ 0.3
PERM1-202ENST00000433179 ESF1Q9H501 851 aaKnown RBP16.94■□□□□ 0.3
PERM1-202ENST00000433179 LRRC7Q96NW7 1537 aa16.93■□□□□ 0.3
PERM1-202ENST00000433179 PTCH1Q13635 1447 aa16.93■□□□□ 0.3
PERM1-202ENST00000433179 IQSEC2Q5JU85 1478 aa16.93■□□□□ 0.3
PERM1-202ENST00000433179 MARF1Q9Y4F3 1742 aaKnown RBP16.92■□□□□ 0.3
PERM1-202ENST00000433179 FRAT2O75474 233 aaPredicted RBP16.92■□□□□ 0.3
PERM1-202ENST00000433179 RGS3P49796 1198 aa16.92■□□□□ 0.3
PERM1-202ENST00000433179 MS4A1P11836 297 aa16.91■□□□□ 0.3
PERM1-202ENST00000433179 POLR3AO14802 1390 aaPredicted RBP16.91■□□□□ 0.3
PERM1-202ENST00000433179 BCAR3O75815 825 aa16.9■□□□□ 0.3
PERM1-202ENST00000433179 RRAGDQ9NQL2 400 aaPredicted RBP16.9■□□□□ 0.3
PERM1-202ENST00000433179 CPSF1Q10570 1443 aaKnown RBP16.9■□□□□ 0.3
PERM1-202ENST00000433179 DUSP27Q5VZP5 1158 aa16.9■□□□□ 0.3
PERM1-202ENST00000433179 NWD1Q149M9 1564 aa16.9■□□□□ 0.3
PERM1-202ENST00000433179 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.89■□□□□ 0.29
PERM1-202ENST00000433179 CABP2Q9NPB3 220 aa16.89■□□□□ 0.29
PERM1-202ENST00000433179 FMN2Q9NZ56 1722 aa16.88■□□□□ 0.29
PERM1-202ENST00000433179 ATAD2Q6PL18 1390 aa16.88■□□□□ 0.29
PERM1-202ENST00000433179 CEBPAP49715 358 aaPredicted RBP16.88■□□□□ 0.29
PERM1-202ENST00000433179 PDE3BQ13370 1112 aa16.88■□□□□ 0.29
PERM1-202ENST00000433179 METP08581 1390 aa16.88■□□□□ 0.29
PERM1-202ENST00000433179 PNNQ9H307 717 aaKnown RBP16.87■□□□□ 0.29
PERM1-202ENST00000433179 GOLGA2Q08379 1002 aa16.86■□□□□ 0.29
PERM1-202ENST00000433179 NSD3Q9BZ95 1437 aa16.86■□□□□ 0.29
PERM1-202ENST00000433179 PTPRUQ92729 1446 aa16.85■□□□□ 0.29
PERM1-202ENST00000433179 EVC2Q86UK5 1308 aa16.85■□□□□ 0.29
PERM1-202ENST00000433179 ZNF521Q96K83 1311 aa16.85■□□□□ 0.29
PERM1-202ENST00000433179 BCL2L13Q9BXK5 485 aa16.85■□□□□ 0.29
PERM1-202ENST00000433179 MORC1Q86VD1 984 aa16.84■□□□□ 0.29
PERM1-202ENST00000433179 FBLN1P23142 703 aa16.83■□□□□ 0.28
PERM1-202ENST00000433179 NCBP3Q53F19 620 aaKnown RBP16.83■□□□□ 0.28
PERM1-202ENST00000433179 A0A1W2PP64 1363 aa16.83■□□□□ 0.28
PERM1-202ENST00000433179 RGPD1P0DJD0 1748 aa16.82■□□□□ 0.28
PERM1-202ENST00000433179 PIK3R4Q99570 1358 aa16.82■□□□□ 0.28
PERM1-202ENST00000433179 RRP9O43818 475 aaKnown RBP16.81■□□□□ 0.28
PERM1-202ENST00000433179 DNAJC5Q9H3Z4 198 aa16.81■□□□□ 0.28
PERM1-202ENST00000433179 TNNQ9UQP3 1299 aa16.81■□□□□ 0.28
PERM1-202ENST00000433179 MTHFSP49914 203 aa16.8■□□□□ 0.28
PERM1-202ENST00000433179 SLFN5Q08AF3 891 aa16.8■□□□□ 0.28
PERM1-202ENST00000433179 MINK1Q8N4C8 1332 aaPredicted RBP16.8■□□□□ 0.28
PERM1-202ENST00000433179 PNPLA6Q8IY17 1366 aa16.8■□□□□ 0.28
PERM1-202ENST00000433179 RBM10P98175 930 aaKnown RBP16.79■□□□□ 0.28
PERM1-202ENST00000433179 SSH2Q76I76 1423 aa16.79■□□□□ 0.28
PERM1-202ENST00000433179 SETD1BQ9UPS6 1966 aaKnown RBP16.79■□□□□ 0.28
PERM1-202ENST00000433179 GGNBP2Q9H3C7 697 aa16.78■□□□□ 0.28
PERM1-202ENST00000433179 SRPK2P78362 688 aaKnown RBP16.77■□□□□ 0.28
PERM1-202ENST00000433179 PANK1Q8TE04 598 aa16.77■□□□□ 0.28
PERM1-202ENST00000433179 POGKQ9P215 609 aa16.77■□□□□ 0.28
PERM1-202ENST00000433179 RGPD8O14715 1765 aaPredicted RBP16.77■□□□□ 0.28
PERM1-202ENST00000433179 PHRF1Q9P1Y6 1649 aaKnown RBP16.77■□□□□ 0.28
PERM1-202ENST00000433179 MAP2P11137 1827 aaKnown RBP16.76■□□□□ 0.27
PERM1-202ENST00000433179 ROBO2Q9HCK4 1378 aa16.75■□□□□ 0.27
PERM1-202ENST00000433179 FAM161AQ3B820 660 aa16.75■□□□□ 0.27
PERM1-202ENST00000433179 CLUAP1Q96AJ1 413 aa16.75■□□□□ 0.27
PERM1-202ENST00000433179 NKTRP30414 1462 aaKnown RBP16.75■□□□□ 0.27
PERM1-202ENST00000433179 EDC4Q6P2E9 1401 aaKnown RBP16.74■□□□□ 0.27
PERM1-202ENST00000433179 SLKQ9H2G2 1235 aaPredicted RBP16.74■□□□□ 0.27
PERM1-202ENST00000433179 COG6Q9Y2V7 657 aa16.74■□□□□ 0.27
PERM1-202ENST00000433179 CGNL1Q0VF96 1302 aa16.74■□□□□ 0.27
PERM1-202ENST00000433179 WWC1Q8IX03 1113 aa16.73■□□□□ 0.27
PERM1-202ENST00000433179 TCP11L2Q8N4U5 519 aa16.73■□□□□ 0.27
PERM1-202ENST00000433179 PRAM1Q96QH2 718 aa16.73■□□□□ 0.27
PERM1-202ENST00000433179 TRMT2AQ8IZ69 625 aaKnown RBP16.73■□□□□ 0.27
PERM1-202ENST00000433179 PHF23Q9BUL5 403 aaPredicted RBP16.73■□□□□ 0.27
PERM1-202ENST00000433179 HDGFP51858 240 aaKnown RBP16.73■□□□□ 0.27
PERM1-202ENST00000433179 U2SURPO15042 1029 aaKnown RBP16.72■□□□□ 0.27
PERM1-202ENST00000433179 U2AF1L5P0DN76 240 aaPredicted RBP16.72■□□□□ 0.27
PERM1-202ENST00000433179 LTKP29376 864 aa16.72■□□□□ 0.27
PERM1-202ENST00000433179 U2AF1Q01081 240 aaKnown RBP eCLIP16.72■□□□□ 0.27
PERM1-202ENST00000433179 CENPQQ7L2Z9 268 aaPredicted RBP16.72■□□□□ 0.27
PERM1-202ENST00000433179 PIK3C2AO00443 1686 aa16.72■□□□□ 0.27
PERM1-202ENST00000433179 NUTM2FA1L443 756 aa16.72■□□□□ 0.27
PERM1-202ENST00000433179 CANXP27824 592 aaKnown RBP16.72■□□□□ 0.27
PERM1-202ENST00000433179 ANKARQ7Z5J8 1434 aa16.71■□□□□ 0.26
PERM1-202ENST00000433179 PEAK1Q9H792 1746 aa16.7■□□□□ 0.26
PERM1-202ENST00000433179 AATKQ6ZMQ8 1374 aa16.7■□□□□ 0.26
PERM1-202ENST00000433179 IGHDP01880 384 aa16.7■□□□□ 0.26
PERM1-202ENST00000433179 NGEFQ8N5V2 710 aa16.7■□□□□ 0.26
PERM1-202ENST00000433179 TBX22Q9Y458 520 aa16.7■□□□□ 0.26
PERM1-202ENST00000433179 CDK12Q9NYV4 1490 aaPredicted RBP16.7■□□□□ 0.26
PERM1-202ENST00000433179 C8orf34Q49A92 452 aa16.69■□□□□ 0.26
PERM1-202ENST00000433179 WAPLQ7Z5K2 1190 aa16.69■□□□□ 0.26
PERM1-202ENST00000433179 TSR2Q969E8 191 aaKnown RBP16.69■□□□□ 0.26
PERM1-202ENST00000433179 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.69■□□□□ 0.26
PERM1-202ENST00000433179 L1TD1Q5T7N2 865 aaKnown RBP16.68■□□□□ 0.26
PERM1-202ENST00000433179 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.68■□□□□ 0.26
PERM1-202ENST00000433179 OVOS2A0A0J9YW53 1432 aa16.67■□□□□ 0.26
PERM1-202ENST00000433179 OVOS2Q6IE36 1432 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms