RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 YTHDC2Q9H6S0 1430 aaKnown RBP23.79■■□□□ 1.4
NUP50-209ENST00000432340 ANKARQ7Z5J8 1434 aa23.78■■□□□ 1.4
NUP50-209ENST00000432340 THSD7AQ9UPZ6 1657 aa23.78■■□□□ 1.4
NUP50-209ENST00000432340 NRAPQ86VF7 1730 aa23.78■■□□□ 1.4
NUP50-209ENST00000432340 PMFBP1Q8TBY8 1022 aa23.76■■□□□ 1.39
NUP50-209ENST00000432340 SLC4A1APQ9BWU0 796 aaKnown RBP23.76■■□□□ 1.39
NUP50-209ENST00000432340 BARGINQ6ZT62 677 aa23.75■■□□□ 1.39
NUP50-209ENST00000432340 EIF3AQ14152 1382 aaKnown RBP23.75■■□□□ 1.39
NUP50-209ENST00000432340 ABCA3Q99758 1704 aa23.73■■□□□ 1.39
NUP50-209ENST00000432340 PPLO60437 1756 aa23.73■■□□□ 1.39
NUP50-209ENST00000432340 EVA1CP58658 441 aa23.72■■□□□ 1.39
NUP50-209ENST00000432340 RGL3Q3MIN7 710 aa23.72■■□□□ 1.39
NUP50-209ENST00000432340 STRN4Q9NRL3 753 aa23.72■■□□□ 1.39
NUP50-209ENST00000432340 DHX57Q6P158 1386 aaKnown RBP23.72■■□□□ 1.39
NUP50-209ENST00000432340 KNDC1Q76NI1 1749 aa23.71■■□□□ 1.39
NUP50-209ENST00000432340 POGKQ9P215 609 aa23.7■■□□□ 1.38
NUP50-209ENST00000432340 PIK3C2GO75747 1445 aa23.69■■□□□ 1.38
NUP50-209ENST00000432340 ACIN1Q9UKV3 1341 aaKnown RBP23.69■■□□□ 1.38
NUP50-209ENST00000432340 USP35Q9P2H5 1018 aa23.69■■□□□ 1.38
NUP50-209ENST00000432340 PAK3O75914 559 aaPredicted RBP23.68■■□□□ 1.38
NUP50-209ENST00000432340 PRAM1Q96QH2 718 aa23.68■■□□□ 1.38
NUP50-209ENST00000432340 TCP11L2Q8N4U5 519 aa23.67■■□□□ 1.38
NUP50-209ENST00000432340 NGDNQ8NEJ9 315 aaKnown RBP23.67■■□□□ 1.38
NUP50-209ENST00000432340 C14orf93Q9H972 538 aaKnown RBP23.66■■□□□ 1.38
NUP50-209ENST00000432340 THRAP3Q9Y2W1 955 aaKnown RBP23.66■■□□□ 1.38
NUP50-209ENST00000432340 RREB1Q92766 1687 aa23.66■■□□□ 1.38
NUP50-209ENST00000432340 KIAA0232Q92628 1395 aa23.65■■□□□ 1.38
NUP50-209ENST00000432340 PLSCR1O15162 318 aa23.65■■□□□ 1.38
NUP50-209ENST00000432340 SAFB2Q14151 953 aaKnown RBP eCLIP23.65■■□□□ 1.38
NUP50-209ENST00000432340 NUP188Q5SRE5 1749 aa23.62■■□□□ 1.37
NUP50-209ENST00000432340 CHRNA2Q15822 529 aa23.62■■□□□ 1.37
NUP50-209ENST00000432340 GIGYF1O75420 1035 aaPredicted RBP23.61■■□□□ 1.37
NUP50-209ENST00000432340 SPATA31E1Q6ZUB1 1445 aa23.6■■□□□ 1.37
NUP50-209ENST00000432340 IFT172Q9UG01 1749 aa23.6■■□□□ 1.37
NUP50-209ENST00000432340 SYT17Q9BSW7 474 aa23.6■■□□□ 1.37
NUP50-209ENST00000432340 BCL11BQ9C0K0 894 aaPredicted RBP23.6■■□□□ 1.37
NUP50-209ENST00000432340 SSH2Q76I76 1423 aa23.59■■□□□ 1.37
NUP50-209ENST00000432340 ZBTB7AO95365 584 aa23.58■■□□□ 1.37
NUP50-209ENST00000432340 ZC3H6P61129 1189 aaKnown RBP23.57■■□□□ 1.36
NUP50-209ENST00000432340 FHDC1Q9C0D6 1143 aaPredicted RBP23.57■■□□□ 1.36
NUP50-209ENST00000432340 PTGER2P43116 358 aa23.56■■□□□ 1.36
NUP50-209ENST00000432340 OVOS2A0A0G2JMS6 1433 aa23.56■■□□□ 1.36
NUP50-209ENST00000432340 OVOS2A0A0J9YW53 1432 aa23.56■■□□□ 1.36
NUP50-209ENST00000432340 OVOS2Q6IE36 1432 aa23.56■■□□□ 1.36
NUP50-209ENST00000432340 ALS2Q96Q42 1657 aa23.55■■□□□ 1.36
NUP50-209ENST00000432340 STK32BQ9NY57 414 aa23.55■■□□□ 1.36
NUP50-209ENST00000432340 TRPM3Q9HCF6 1732 aaPredicted RBP23.55■■□□□ 1.36
NUP50-209ENST00000432340 NRKQ7Z2Y5 1582 aa23.54■■□□□ 1.36
NUP50-209ENST00000432340 LARP1Q6PKG0 1096 aaKnown RBP23.54■■□□□ 1.36
NUP50-209ENST00000432340 MTFR1LQ9H019 292 aa23.54■■□□□ 1.36
NUP50-209ENST00000432340 CFAP70Q5T0N1 1121 aa23.53■■□□□ 1.36
NUP50-209ENST00000432340 ANO8Q9HCE9 1232 aaPredicted RBP23.53■■□□□ 1.36
NUP50-209ENST00000432340 ATF5Q9Y2D1 282 aaPredicted RBP23.53■■□□□ 1.36
NUP50-209ENST00000432340 CAMTA1Q9Y6Y1 1673 aa23.53■■□□□ 1.36
NUP50-209ENST00000432340 DLC1Q96QB1 1528 aa23.53■■□□□ 1.36
NUP50-209ENST00000432340 WASLO00401 505 aaPredicted RBP23.52■■□□□ 1.36
NUP50-209ENST00000432340 ATP7BP35670 1465 aa23.51■■□□□ 1.35
NUP50-209ENST00000432340 RGPD8O14715 1765 aaPredicted RBP23.51■■□□□ 1.35
NUP50-209ENST00000432340 HIRIP3Q9BW71 556 aaPredicted RBP23.51■■□□□ 1.35
NUP50-209ENST00000432340 TULP4Q9NRJ4 1543 aa23.49■■□□□ 1.35
NUP50-209ENST00000432340 PRR36Q9H6K5 1346 aa23.49■■□□□ 1.35
NUP50-209ENST00000432340 CPDO75976 1380 aa23.48■■□□□ 1.35
NUP50-209ENST00000432340 DDB1Q16531 1140 aa23.47■■□□□ 1.35
NUP50-209ENST00000432340 GPR162Q16538 588 aa23.47■■□□□ 1.35
NUP50-209ENST00000432340 MINK1Q8N4C8 1332 aaPredicted RBP23.47■■□□□ 1.35
NUP50-209ENST00000432340 ARXQ96QS3 562 aa23.46■■□□□ 1.35
NUP50-209ENST00000432340 MAP3K5Q99683 1374 aa23.46■■□□□ 1.35
NUP50-209ENST00000432340 SLC15A2Q16348 729 aa23.45■■□□□ 1.34
NUP50-209ENST00000432340 PDGFDQ9GZP0 370 aaPredicted RBP23.44■■□□□ 1.34
NUP50-209ENST00000432340 RGPD3A6NKT7 1758 aaPredicted RBP23.44■■□□□ 1.34
NUP50-209ENST00000432340 RGPD4Q7Z3J3 1758 aa23.44■■□□□ 1.34
NUP50-209ENST00000432340 CDCA7Q9BWT1 371 aaPredicted RBP23.43■■□□□ 1.34
NUP50-209ENST00000432340 TRAK1Q9UPV9 953 aa23.43■■□□□ 1.34
NUP50-209ENST00000432340 NUTM2GQ5VZR2 741 aa23.42■■□□□ 1.34
NUP50-209ENST00000432340 CASZ1Q86V15 1759 aa23.42■■□□□ 1.34
NUP50-209ENST00000432340 TXNRD1Q16881 649 aa23.41■■□□□ 1.34
NUP50-209ENST00000432340 ABTB2Q8N961 1025 aa23.41■■□□□ 1.34
NUP50-209ENST00000432340 CRYBG1Q9Y4K1 1723 aa23.41■■□□□ 1.34
NUP50-209ENST00000432340 CRB1P82279 1406 aa23.41■■□□□ 1.34
NUP50-209ENST00000432340 PROM2Q8N271 834 aa23.4■■□□□ 1.34
NUP50-209ENST00000432340 NUDT16Q96DE0 195 aaKnown RBP23.4■■□□□ 1.34
NUP50-209ENST00000432340 SGIP1Q9BQI5 828 aa23.4■■□□□ 1.34
NUP50-209ENST00000432340 MYOM1P52179 1685 aa23.4■■□□□ 1.34
NUP50-209ENST00000432340 BCL9O00512 1426 aa23.4■■□□□ 1.34
NUP50-209ENST00000432340 NLRP13Q86W25 1043 aa23.39■■□□□ 1.33
NUP50-209ENST00000432340 MPHOSPH9Q99550 1183 aa23.38■■□□□ 1.33
NUP50-209ENST00000432340 GCP02774 474 aa23.35■■□□□ 1.33
NUP50-209ENST00000432340 PARP4Q9UKK3 1724 aaKnown RBP23.35■■□□□ 1.33
NUP50-209ENST00000432340 AATKQ6ZMQ8 1374 aa23.35■■□□□ 1.33
NUP50-209ENST00000432340 COL5A2P05997 1499 aaPredicted RBP23.35■■□□□ 1.33
NUP50-209ENST00000432340 USP19O94966 1318 aa23.34■■□□□ 1.33
NUP50-209ENST00000432340 UTRNP46939 3433 aa23.34■■□□□ 1.33
NUP50-209ENST00000432340 CHD4Q14839 1912 aa23.34■■□□□ 1.33
NUP50-209ENST00000432340 TOM1L2Q6ZVM7 507 aa23.34■■□□□ 1.33
NUP50-209ENST00000432340 PHRF1Q9P1Y6 1649 aaKnown RBP23.33■■□□□ 1.33
NUP50-209ENST00000432340 POLR3AO14802 1390 aaPredicted RBP23.33■■□□□ 1.33
NUP50-209ENST00000432340 CCDC61Q9Y6R9 512 aa23.33■■□□□ 1.33
NUP50-209ENST00000432340 POLD1P28340 1107 aa23.32■■□□□ 1.32
NUP50-209ENST00000432340 ACEP12821 1306 aa23.32■■□□□ 1.32
NUP50-209ENST00000432340 GRIN3BO60391 1043 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms