RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 SYCP1Q15431 976 aa9.01□□□□□ -0.97
SYNPO2-202ENST00000429713 RASSF4Q9H2L5 321 aa9.01□□□□□ -0.97
SYNPO2-202ENST00000429713 RRP7AQ9Y3A4 280 aaKnown RBP9.01□□□□□ -0.97
SYNPO2-202ENST00000429713 HDGFL2Q7Z4V5 671 aaPredicted RBP9.01□□□□□ -0.97
SYNPO2-202ENST00000429713 OSCARQ8IYS5 282 aa9.01□□□□□ -0.97
SYNPO2-202ENST00000429713 GOLGA6L10A0A0M3HER8 536 aa9□□□□□ -0.97
SYNPO2-202ENST00000429713 RTF1Q92541 710 aaKnown RBP9□□□□□ -0.97
SYNPO2-202ENST00000429713 CAMSAP2Q08AD1 1489 aa9□□□□□ -0.97
SYNPO2-202ENST00000429713 DNAJC5BQ9UF47 199 aa9□□□□□ -0.97
SYNPO2-202ENST00000429713 ANKRD18BA2A2Z9 1011 aa9□□□□□ -0.97
SYNPO2-202ENST00000429713 GOLGA6L9A6NEM1 432 aa9□□□□□ -0.97
SYNPO2-202ENST00000429713 GOLGA6L19H0YKK7 550 aa9□□□□□ -0.97
SYNPO2-202ENST00000429713 DNAAF4Q8WXU2 420 aa9□□□□□ -0.97
SYNPO2-202ENST00000429713 TRIM6-TRIM34B2RNG4 842 aa9□□□□□ -0.97
SYNPO2-202ENST00000429713 H0YHG0 523 aa9□□□□□ -0.97
SYNPO2-202ENST00000429713 MICALCLQ6ZW33 695 aa9□□□□□ -0.97
SYNPO2-202ENST00000429713 FILIP1Q7Z7B0 1213 aa9□□□□□ -0.97
SYNPO2-202ENST00000429713 MIPOL1Q8TD10 442 aa9□□□□□ -0.97
SYNPO2-202ENST00000429713 AQRO60306 1485 aaKnown RBP eCLIP8.99□□□□□ -0.97
SYNPO2-202ENST00000429713 ABCA5Q8WWZ7 1642 aa8.99□□□□□ -0.97
SYNPO2-202ENST00000429713 FRAT2O75474 233 aaPredicted RBP8.99□□□□□ -0.97
SYNPO2-202ENST00000429713 SF3B2Q13435 895 aaKnown RBP8.99□□□□□ -0.97
SYNPO2-202ENST00000429713 ANKRD45Q5TZF3 282 aa8.99□□□□□ -0.97
SYNPO2-202ENST00000429713 PRPF40AO75400 957 aaKnown RBP8.99□□□□□ -0.97
SYNPO2-202ENST00000429713 ZKSCAN2Q63HK3 967 aa8.99□□□□□ -0.97
SYNPO2-202ENST00000429713 MYO6Q9UM54 1294 aa8.99□□□□□ -0.97
SYNPO2-202ENST00000429713 NAIPQ13075 1403 aa8.99□□□□□ -0.97
SYNPO2-202ENST00000429713 ARHGAP5Q13017 1502 aa8.99□□□□□ -0.97
SYNPO2-202ENST00000429713 STK26Q9P289 416 aa8.99□□□□□ -0.97
SYNPO2-202ENST00000429713 GTF2A1P52655 376 aaPredicted RBP8.99□□□□□ -0.97
SYNPO2-202ENST00000429713 THOC2Q8NI27 1593 aaKnown RBP8.99□□□□□ -0.97
SYNPO2-202ENST00000429713 MKRN1Q9UHC7 482 aaKnown RBP8.99□□□□□ -0.97
SYNPO2-202ENST00000429713 ANKRD50Q9ULJ7 1429 aa8.98□□□□□ -0.97
SYNPO2-202ENST00000429713 MAP9Q49MG5 647 aa8.98□□□□□ -0.97
SYNPO2-202ENST00000429713 KLHL40Q2TBA0 621 aa8.98□□□□□ -0.97
SYNPO2-202ENST00000429713 KIAA1107Q9UPP5 1409 aa8.98□□□□□ -0.97
SYNPO2-202ENST00000429713 CCDC50Q8IVM0 306 aa8.98□□□□□ -0.97
SYNPO2-202ENST00000429713 NOL7Q9UMY1 257 aaKnown RBP8.98□□□□□ -0.97
SYNPO2-202ENST00000429713 APAF1O14727 1248 aa8.98□□□□□ -0.97
SYNPO2-202ENST00000429713 ERCC3P19447 782 aa8.98□□□□□ -0.97
SYNPO2-202ENST00000429713 CCDC38Q502W7 563 aa8.98□□□□□ -0.97
SYNPO2-202ENST00000429713 SUDS3Q9H7L9 328 aaPredicted RBP8.98□□□□□ -0.97
SYNPO2-202ENST00000429713 A0A1B0GUA9 196 aa8.98□□□□□ -0.97
SYNPO2-202ENST00000429713 TDO2P48775 406 aa8.98□□□□□ -0.97
SYNPO2-202ENST00000429713 FMNL3Q8IVF7 1028 aa8.98□□□□□ -0.97
SYNPO2-202ENST00000429713 TSPY26PQ9H489 355 aa8.98□□□□□ -0.97
SYNPO2-202ENST00000429713 DDX19BQ9UMR2 479 aa8.98□□□□□ -0.97
SYNPO2-202ENST00000429713 MRVI1Q9Y6F6 885 aa8.98□□□□□ -0.97
SYNPO2-202ENST00000429713 BCL11BQ9C0K0 894 aaPredicted RBP8.97□□□□□ -0.97
SYNPO2-202ENST00000429713 DAPK1P53355 1430 aa8.97□□□□□ -0.97
SYNPO2-202ENST00000429713 PNISRQ8TF01 805 aaKnown RBP8.97□□□□□ -0.97
SYNPO2-202ENST00000429713 CPSF2Q9P2I0 782 aaKnown RBP8.97□□□□□ -0.97
SYNPO2-202ENST00000429713 SWAP70Q9UH65 585 aa8.97□□□□□ -0.97
SYNPO2-202ENST00000429713 USP25Q9UHP3 1055 aa8.97□□□□□ -0.97
SYNPO2-202ENST00000429713 TERF2IPQ9NYB0 399 aa8.97□□□□□ -0.97
SYNPO2-202ENST00000429713 ELP1O95163 1332 aa8.97□□□□□ -0.97
SYNPO2-202ENST00000429713 MPHOSPH10O00566 681 aaKnown RBP8.97□□□□□ -0.97
SYNPO2-202ENST00000429713 C22orf23Q9BZE7 217 aa8.97□□□□□ -0.97
SYNPO2-202ENST00000429713 KIF1BO60333 1816 aa8.97□□□□□ -0.97
SYNPO2-202ENST00000429713 SPAG9O60271 1321 aaKnown RBP8.96□□□□□ -0.97
SYNPO2-202ENST00000429713 CCDC184Q52MB2 194 aa8.96□□□□□ -0.97
SYNPO2-202ENST00000429713 ZKSCAN5Q9Y2L8 839 aa8.96□□□□□ -0.97
SYNPO2-202ENST00000429713 PPM1EQ8WY54 764 aa8.96□□□□□ -0.97
SYNPO2-202ENST00000429713 CDK13Q14004 1512 aaKnown RBP8.96□□□□□ -0.97
SYNPO2-202ENST00000429713 SPATS2Q86XZ4 545 aaKnown RBP8.96□□□□□ -0.97
SYNPO2-202ENST00000429713 ZNF526Q8TF50 670 aaPredicted RBP8.96□□□□□ -0.97
SYNPO2-202ENST00000429713 ZNF428Q96B54 188 aa8.96□□□□□ -0.97
SYNPO2-202ENST00000429713 CDCA7LQ96GN5 454 aa8.96□□□□□ -0.97
SYNPO2-202ENST00000429713 HOOK1Q9UJC3 728 aaKnown RBP8.96□□□□□ -0.98
SYNPO2-202ENST00000429713 IFT140Q96RY7 1462 aa8.96□□□□□ -0.98
SYNPO2-202ENST00000429713 PLEKHG5O94827 1062 aa8.96□□□□□ -0.98
SYNPO2-202ENST00000429713 GEMIN8Q9NWZ8 242 aaKnown RBP8.96□□□□□ -0.98
SYNPO2-202ENST00000429713 TOPBP1Q92547 1522 aa8.96□□□□□ -0.98
SYNPO2-202ENST00000429713 NCOA1Q15788 1441 aa8.96□□□□□ -0.98
SYNPO2-202ENST00000429713 CCDC171Q6TFL3 1326 aa8.96□□□□□ -0.98
SYNPO2-202ENST00000429713 ZNF644Q9H582 1327 aaPredicted RBP8.96□□□□□ -0.98
SYNPO2-202ENST00000429713 ZNF500O60304 480 aaPredicted RBP8.96□□□□□ -0.98
SYNPO2-202ENST00000429713 CHMP3Q9Y3E7 222 aa8.96□□□□□ -0.98
SYNPO2-202ENST00000429713 AKAP17AQ02040 695 aaKnown RBP8.95□□□□□ -0.98
SYNPO2-202ENST00000429713 LMOD3Q0VAK6 560 aa8.95□□□□□ -0.98
SYNPO2-202ENST00000429713 MYO5CQ9NQX4 1742 aa8.95□□□□□ -0.98
SYNPO2-202ENST00000429713 KIF18AQ8NI77 898 aa8.95□□□□□ -0.98
SYNPO2-202ENST00000429713 TAOK2Q9UL54 1235 aa8.95□□□□□ -0.98
SYNPO2-202ENST00000429713 EPRSP07814 1512 aaKnown RBP8.95□□□□□ -0.98
SYNPO2-202ENST00000429713 A0A1B0GUL7 405 aa8.95□□□□□ -0.98
SYNPO2-202ENST00000429713 TMCO5BA8MYB1 307 aa8.95□□□□□ -0.98
SYNPO2-202ENST00000429713 GPATCH3Q96I76 525 aa8.95□□□□□ -0.98
SYNPO2-202ENST00000429713 CACNA1FO60840 1977 aa8.95□□□□□ -0.98
SYNPO2-202ENST00000429713 CCDC192P0DO97 292 aa8.95□□□□□ -0.98
SYNPO2-202ENST00000429713 ANKRD20A12PQ8NF67 263 aa8.95□□□□□ -0.98
SYNPO2-202ENST00000429713 FOXD4L5Q5VV16 416 aaPredicted RBP8.94□□□□□ -0.98
SYNPO2-202ENST00000429713 FOXD4L4Q8WXT5 416 aaPredicted RBP8.94□□□□□ -0.98
SYNPO2-202ENST00000429713 RUNDC1Q96C34 613 aa8.94□□□□□ -0.98
SYNPO2-202ENST00000429713 EFCAB2Q5VUJ9 269 aa8.94□□□□□ -0.98
SYNPO2-202ENST00000429713 DZIP1LQ8IYY4 767 aaKnown RBP8.94□□□□□ -0.98
SYNPO2-202ENST00000429713 PANK1Q8TE04 598 aa8.94□□□□□ -0.98
SYNPO2-202ENST00000429713 TRIM34Q9BYJ4 488 aa8.94□□□□□ -0.98
SYNPO2-202ENST00000429713 STK31Q9BXU1 1019 aa8.94□□□□□ -0.98
SYNPO2-202ENST00000429713 ADAMTS8Q9UP79 889 aa8.94□□□□□ -0.98
SYNPO2-202ENST00000429713 UTP14AQ9BVJ6 771 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms