RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 RREB1Q92766 1687 aa18.16■□□□□ 0.5
DDX39B-208ENST00000428098 SIRT1Q96EB6 747 aa18.16■□□□□ 0.5
DDX39B-208ENST00000428098 COL14A1Q05707 1796 aaKnown RBP18.16■□□□□ 0.5
DDX39B-208ENST00000428098 PDGFDQ9GZP0 370 aaPredicted RBP18.15■□□□□ 0.5
DDX39B-208ENST00000428098 ADGRB2O60241 1585 aa18.15■□□□□ 0.5
DDX39B-208ENST00000428098 RGL3Q3MIN7 710 aa18.14■□□□□ 0.49
DDX39B-208ENST00000428098 YTHDC2Q9H6S0 1430 aaKnown RBP18.13■□□□□ 0.49
DDX39B-208ENST00000428098 CHRNA2Q15822 529 aa18.12■□□□□ 0.49
DDX39B-208ENST00000428098 RRBP1Q9P2E9 1410 aaKnown RBP18.12■□□□□ 0.49
DDX39B-208ENST00000428098 SAFB2Q14151 953 aaKnown RBP eCLIP18.11■□□□□ 0.49
DDX39B-208ENST00000428098 PRDM11Q9NQV5 511 aa18.11■□□□□ 0.49
DDX39B-208ENST00000428098 STRN4Q9NRL3 753 aa18.11■□□□□ 0.49
DDX39B-208ENST00000428098 USP35Q9P2H5 1018 aa18.11■□□□□ 0.49
DDX39B-208ENST00000428098 PDE3BQ13370 1112 aa18.1■□□□□ 0.49
DDX39B-208ENST00000428098 IFT172Q9UG01 1749 aa18.09■□□□□ 0.49
DDX39B-208ENST00000428098 ANO8Q9HCE9 1232 aaPredicted RBP18.09■□□□□ 0.49
DDX39B-208ENST00000428098 KNDC1Q76NI1 1749 aa18.09■□□□□ 0.49
DDX39B-208ENST00000428098 TRPM3Q9HCF6 1732 aaPredicted RBP18.09■□□□□ 0.49
DDX39B-208ENST00000428098 CEP350Q5VT06 3117 aa18.08■□□□□ 0.49
DDX39B-208ENST00000428098 PTGER2P43116 358 aa18.08■□□□□ 0.48
DDX39B-208ENST00000428098 ZBTB7AO95365 584 aa18.07■□□□□ 0.48
DDX39B-208ENST00000428098 BARGINQ6ZT62 677 aa18.07■□□□□ 0.48
DDX39B-208ENST00000428098 PRAM1Q96QH2 718 aa18.07■□□□□ 0.48
DDX39B-208ENST00000428098 KIAA0232Q92628 1395 aa18.06■□□□□ 0.48
DDX39B-208ENST00000428098 ALS2Q96Q42 1657 aa18.06■□□□□ 0.48
DDX39B-208ENST00000428098 ACIN1Q9UKV3 1341 aaKnown RBP18.06■□□□□ 0.48
DDX39B-208ENST00000428098 SYT17Q9BSW7 474 aa18.06■□□□□ 0.48
DDX39B-208ENST00000428098 SLC4A1APQ9BWU0 796 aaKnown RBP18.06■□□□□ 0.48
DDX39B-208ENST00000428098 ZC3H6P61129 1189 aaKnown RBP18.05■□□□□ 0.48
DDX39B-208ENST00000428098 C14orf93Q9H972 538 aaKnown RBP18.05■□□□□ 0.48
DDX39B-208ENST00000428098 ATF5Q9Y2D1 282 aaPredicted RBP18.05■□□□□ 0.48
DDX39B-208ENST00000428098 GPRASP1Q5JY77 1395 aa18.04■□□□□ 0.48
DDX39B-208ENST00000428098 PRR36Q9H6K5 1346 aa18.04■□□□□ 0.48
DDX39B-208ENST00000428098 PTF1AQ7RTS3 328 aa18.04■□□□□ 0.48
DDX39B-208ENST00000428098 PIK3C2GO75747 1445 aa18.04■□□□□ 0.48
DDX39B-208ENST00000428098 SPATA31E1Q6ZUB1 1445 aa18.04■□□□□ 0.48
DDX39B-208ENST00000428098 NRKQ7Z2Y5 1582 aa18.04■□□□□ 0.48
DDX39B-208ENST00000428098 ANKRD30BQ9BXX2 1392 aa18.04■□□□□ 0.48
DDX39B-208ENST00000428098 PAK3O75914 559 aaPredicted RBP18.03■□□□□ 0.48
DDX39B-208ENST00000428098 CFAP70Q5T0N1 1121 aa18.03■□□□□ 0.48
DDX39B-208ENST00000428098 LARP1Q6PKG0 1096 aaKnown RBP18.03■□□□□ 0.48
DDX39B-208ENST00000428098 PROM2Q8N271 834 aa18.03■□□□□ 0.48
DDX39B-208ENST00000428098 FHDC1Q9C0D6 1143 aaPredicted RBP18.03■□□□□ 0.48
DDX39B-208ENST00000428098 ANKARQ7Z5J8 1434 aa18.03■□□□□ 0.48
DDX39B-208ENST00000428098 PLSCR1O15162 318 aa18.02■□□□□ 0.48
DDX39B-208ENST00000428098 CRYBG1Q9Y4K1 1723 aa18.02■□□□□ 0.48
DDX39B-208ENST00000428098 EVA1CP58658 441 aa18.01■□□□□ 0.47
DDX39B-208ENST00000428098 HIRIP3Q9BW71 556 aaPredicted RBP18.01■□□□□ 0.47
DDX39B-208ENST00000428098 CASZ1Q86V15 1759 aa18.01■□□□□ 0.47
DDX39B-208ENST00000428098 PPARGC1BQ86YN6 1023 aaKnown RBP18■□□□□ 0.47
DDX39B-208ENST00000428098 TCP11L2Q8N4U5 519 aa18■□□□□ 0.47
DDX39B-208ENST00000428098 DHX57Q6P158 1386 aaKnown RBP17.99■□□□□ 0.47
DDX39B-208ENST00000428098 MYOM1P52179 1685 aa17.99■□□□□ 0.47
DDX39B-208ENST00000428098 SSH2Q76I76 1423 aa17.98■□□□□ 0.47
DDX39B-208ENST00000428098 NUTM2GQ5VZR2 741 aa17.98■□□□□ 0.47
DDX39B-208ENST00000428098 POGKQ9P215 609 aa17.98■□□□□ 0.47
DDX39B-208ENST00000428098 CHD4Q14839 1912 aa17.98■□□□□ 0.47
DDX39B-208ENST00000428098 NGDNQ8NEJ9 315 aaKnown RBP17.97■□□□□ 0.47
DDX39B-208ENST00000428098 SGIP1Q9BQI5 828 aa17.97■□□□□ 0.47
DDX39B-208ENST00000428098 BCL11BQ9C0K0 894 aaPredicted RBP17.96■□□□□ 0.47
DDX39B-208ENST00000428098 MINK1Q8N4C8 1332 aaPredicted RBP17.95■□□□□ 0.46
DDX39B-208ENST00000428098 GIGYF1O75420 1035 aaPredicted RBP17.93■□□□□ 0.46
DDX39B-208ENST00000428098 WASLO00401 505 aaPredicted RBP17.92■□□□□ 0.46
DDX39B-208ENST00000428098 THRAP3Q9Y2W1 955 aaKnown RBP17.92■□□□□ 0.46
DDX39B-208ENST00000428098 PEAK1Q9H792 1746 aa17.9■□□□□ 0.46
DDX39B-208ENST00000428098 C11orf95C9JLR9 678 aaPredicted RBP17.9■□□□□ 0.46
DDX39B-208ENST00000428098 SLC15A2Q16348 729 aa17.9■□□□□ 0.46
DDX39B-208ENST00000428098 TRAK1Q9UPV9 953 aa17.9■□□□□ 0.46
DDX39B-208ENST00000428098 MTFR1LQ9H019 292 aa17.89■□□□□ 0.45
DDX39B-208ENST00000428098 TXNRD1Q16881 649 aa17.88■□□□□ 0.45
DDX39B-208ENST00000428098 ARXQ96QS3 562 aa17.88■□□□□ 0.45
DDX39B-208ENST00000428098 STK32BQ9NY57 414 aa17.88■□□□□ 0.45
DDX39B-208ENST00000428098 SBF2Q86WG5 1849 aa17.88■□□□□ 0.45
DDX39B-208ENST00000428098 OVOS2A0A0G2JMS6 1433 aa17.88■□□□□ 0.45
DDX39B-208ENST00000428098 OVOS2A0A0J9YW53 1432 aa17.88■□□□□ 0.45
DDX39B-208ENST00000428098 OVOS2Q6IE36 1432 aa17.88■□□□□ 0.45
DDX39B-208ENST00000428098 DLC1Q96QB1 1528 aa17.88■□□□□ 0.45
DDX39B-208ENST00000428098 PHRF1Q9P1Y6 1649 aaKnown RBP17.87■□□□□ 0.45
DDX39B-208ENST00000428098 TULP4Q9NRJ4 1543 aa17.87■□□□□ 0.45
DDX39B-208ENST00000428098 RGPD3A6NKT7 1758 aaPredicted RBP17.86■□□□□ 0.45
DDX39B-208ENST00000428098 RGPD4Q7Z3J3 1758 aa17.86■□□□□ 0.45
DDX39B-208ENST00000428098 GPR162Q16538 588 aa17.86■□□□□ 0.45
DDX39B-208ENST00000428098 MARCH10Q8NA82 808 aaPredicted RBP17.86■□□□□ 0.45
DDX39B-208ENST00000428098 PARP4Q9UKK3 1724 aaKnown RBP17.86■□□□□ 0.45
DDX39B-208ENST00000428098 NUDT16Q96DE0 195 aaKnown RBP17.85■□□□□ 0.45
DDX39B-208ENST00000428098 LMO7Q8WWI1 1683 aa17.84■□□□□ 0.45
DDX39B-208ENST00000428098 CPDO75976 1380 aa17.84■□□□□ 0.45
DDX39B-208ENST00000428098 DDB1Q16531 1140 aa17.84■□□□□ 0.45
DDX39B-208ENST00000428098 EIF3AQ14152 1382 aaKnown RBP17.83■□□□□ 0.45
DDX39B-208ENST00000428098 MPHOSPH9Q99550 1183 aa17.83■□□□□ 0.44
DDX39B-208ENST00000428098 ATP7BP35670 1465 aa17.82■□□□□ 0.44
DDX39B-208ENST00000428098 GOLGB1Q14789 3259 aaKnown RBP17.82■□□□□ 0.44
DDX39B-208ENST00000428098 MAP3K5Q99683 1374 aa17.82■□□□□ 0.44
DDX39B-208ENST00000428098 ABTB2Q8N961 1025 aa17.82■□□□□ 0.44
DDX39B-208ENST00000428098 COL5A2P05997 1499 aaPredicted RBP17.82■□□□□ 0.44
DDX39B-208ENST00000428098 GCP02774 474 aa17.81■□□□□ 0.44
DDX39B-208ENST00000428098 CRB1P82279 1406 aa17.81■□□□□ 0.44
DDX39B-208ENST00000428098 USP19O94966 1318 aa17.8■□□□□ 0.44
DDX39B-208ENST00000428098 ACEP12821 1306 aa17.8■□□□□ 0.44
DDX39B-208ENST00000428098 ADGRB1O14514 1584 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms