RNA–Protein interactions for RNA: ENST00000427623.5

FREM1-205, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 5

Gene FREM1, Length 1,421 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-205ENST00000427623 RUNDC1Q96C34 613 aa11.31□□□□□ -0.6
FREM1-205ENST00000427623 CFAP53Q96M91 514 aa11.31□□□□□ -0.6
FREM1-205ENST00000427623 UPF2Q9HAU5 1272 aaKnown RBP11.31□□□□□ -0.6
FREM1-205ENST00000427623 NRXN1Q9ULB1 1477 aa11.31□□□□□ -0.6
FREM1-205ENST00000427623 RIMS2Q9UQ26 1411 aa11.3□□□□□ -0.6
FREM1-205ENST00000427623 SETD1AO15047 1707 aaKnown RBP11.3□□□□□ -0.6
FREM1-205ENST00000427623 PITPNM1O00562 1244 aa11.3□□□□□ -0.6
FREM1-205ENST00000427623 CCDC27Q2M243 656 aa11.3□□□□□ -0.6
FREM1-205ENST00000427623 ILDR1Q86SU0 546 aaPredicted RBP11.3□□□□□ -0.6
FREM1-205ENST00000427623 CCDC146Q8IYE0 955 aa11.3□□□□□ -0.6
FREM1-205ENST00000427623 THEMISQ8N1K5 641 aaPredicted RBP11.3□□□□□ -0.6
FREM1-205ENST00000427623 RPGRIP1LQ68CZ1 1315 aa11.3□□□□□ -0.6
FREM1-205ENST00000427623 ZFYVE9O95405 1425 aa11.3□□□□□ -0.6
FREM1-205ENST00000427623 NRXN3Q9Y4C0 1643 aa11.3□□□□□ -0.6
FREM1-205ENST00000427623 TMEM2Q9UHN6 1383 aa11.29□□□□□ -0.6
FREM1-205ENST00000427623 CT47B1P0C2W7 299 aaPredicted RBP11.29□□□□□ -0.6
FREM1-205ENST00000427623 RGS3P49796 1198 aa11.29□□□□□ -0.6
FREM1-205ENST00000427623 HSPA2P54652 639 aa11.29□□□□□ -0.6
FREM1-205ENST00000427623 MORC1Q86VD1 984 aa11.29□□□□□ -0.6
FREM1-205ENST00000427623 NSD2O96028 1365 aa11.28□□□□□ -0.6
FREM1-205ENST00000427623 CFAP70Q5T0N1 1121 aa11.28□□□□□ -0.6
FREM1-205ENST00000427623 WWC1Q8IX03 1113 aa11.28□□□□□ -0.6
FREM1-205ENST00000427623 USP32Q8NFA0 1604 aa11.27□□□□□ -0.6
FREM1-205ENST00000427623 MYH16Q9H6N6 1097 aa11.27□□□□□ -0.6
FREM1-205ENST00000427623 CHD2O14647 1828 aaKnown RBP11.27□□□□□ -0.61
FREM1-205ENST00000427623 VIRMAQ69YN4 1812 aaKnown RBP11.27□□□□□ -0.61
FREM1-205ENST00000427623 DIP2AQ14689 1571 aa11.27□□□□□ -0.61
FREM1-205ENST00000427623 BCAR3O75815 825 aa11.26□□□□□ -0.61
FREM1-205ENST00000427623 RWDD1Q9H446 243 aaPredicted RBP11.26□□□□□ -0.61
FREM1-205ENST00000427623 MED14O60244 1454 aa11.26□□□□□ -0.61
FREM1-205ENST00000427623 CARD14Q9BXL6 1004 aa11.26□□□□□ -0.61
FREM1-205ENST00000427623 ANKLE2Q86XL3 938 aa11.25□□□□□ -0.61
FREM1-205ENST00000427623 EID1Q9Y6B2 187 aa11.25□□□□□ -0.61
FREM1-205ENST00000427623 ADGRF5Q8IZF2 1346 aa11.24□□□□□ -0.61
FREM1-205ENST00000427623 NPHP4O75161 1426 aaPredicted RBP11.24□□□□□ -0.61
FREM1-205ENST00000427623 NSD3Q9BZ95 1437 aa11.24□□□□□ -0.61
FREM1-205ENST00000427623 HDGFP51858 240 aaKnown RBP11.24□□□□□ -0.61
FREM1-205ENST00000427623 RARSP54136 660 aaKnown RBP11.24□□□□□ -0.61
FREM1-205ENST00000427623 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.24□□□□□ -0.61
FREM1-205ENST00000427623 C14orf93Q9H972 538 aaKnown RBP11.24□□□□□ -0.61
FREM1-205ENST00000427623 STRCP1A6NGW2 1772 aa11.23□□□□□ -0.61
FREM1-205ENST00000427623 KNDC1Q76NI1 1749 aa11.23□□□□□ -0.61
FREM1-205ENST00000427623 IGHDP01880 384 aa11.23□□□□□ -0.61
FREM1-205ENST00000427623 TXNDC2Q86VQ3 553 aa11.23□□□□□ -0.61
FREM1-205ENST00000427623 SKAP1Q86WV1 359 aa11.23□□□□□ -0.61
FREM1-205ENST00000427623 NCKAP5LQ9HCH0 1330 aa11.23□□□□□ -0.61
FREM1-205ENST00000427623 PLEKHG1Q9ULL1 1385 aa11.23□□□□□ -0.61
FREM1-205ENST00000427623 ALKQ9UM73 1620 aa11.23□□□□□ -0.61
FREM1-205ENST00000427623 IQSEC2Q5JU85 1478 aa11.22□□□□□ -0.61
FREM1-205ENST00000427623 LTKP29376 864 aa11.22□□□□□ -0.61
FREM1-205ENST00000427623 MKRN4PQ13434 485 aaPredicted RBP11.22□□□□□ -0.61
FREM1-205ENST00000427623 L1TD1Q5T7N2 865 aaKnown RBP11.22□□□□□ -0.61
FREM1-205ENST00000427623 NUTM2DQ5VT03 806 aaPredicted RBP11.22□□□□□ -0.61
FREM1-205ENST00000427623 FRAT1Q92837 279 aaPredicted RBP11.22□□□□□ -0.61
FREM1-205ENST00000427623 PNNQ9H307 717 aaKnown RBP11.22□□□□□ -0.61
FREM1-205ENST00000427623 COG6Q9Y2V7 657 aa11.22□□□□□ -0.61
FREM1-205ENST00000427623 SLC4A3P48751 1232 aa11.21□□□□□ -0.61
FREM1-205ENST00000427623 TCP11L2Q8N4U5 519 aa11.21□□□□□ -0.61
FREM1-205ENST00000427623 EVC2Q86UK5 1308 aa11.21□□□□□ -0.61
FREM1-205ENST00000427623 VGFO15240 615 aaPredicted RBP11.2□□□□□ -0.62
FREM1-205ENST00000427623 IL27Q8NEV9 243 aa11.2□□□□□ -0.62
FREM1-205ENST00000427623 SHPRHQ149N8 1683 aa11.2□□□□□ -0.62
FREM1-205ENST00000427623 XRN1Q8IZH2 1706 aaKnown RBP11.2□□□□□ -0.62
FREM1-205ENST00000427623 EVX2Q03828 476 aa11.19□□□□□ -0.62
FREM1-205ENST00000427623 ZKSCAN2Q63HK3 967 aa11.19□□□□□ -0.62
FREM1-205ENST00000427623 PANK1Q8TE04 598 aa11.19□□□□□ -0.62
FREM1-205ENST00000427623 ANKRD36BQ8N2N9 1353 aa11.19□□□□□ -0.62
FREM1-205ENST00000427623 ABCC11Q96J66 1382 aa11.19□□□□□ -0.62
FREM1-205ENST00000427623 NWD1Q149M9 1564 aa11.19□□□□□ -0.62
FREM1-205ENST00000427623 QRICH2Q9H0J4 1663 aa11.19□□□□□ -0.62
FREM1-205ENST00000427623 XIRP1Q702N8 1843 aaKnown RBP11.19□□□□□ -0.62
FREM1-205ENST00000427623 FRAT2O75474 233 aaPredicted RBP11.18□□□□□ -0.62
FREM1-205ENST00000427623 CHMP4BQ9H444 224 aaKnown RBP11.18□□□□□ -0.62
FREM1-205ENST00000427623 USP19O94966 1318 aa11.18□□□□□ -0.62
FREM1-205ENST00000427623 IL16Q14005 1332 aa11.18□□□□□ -0.62
FREM1-205ENST00000427623 ADAMTS13Q76LX8 1427 aa11.18□□□□□ -0.62
FREM1-205ENST00000427623 ARHGEF28Q8N1W1 1705 aaKnown RBP11.18□□□□□ -0.62
FREM1-205ENST00000427623 EIF5BO60841 1220 aaKnown RBP11.18□□□□□ -0.62
FREM1-205ENST00000427623 MVPQ14764 893 aaKnown RBP11.18□□□□□ -0.62
FREM1-205ENST00000427623 TBC1D32Q96NH3 1257 aa11.18□□□□□ -0.62
FREM1-205ENST00000427623 ADGRB1O14514 1584 aa11.17□□□□□ -0.62
FREM1-205ENST00000427623 MTHFSP49914 203 aa11.17□□□□□ -0.62
FREM1-205ENST00000427623 LHX8Q68G74 356 aa11.17□□□□□ -0.62
FREM1-205ENST00000427623 FTSJ3Q8IY81 847 aaKnown RBP11.17□□□□□ -0.62
FREM1-205ENST00000427623 DZIP1LQ8IYY4 767 aaKnown RBP11.17□□□□□ -0.62
FREM1-205ENST00000427623 FAM43AQ8N2R8 423 aa11.17□□□□□ -0.62
FREM1-205ENST00000427623 PDZRN3Q9UPQ7 1066 aa11.17□□□□□ -0.62
FREM1-205ENST00000427623 TRAK1Q9UPV9 953 aa11.17□□□□□ -0.62
FREM1-205ENST00000427623 IPO8O15397 1037 aaKnown RBP11.16□□□□□ -0.62
FREM1-205ENST00000427623 HDAC1Q13547 482 aaPredicted RBP11.16□□□□□ -0.62
FREM1-205ENST00000427623 SLC12A5Q9H2X9 1139 aa11.16□□□□□ -0.62
FREM1-205ENST00000427623 DDX19BQ9UMR2 479 aa11.16□□□□□ -0.62
FREM1-205ENST00000427623 U2AF1L5P0DN76 240 aaPredicted RBP11.15□□□□□ -0.62
FREM1-205ENST00000427623 U2AF1Q01081 240 aaKnown RBP eCLIP11.15□□□□□ -0.627e-7■□□□□ 9
FREM1-205ENST00000427623 ADGRB2O60241 1585 aa11.15□□□□□ -0.62
FREM1-205ENST00000427623 NEUROD2Q15784 382 aa11.14□□□□□ -0.63
FREM1-205ENST00000427623 ZNF428Q96B54 188 aa11.14□□□□□ -0.63
FREM1-205ENST00000427623 SLC26A8Q96RN1 970 aa11.14□□□□□ -0.63
FREM1-205ENST00000427623 PCDHB15Q9Y5E8 787 aa11.14□□□□□ -0.63
FREM1-205ENST00000427623 CPS1P31327 1500 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms