RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 CENPJQ9HC77 1338 aaPredicted RBP23.11■■□□□ 1.29
HLA-DQB2-230ENST00000427449 PSME1Q06323 249 aa23.09■■□□□ 1.29
HLA-DQB2-230ENST00000427449 TRIM26Q12899 539 aaPredicted RBP23.09■■□□□ 1.29
HLA-DQB2-230ENST00000427449 NEUROD1Q13562 356 aa23.08■■□□□ 1.29
HLA-DQB2-230ENST00000427449 UPF1Q92900 1129 aaKnown RBP eCLIP23.08■■□□□ 1.29
HLA-DQB2-230ENST00000427449 USP54Q70EL1 1684 aa23.08■■□□□ 1.29
HLA-DQB2-230ENST00000427449 PPIP5K1Q6PFW1 1433 aa23.08■■□□□ 1.28
HLA-DQB2-230ENST00000427449 SSH2Q76I76 1423 aa23.08■■□□□ 1.28
HLA-DQB2-230ENST00000427449 THSD7AQ9UPZ6 1657 aa23.07■■□□□ 1.28
HLA-DQB2-230ENST00000427449 PLEKHG3A1L390 1219 aa23.07■■□□□ 1.28
HLA-DQB2-230ENST00000427449 TRPC5Q9UL62 973 aaPredicted RBP23.07■■□□□ 1.28
HLA-DQB2-230ENST00000427449 ROCK2O75116 1388 aaKnown RBP23.06■■□□□ 1.28
HLA-DQB2-230ENST00000427449 SBNO2Q9Y2G9 1366 aa23.05■■□□□ 1.28
HLA-DQB2-230ENST00000427449 ACEP12821 1306 aa23.05■■□□□ 1.28
HLA-DQB2-230ENST00000427449 SLIT3O75094 1523 aa23.04■■□□□ 1.28
HLA-DQB2-230ENST00000427449 COL18A1P39060 1754 aa23.04■■□□□ 1.28
HLA-DQB2-230ENST00000427449 CCDC61Q9Y6R9 512 aa23.03■■□□□ 1.28
HLA-DQB2-230ENST00000427449 UNC5CLQ8IV45 518 aa23.02■■□□□ 1.28
HLA-DQB2-230ENST00000427449 USP6P35125 1406 aa23.01■■□□□ 1.27
HLA-DQB2-230ENST00000427449 FAM83GA6ND36 823 aa23.01■■□□□ 1.27
HLA-DQB2-230ENST00000427449 USP19O94966 1318 aa23.01■■□□□ 1.27
HLA-DQB2-230ENST00000427449 CD163L1Q9NR16 1453 aa23■■□□□ 1.27
HLA-DQB2-230ENST00000427449 GJD4Q96KN9 370 aaPredicted RBP23■■□□□ 1.27
HLA-DQB2-230ENST00000427449 CABP2Q9NPB3 220 aa23■■□□□ 1.27
HLA-DQB2-230ENST00000427449 NGDNQ8NEJ9 315 aaKnown RBP22.99■■□□□ 1.27
HLA-DQB2-230ENST00000427449 WNK3Q9BYP7 1800 aa22.98■■□□□ 1.27
HLA-DQB2-230ENST00000427449 CPSF1Q10570 1443 aaKnown RBP22.97■■□□□ 1.27
HLA-DQB2-230ENST00000427449 CAMTA1Q9Y6Y1 1673 aa22.97■■□□□ 1.27
HLA-DQB2-230ENST00000427449 VPS72Q15906 364 aa22.96■■□□□ 1.27
HLA-DQB2-230ENST00000427449 RGPD5Q99666 1765 aa22.96■■□□□ 1.27
HLA-DQB2-230ENST00000427449 LMOD2Q6P5Q4 547 aa22.95■■□□□ 1.26
HLA-DQB2-230ENST00000427449 KIAA0232Q92628 1395 aa22.94■■□□□ 1.26
HLA-DQB2-230ENST00000427449 TONSLQ96HA7 1378 aa22.94■■□□□ 1.26
HLA-DQB2-230ENST00000427449 BRD4O60885 1362 aaPredicted RBP22.93■■□□□ 1.26
HLA-DQB2-230ENST00000427449 PLEKHG5O94827 1062 aa22.93■■□□□ 1.26
HLA-DQB2-230ENST00000427449 CPDO75976 1380 aa22.92■■□□□ 1.26
HLA-DQB2-230ENST00000427449 TNS1Q9HBL0 1735 aaKnown RBP22.92■■□□□ 1.26
HLA-DQB2-230ENST00000427449 ONECUT3O60422 494 aaPredicted RBP22.92■■□□□ 1.26
HLA-DQB2-230ENST00000427449 SRPK2P78362 688 aaKnown RBP22.92■■□□□ 1.26
HLA-DQB2-230ENST00000427449 NFAT5O94916 1531 aa22.92■■□□□ 1.26
HLA-DQB2-230ENST00000427449 ATAD2Q6PL18 1390 aa22.91■■□□□ 1.26
HLA-DQB2-230ENST00000427449 EVC2Q86UK5 1308 aa22.89■■□□□ 1.26
HLA-DQB2-230ENST00000427449 PAK3O75914 559 aaPredicted RBP22.89■■□□□ 1.25
HLA-DQB2-230ENST00000427449 CABP1Q9NZU7 370 aa22.89■■□□□ 1.25
HLA-DQB2-230ENST00000427449 PARP4Q9UKK3 1724 aaKnown RBP22.88■■□□□ 1.25
HLA-DQB2-230ENST00000427449 MYOM1P52179 1685 aa22.88■■□□□ 1.25
HLA-DQB2-230ENST00000427449 BTG4Q9NY30 223 aa22.88■■□□□ 1.25
HLA-DQB2-230ENST00000427449 NUTM2GQ5VZR2 741 aa22.87■■□□□ 1.25
HLA-DQB2-230ENST00000427449 LTN1O94822 1766 aa22.86■■□□□ 1.25
HLA-DQB2-230ENST00000427449 HAP1P54257 671 aaPredicted RBP22.86■■□□□ 1.25
HLA-DQB2-230ENST00000427449 COL5A2P05997 1499 aaPredicted RBP22.85■■□□□ 1.25
HLA-DQB2-230ENST00000427449 SPATA31A5Q5VU36 1347 aa22.85■■□□□ 1.25
HLA-DQB2-230ENST00000427449 SPATA31A7Q8IWB4 1347 aa22.85■■□□□ 1.25
HLA-DQB2-230ENST00000427449 TESK2Q96S53 571 aa22.85■■□□□ 1.25
HLA-DQB2-230ENST00000427449 CARD11Q9BXL7 1154 aa22.84■■□□□ 1.25
HLA-DQB2-230ENST00000427449 RGPD1P0DJD0 1748 aa22.84■■□□□ 1.25
HLA-DQB2-230ENST00000427449 LRRC37A3O60309 1634 aa22.82■■□□□ 1.24
HLA-DQB2-230ENST00000427449 PEAK1Q9H792 1746 aa22.82■■□□□ 1.24
HLA-DQB2-230ENST00000427449 CHRNA2Q15822 529 aa22.82■■□□□ 1.24
HLA-DQB2-230ENST00000427449 SEPT12Q8IYM1 358 aa22.81■■□□□ 1.24
HLA-DQB2-230ENST00000427449 ABTB2Q8N961 1025 aa22.81■■□□□ 1.24
HLA-DQB2-230ENST00000427449 PRDM11Q9NQV5 511 aa22.81■■□□□ 1.24
HLA-DQB2-230ENST00000427449 ABCC6O95255 1503 aa22.81■■□□□ 1.24
HLA-DQB2-230ENST00000427449 SPATA31A1Q5TZJ5 1347 aa22.8■■□□□ 1.24
HLA-DQB2-230ENST00000427449 ZC3H6P61129 1189 aaKnown RBP22.79■■□□□ 1.24
HLA-DQB2-230ENST00000427449 TTC21BQ7Z4L5 1316 aa22.79■■□□□ 1.24
HLA-DQB2-230ENST00000427449 SBF2Q86WG5 1849 aa22.78■■□□□ 1.24
HLA-DQB2-230ENST00000427449 GCP02774 474 aa22.77■■□□□ 1.24
HLA-DQB2-230ENST00000427449 BLMP54132 1417 aaPredicted RBP22.76■■□□□ 1.23
HLA-DQB2-230ENST00000427449 A0A1W2PP64 1363 aa22.76■■□□□ 1.23
HLA-DQB2-230ENST00000427449 USP31Q70CQ4 1352 aa22.76■■□□□ 1.23
HLA-DQB2-230ENST00000427449 OVOS2A0A0J9YW53 1432 aa22.75■■□□□ 1.23
HLA-DQB2-230ENST00000427449 OVOS2Q6IE36 1432 aa22.75■■□□□ 1.23
HLA-DQB2-230ENST00000427449 FAM98CQ17RN3 349 aaKnown RBP22.75■■□□□ 1.23
HLA-DQB2-230ENST00000427449 NLRP13Q86W25 1043 aa22.75■■□□□ 1.23
HLA-DQB2-230ENST00000427449 AATKQ6ZMQ8 1374 aa22.75■■□□□ 1.23
HLA-DQB2-230ENST00000427449 KTN1Q86UP2 1357 aaKnown RBP22.74■■□□□ 1.23
HLA-DQB2-230ENST00000427449 RREB1Q92766 1687 aa22.73■■□□□ 1.23
HLA-DQB2-230ENST00000427449 TTC21AQ8NDW8 1320 aa22.73■■□□□ 1.23
HLA-DQB2-230ENST00000427449 USP47Q96K76 1375 aa22.73■■□□□ 1.23
HLA-DQB2-230ENST00000427449 EDC4Q6P2E9 1401 aaKnown RBP22.73■■□□□ 1.23
HLA-DQB2-230ENST00000427449 ST20-MTHFSA0A0A6YYL1 179 aa22.72■■□□□ 1.23
HLA-DQB2-230ENST00000427449 KIF20BQ96Q89 1820 aa22.72■■□□□ 1.23
HLA-DQB2-230ENST00000427449 CLSPNQ9HAW4 1339 aa22.72■■□□□ 1.23
HLA-DQB2-230ENST00000427449 PUS7Q96PZ0 661 aaKnown RBP22.71■■□□□ 1.23
HLA-DQB2-230ENST00000427449 SRCAPQ6ZRS2 3230 aa22.7■■□□□ 1.22
HLA-DQB2-230ENST00000427449 NLRP6P59044 892 aa22.7■■□□□ 1.22
HLA-DQB2-230ENST00000427449 LARP1Q6PKG0 1096 aaKnown RBP22.7■■□□□ 1.22
HLA-DQB2-230ENST00000427449 KRT27Q7Z3Y8 459 aa22.7■■□□□ 1.22
HLA-DQB2-230ENST00000427449 ZNF692Q9BU19 519 aaPredicted RBP22.7■■□□□ 1.22
HLA-DQB2-230ENST00000427449 ZRANB1Q9UGI0 708 aa22.7■■□□□ 1.22
HLA-DQB2-230ENST00000427449 CCDC9Q9Y3X0 531 aaKnown RBP22.7■■□□□ 1.22
HLA-DQB2-230ENST00000427449 CRB1P82279 1406 aa22.69■■□□□ 1.22
HLA-DQB2-230ENST00000427449 SLC12A5Q9H2X9 1139 aa22.69■■□□□ 1.22
HLA-DQB2-230ENST00000427449 AXIN2Q9Y2T1 843 aa22.68■■□□□ 1.22
HLA-DQB2-230ENST00000427449 DISP2A7MBM2 1401 aa22.67■■□□□ 1.22
HLA-DQB2-230ENST00000427449 BARGINQ6ZT62 677 aa22.67■■□□□ 1.22
HLA-DQB2-230ENST00000427449 ARHGEF25Q86VW2 580 aa22.67■■□□□ 1.22
HLA-DQB2-230ENST00000427449 STRN4Q9NRL3 753 aa22.67■■□□□ 1.22
HLA-DQB2-230ENST00000427449 RGPD2P0DJD1 1756 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms