RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 ABCC11Q96J66 1382 aa18.57■□□□□ 0.56
SGCE-203ENST00000425444 NINLQ9Y2I6 1382 aa18.57■□□□□ 0.56
SGCE-203ENST00000425444 SENP3-EIF4A1A0A087X0R7 540 aa18.57■□□□□ 0.56
SGCE-203ENST00000425444 KCNQ2O43526 872 aa18.56■□□□□ 0.56
SGCE-203ENST00000425444 IFFO2Q5TF58 517 aa18.56■□□□□ 0.56
SGCE-203ENST00000425444 NRXN1Q9ULB1 1477 aa18.56■□□□□ 0.56
SGCE-203ENST00000425444 THSD7AQ9UPZ6 1657 aa18.56■□□□□ 0.56
SGCE-203ENST00000425444 COL14A1Q05707 1796 aaKnown RBP18.55■□□□□ 0.56
SGCE-203ENST00000425444 ZNF784Q8NCA9 323 aaPredicted RBP18.55■□□□□ 0.56
SGCE-203ENST00000425444 PMFBP1Q8TBY8 1022 aa18.54■□□□□ 0.56
SGCE-203ENST00000425444 KNDC1Q76NI1 1749 aa18.53■□□□□ 0.56
SGCE-203ENST00000425444 YTHDC2Q9H6S0 1430 aaKnown RBP18.53■□□□□ 0.56
SGCE-203ENST00000425444 CFAP70Q5T0N1 1121 aa18.52■□□□□ 0.56
SGCE-203ENST00000425444 CAMTA1Q9Y6Y1 1673 aa18.52■□□□□ 0.56
SGCE-203ENST00000425444 NUP188Q5SRE5 1749 aa18.52■□□□□ 0.55
SGCE-203ENST00000425444 RREB1Q92766 1687 aa18.51■□□□□ 0.55
SGCE-203ENST00000425444 C14orf93Q9H972 538 aaKnown RBP18.51■□□□□ 0.55
SGCE-203ENST00000425444 DCAF11Q8TEB1 546 aa18.5■□□□□ 0.55
SGCE-203ENST00000425444 PRDM11Q9NQV5 511 aa18.5■□□□□ 0.55
SGCE-203ENST00000425444 KDM2AQ9Y2K7 1162 aa18.5■□□□□ 0.55
SGCE-203ENST00000425444 DHX57Q6P158 1386 aaKnown RBP18.5■□□□□ 0.55
SGCE-203ENST00000425444 SPATA31A1Q5TZJ5 1347 aa18.49■□□□□ 0.55
SGCE-203ENST00000425444 PDE3BQ13370 1112 aa18.48■□□□□ 0.55
SGCE-203ENST00000425444 SAFB2Q14151 953 aaKnown RBP eCLIP18.48■□□□□ 0.55
SGCE-203ENST00000425444 SIRT1Q96EB6 747 aa18.47■□□□□ 0.55
SGCE-203ENST00000425444 STRN4Q9NRL3 753 aa18.47■□□□□ 0.55
SGCE-203ENST00000425444 C1QTNF8P60827 252 aa18.46■□□□□ 0.55
SGCE-203ENST00000425444 USP35Q9P2H5 1018 aa18.46■□□□□ 0.55
SGCE-203ENST00000425444 GPRASP1Q5JY77 1395 aa18.45■□□□□ 0.54
SGCE-203ENST00000425444 TRPM3Q9HCF6 1732 aaPredicted RBP18.44■□□□□ 0.54
SGCE-203ENST00000425444 STAC3Q96MF2 364 aa18.44■□□□□ 0.54
SGCE-203ENST00000425444 ALS2Q96Q42 1657 aa18.44■□□□□ 0.54
SGCE-203ENST00000425444 CHRNA2Q15822 529 aa18.43■□□□□ 0.54
SGCE-203ENST00000425444 PRAM1Q96QH2 718 aa18.43■□□□□ 0.54
SGCE-203ENST00000425444 PAK3O75914 559 aaPredicted RBP18.42■□□□□ 0.54
SGCE-203ENST00000425444 ADGRB1O14514 1584 aa18.42■□□□□ 0.54
SGCE-203ENST00000425444 GOLGB1Q14789 3259 aaKnown RBP18.41■□□□□ 0.54
SGCE-203ENST00000425444 ANKARQ7Z5J8 1434 aa18.41■□□□□ 0.54
SGCE-203ENST00000425444 DLC1Q96QB1 1528 aa18.41■□□□□ 0.54
SGCE-203ENST00000425444 POGKQ9P215 609 aa18.41■□□□□ 0.54
SGCE-203ENST00000425444 KIAA0232Q92628 1395 aa18.41■□□□□ 0.54
SGCE-203ENST00000425444 TRAK1Q9UPV9 953 aa18.4■□□□□ 0.54
SGCE-203ENST00000425444 EVA1CP58658 441 aa18.39■□□□□ 0.53
SGCE-203ENST00000425444 BARGINQ6ZT62 677 aa18.39■□□□□ 0.53
SGCE-203ENST00000425444 NRKQ7Z2Y5 1582 aa18.38■□□□□ 0.53
SGCE-203ENST00000425444 CHD4Q14839 1912 aa18.37■□□□□ 0.53
SGCE-203ENST00000425444 ZBTB7AO95365 584 aa18.37■□□□□ 0.53
SGCE-203ENST00000425444 ZC3H6P61129 1189 aaKnown RBP18.37■□□□□ 0.53
SGCE-203ENST00000425444 NGDNQ8NEJ9 315 aaKnown RBP18.37■□□□□ 0.53
SGCE-203ENST00000425444 CRYBG1Q9Y4K1 1723 aa18.37■□□□□ 0.53
SGCE-203ENST00000425444 HIRIP3Q9BW71 556 aaPredicted RBP18.36■□□□□ 0.53
SGCE-203ENST00000425444 ANO8Q9HCE9 1232 aaPredicted RBP18.36■□□□□ 0.53
SGCE-203ENST00000425444 PDGFDQ9GZP0 370 aaPredicted RBP18.35■□□□□ 0.53
SGCE-203ENST00000425444 TCP11L2Q8N4U5 519 aa18.34■□□□□ 0.53
SGCE-203ENST00000425444 ATF5Q9Y2D1 282 aaPredicted RBP18.34■□□□□ 0.53
SGCE-203ENST00000425444 SSH2Q76I76 1423 aa18.33■□□□□ 0.53
SGCE-203ENST00000425444 CASZ1Q86V15 1759 aa18.33■□□□□ 0.53
SGCE-203ENST00000425444 PTGER2P43116 358 aa18.33■□□□□ 0.52
SGCE-203ENST00000425444 LARP1Q6PKG0 1096 aaKnown RBP18.33■□□□□ 0.52
SGCE-203ENST00000425444 BCL11BQ9C0K0 894 aaPredicted RBP18.33■□□□□ 0.52
SGCE-203ENST00000425444 MYOM1P52179 1685 aa18.33■□□□□ 0.52
SGCE-203ENST00000425444 MINK1Q8N4C8 1332 aaPredicted RBP18.32■□□□□ 0.52
SGCE-203ENST00000425444 PRR36Q9H6K5 1346 aa18.32■□□□□ 0.52
SGCE-203ENST00000425444 SYT17Q9BSW7 474 aa18.32■□□□□ 0.52
SGCE-203ENST00000425444 FHDC1Q9C0D6 1143 aaPredicted RBP18.32■□□□□ 0.52
SGCE-203ENST00000425444 C11orf95C9JLR9 678 aaPredicted RBP18.31■□□□□ 0.52
SGCE-203ENST00000425444 PLSCR1O15162 318 aa18.31■□□□□ 0.52
SGCE-203ENST00000425444 TRIM26Q12899 539 aaPredicted RBP18.31■□□□□ 0.52
SGCE-203ENST00000425444 NUTM2GQ5VZR2 741 aa18.31■□□□□ 0.52
SGCE-203ENST00000425444 KIAA1210Q9ULL0 1709 aa18.31■□□□□ 0.52
SGCE-203ENST00000425444 EIF3AQ14152 1382 aaKnown RBP18.3■□□□□ 0.52
SGCE-203ENST00000425444 ARHGEF28Q8N1W1 1705 aaKnown RBP18.3■□□□□ 0.52
SGCE-203ENST00000425444 NEUROD1Q13562 356 aa18.3■□□□□ 0.52
SGCE-203ENST00000425444 SIN3AQ96ST3 1273 aa18.3■□□□□ 0.52
SGCE-203ENST00000425444 GIGYF1O75420 1035 aaPredicted RBP18.29■□□□□ 0.52
SGCE-203ENST00000425444 THRAP3Q9Y2W1 955 aaKnown RBP18.28■□□□□ 0.52
SGCE-203ENST00000425444 RGPD3A6NKT7 1758 aaPredicted RBP18.27■□□□□ 0.52
SGCE-203ENST00000425444 RGPD4Q7Z3J3 1758 aa18.27■□□□□ 0.52
SGCE-203ENST00000425444 PHRF1Q9P1Y6 1649 aaKnown RBP18.27■□□□□ 0.52
SGCE-203ENST00000425444 OVOS2A0A0G2JMS6 1433 aa18.27■□□□□ 0.52
SGCE-203ENST00000425444 OVOS2A0A0J9YW53 1432 aa18.27■□□□□ 0.52
SGCE-203ENST00000425444 OVOS2Q6IE36 1432 aa18.27■□□□□ 0.52
SGCE-203ENST00000425444 L3MBTL2Q969R5 705 aa18.27■□□□□ 0.52
SGCE-203ENST00000425444 TULP4Q9NRJ4 1543 aa18.27■□□□□ 0.51
SGCE-203ENST00000425444 WASLO00401 505 aaPredicted RBP18.26■□□□□ 0.51
SGCE-203ENST00000425444 NBPF1Q3BBV0 1214 aa18.25■□□□□ 0.51
SGCE-203ENST00000425444 PARP4Q9UKK3 1724 aaKnown RBP18.24■□□□□ 0.51
SGCE-203ENST00000425444 PTF1AQ7RTS3 328 aa18.24■□□□□ 0.51
SGCE-203ENST00000425444 PROM2Q8N271 834 aa18.24■□□□□ 0.51
SGCE-203ENST00000425444 STK32BQ9NY57 414 aa18.24■□□□□ 0.51
SGCE-203ENST00000425444 SBF2Q86WG5 1849 aa18.23■□□□□ 0.51
SGCE-203ENST00000425444 ATP7BP35670 1465 aa18.22■□□□□ 0.51
SGCE-203ENST00000425444 MTFR1LQ9H019 292 aa18.22■□□□□ 0.51
SGCE-203ENST00000425444 PEAK1Q9H792 1746 aa18.21■□□□□ 0.51
SGCE-203ENST00000425444 GPR162Q16538 588 aa18.21■□□□□ 0.51
SGCE-203ENST00000425444 SLC15A2Q16348 729 aa18.2■□□□□ 0.5
SGCE-203ENST00000425444 DDB1Q16531 1140 aa18.2■□□□□ 0.5
SGCE-203ENST00000425444 ARXQ96QS3 562 aa18.2■□□□□ 0.5
SGCE-203ENST00000425444 CPDO75976 1380 aa18.19■□□□□ 0.5
SGCE-203ENST00000425444 NUDT16Q96DE0 195 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms