RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 POGKQ9P215 609 aa23.09■■□□□ 1.29
RPUSD3-204ENST00000424438 STAC3Q96MF2 364 aa23.08■■□□□ 1.29
RPUSD3-204ENST00000424438 BTG4Q9NY30 223 aa23.08■■□□□ 1.29
RPUSD3-204ENST00000424438 SPATA31A5Q5VU36 1347 aa23.08■■□□□ 1.28
RPUSD3-204ENST00000424438 SPATA31A7Q8IWB4 1347 aa23.08■■□□□ 1.28
RPUSD3-204ENST00000424438 PMFBP1Q8TBY8 1022 aa23.07■■□□□ 1.28
RPUSD3-204ENST00000424438 TNS1Q9HBL0 1735 aaKnown RBP23.06■■□□□ 1.28
RPUSD3-204ENST00000424438 FAM98CQ17RN3 349 aaKnown RBP23.06■■□□□ 1.28
RPUSD3-204ENST00000424438 SAFB2Q14151 953 aaKnown RBP eCLIP23.05■■□□□ 1.28
RPUSD3-204ENST00000424438 ITSN1Q15811 1721 aa23.05■■□□□ 1.28
RPUSD3-204ENST00000424438 PRR36Q9H6K5 1346 aa23.04■■□□□ 1.28
RPUSD3-204ENST00000424438 DCAF8L1A6NGE4 600 aa23.03■■□□□ 1.28
RPUSD3-204ENST00000424438 WASLO00401 505 aaPredicted RBP23.02■■□□□ 1.28
RPUSD3-204ENST00000424438 PARD3Q8TEW0 1356 aa23.01■■□□□ 1.27
RPUSD3-204ENST00000424438 ATP7BP35670 1465 aa23■■□□□ 1.27
RPUSD3-204ENST00000424438 TRAK1Q9UPV9 953 aa22.98■■□□□ 1.27
RPUSD3-204ENST00000424438 PHRF1Q9P1Y6 1649 aaKnown RBP22.97■■□□□ 1.27
RPUSD3-204ENST00000424438 PRDM11Q9NQV5 511 aa22.97■■□□□ 1.27
RPUSD3-204ENST00000424438 SPATA31A1Q5TZJ5 1347 aa22.97■■□□□ 1.27
RPUSD3-204ENST00000424438 ARHGEF28Q8N1W1 1705 aaKnown RBP22.96■■□□□ 1.27
RPUSD3-204ENST00000424438 EZH2Q15910 746 aaKnown RBP22.96■■□□□ 1.27
RPUSD3-204ENST00000424438 FAM182BQ5T319 152 aa22.96■■□□□ 1.27
RPUSD3-204ENST00000424438 NGDNQ8NEJ9 315 aaKnown RBP22.96■■□□□ 1.27
RPUSD3-204ENST00000424438 MINK1Q8N4C8 1332 aaPredicted RBP22.96■■□□□ 1.27
RPUSD3-204ENST00000424438 HIRIP3Q9BW71 556 aaPredicted RBP22.95■■□□□ 1.26
RPUSD3-204ENST00000424438 FAM196AQ6ZSG2 479 aa22.94■■□□□ 1.26
RPUSD3-204ENST00000424438 PPP1R1BQ9UD71 204 aaPredicted RBP22.94■■□□□ 1.26
RPUSD3-204ENST00000424438 POLR3AO14802 1390 aaPredicted RBP22.92■■□□□ 1.26
RPUSD3-204ENST00000424438 KIAA0232Q92628 1395 aa22.92■■□□□ 1.26
RPUSD3-204ENST00000424438 CAMKK2Q96RR4 588 aa22.92■■□□□ 1.26
RPUSD3-204ENST00000424438 TOPAZ1Q8N9V7 1692 aa22.92■■□□□ 1.26
RPUSD3-204ENST00000424438 RREB1Q92766 1687 aa22.92■■□□□ 1.26
RPUSD3-204ENST00000424438 BARGINQ6ZT62 677 aa22.91■■□□□ 1.26
RPUSD3-204ENST00000424438 RAB3GAP2Q9H2M9 1393 aa22.9■■□□□ 1.26
RPUSD3-204ENST00000424438 PAK3O75914 559 aaPredicted RBP22.89■■□□□ 1.25
RPUSD3-204ENST00000424438 TRIM37O94972 964 aa22.89■■□□□ 1.25
RPUSD3-204ENST00000424438 NBPF8Q3BBV2 869 aa22.89■■□□□ 1.25
RPUSD3-204ENST00000424438 NBPF14Q5TI25 921 aa22.89■■□□□ 1.25
RPUSD3-204ENST00000424438 APBA3O96018 575 aa22.88■■□□□ 1.25
RPUSD3-204ENST00000424438 NUDT16Q96DE0 195 aaKnown RBP22.88■■□□□ 1.25
RPUSD3-204ENST00000424438 CPDO75976 1380 aa22.88■■□□□ 1.25
RPUSD3-204ENST00000424438 DCAF11Q8TEB1 546 aa22.87■■□□□ 1.25
RPUSD3-204ENST00000424438 SSH2Q76I76 1423 aa22.87■■□□□ 1.25
RPUSD3-204ENST00000424438 LMO7Q8WWI1 1683 aa22.87■■□□□ 1.25
RPUSD3-204ENST00000424438 KIAA1210Q9ULL0 1709 aa22.86■■□□□ 1.25
RPUSD3-204ENST00000424438 NRKQ7Z2Y5 1582 aa22.86■■□□□ 1.25
RPUSD3-204ENST00000424438 C11orf95C9JLR9 678 aaPredicted RBP22.86■■□□□ 1.25
RPUSD3-204ENST00000424438 SPON1Q9HCB6 807 aa22.85■■□□□ 1.25
RPUSD3-204ENST00000424438 NUP188Q5SRE5 1749 aa22.85■■□□□ 1.25
RPUSD3-204ENST00000424438 PLEKHG3A1L390 1219 aa22.84■■□□□ 1.25
RPUSD3-204ENST00000424438 USP19O94966 1318 aa22.83■■□□□ 1.25
RPUSD3-204ENST00000424438 CCDC61Q9Y6R9 512 aa22.83■■□□□ 1.25
RPUSD3-204ENST00000424438 BRD4O60885 1362 aaPredicted RBP22.83■■□□□ 1.25
RPUSD3-204ENST00000424438 CAMTA1Q9Y6Y1 1673 aa22.83■■□□□ 1.24
RPUSD3-204ENST00000424438 PARP4Q9UKK3 1724 aaKnown RBP22.82■■□□□ 1.24
RPUSD3-204ENST00000424438 NINLQ9Y2I6 1382 aa22.82■■□□□ 1.24
RPUSD3-204ENST00000424438 THRAP3Q9Y2W1 955 aaKnown RBP22.82■■□□□ 1.24
RPUSD3-204ENST00000424438 RGPD3A6NKT7 1758 aaPredicted RBP22.81■■□□□ 1.24
RPUSD3-204ENST00000424438 RGPD4Q7Z3J3 1758 aa22.81■■□□□ 1.24
RPUSD3-204ENST00000424438 CHRNA2Q15822 529 aa22.81■■□□□ 1.24
RPUSD3-204ENST00000424438 KDM2AQ9Y2K7 1162 aa22.81■■□□□ 1.24
RPUSD3-204ENST00000424438 TCP11L2Q8N4U5 519 aa22.8■■□□□ 1.24
RPUSD3-204ENST00000424438 STRN4Q9NRL3 753 aa22.8■■□□□ 1.24
RPUSD3-204ENST00000424438 ACEP12821 1306 aa22.8■■□□□ 1.24
RPUSD3-204ENST00000424438 ZC3H6P61129 1189 aaKnown RBP22.79■■□□□ 1.24
RPUSD3-204ENST00000424438 PDE3BQ13370 1112 aa22.79■■□□□ 1.24
RPUSD3-204ENST00000424438 CDK19Q9BWU1 502 aa22.79■■□□□ 1.24
RPUSD3-204ENST00000424438 KCNQ2O43526 872 aa22.78■■□□□ 1.24
RPUSD3-204ENST00000424438 EVA1CP58658 441 aa22.77■■□□□ 1.24
RPUSD3-204ENST00000424438 PEAK1Q9H792 1746 aa22.74■■□□□ 1.23
RPUSD3-204ENST00000424438 COL5A2P05997 1499 aaPredicted RBP22.74■■□□□ 1.23
RPUSD3-204ENST00000424438 LARP1Q6PKG0 1096 aaKnown RBP22.74■■□□□ 1.23
RPUSD3-204ENST00000424438 NLRP13Q86W25 1043 aa22.74■■□□□ 1.23
RPUSD3-204ENST00000424438 ABTB2Q8N961 1025 aa22.73■■□□□ 1.23
RPUSD3-204ENST00000424438 SENP3-EIF4A1A0A087X0R7 540 aa22.72■■□□□ 1.23
RPUSD3-204ENST00000424438 USP35Q9P2H5 1018 aa22.72■■□□□ 1.23
RPUSD3-204ENST00000424438 CRB1P82279 1406 aa22.72■■□□□ 1.23
RPUSD3-204ENST00000424438 SBF2Q86WG5 1849 aa22.71■■□□□ 1.23
RPUSD3-204ENST00000424438 GCP02774 474 aa22.71■■□□□ 1.23
RPUSD3-204ENST00000424438 NUTM2GQ5VZR2 741 aa22.71■■□□□ 1.23
RPUSD3-204ENST00000424438 OVOS2A0A0G2JMS6 1433 aa22.71■■□□□ 1.23
RPUSD3-204ENST00000424438 OVOS2A0A0J9YW53 1432 aa22.71■■□□□ 1.23
RPUSD3-204ENST00000424438 OVOS2Q6IE36 1432 aa22.71■■□□□ 1.23
RPUSD3-204ENST00000424438 SLIT3O75094 1523 aa22.69■■□□□ 1.22
RPUSD3-204ENST00000424438 BCL9O00512 1426 aa22.69■■□□□ 1.22
RPUSD3-204ENST00000424438 AATKQ6ZMQ8 1374 aa22.69■■□□□ 1.22
RPUSD3-204ENST00000424438 ZNF784Q8NCA9 323 aaPredicted RBP22.69■■□□□ 1.22
RPUSD3-204ENST00000424438 PLSCR1O15162 318 aa22.68■■□□□ 1.22
RPUSD3-204ENST00000424438 PPIP5K1Q6PFW1 1433 aa22.67■■□□□ 1.22
RPUSD3-204ENST00000424438 LRRC37A3O60309 1634 aa22.67■■□□□ 1.22
RPUSD3-204ENST00000424438 WNK3Q9BYP7 1800 aa22.66■■□□□ 1.22
RPUSD3-204ENST00000424438 COL18A1P39060 1754 aa22.65■■□□□ 1.22
RPUSD3-204ENST00000424438 USP6P35125 1406 aa22.65■■□□□ 1.22
RPUSD3-204ENST00000424438 IFFO2Q5TF58 517 aa22.64■■□□□ 1.21
RPUSD3-204ENST00000424438 CASZ1Q86V15 1759 aa22.63■■□□□ 1.21
RPUSD3-204ENST00000424438 CENPJQ9HC77 1338 aaPredicted RBP22.62■■□□□ 1.21
RPUSD3-204ENST00000424438 CDCA7Q9BWT1 371 aaPredicted RBP22.61■■□□□ 1.21
RPUSD3-204ENST00000424438 QRICH2Q9H0J4 1663 aa22.61■■□□□ 1.21
RPUSD3-204ENST00000424438 C1QTNF8P60827 252 aa22.6■■□□□ 1.21
RPUSD3-204ENST00000424438 SRPK2P78362 688 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms