RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 CABLES1Q8TDN4 633 aa26.34■■□□□ 1.81
PRNP-202ENST00000424424 ABCA3Q99758 1704 aa26.34■■□□□ 1.81
PRNP-202ENST00000424424 ST20-MTHFSA0A0A6YYL1 179 aa26.32■■□□□ 1.8
PRNP-202ENST00000424424 USP21Q9UK80 565 aa26.32■■□□□ 1.8
PRNP-202ENST00000424424 FNBP4Q8N3X1 1017 aaPredicted RBP26.31■■□□□ 1.8
PRNP-202ENST00000424424 BRD4O60885 1362 aaPredicted RBP26.31■■□□□ 1.8
PRNP-202ENST00000424424 QTRT2Q9H974 415 aaKnown RBP26.3■■□□□ 1.8
PRNP-202ENST00000424424 USP47Q96K76 1375 aa26.3■■□□□ 1.8
PRNP-202ENST00000424424 RXRBP28702 533 aa26.28■■□□□ 1.8
PRNP-202ENST00000424424 ZNF692Q9BU19 519 aaPredicted RBP26.28■■□□□ 1.8
PRNP-202ENST00000424424 ABTB2Q8N961 1025 aa26.27■■□□□ 1.8
PRNP-202ENST00000424424 AKAP12Q02952 1782 aa26.26■■□□□ 1.79
PRNP-202ENST00000424424 PUS7Q96PZ0 661 aaKnown RBP26.26■■□□□ 1.79
PRNP-202ENST00000424424 CRYBG1Q9Y4K1 1723 aa26.25■■□□□ 1.79
PRNP-202ENST00000424424 USP6P35125 1406 aa26.25■■□□□ 1.79
PRNP-202ENST00000424424 TESK2Q96S53 571 aa26.25■■□□□ 1.79
PRNP-202ENST00000424424 TRPC5Q9UL62 973 aaPredicted RBP26.25■■□□□ 1.79
PRNP-202ENST00000424424 RBM6P78332 1123 aaKnown RBP26.23■■□□□ 1.79
PRNP-202ENST00000424424 NUTM2GQ5VZR2 741 aa26.23■■□□□ 1.79
PRNP-202ENST00000424424 TMC1Q8TDI8 760 aa26.23■■□□□ 1.79
PRNP-202ENST00000424424 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.22■■□□□ 1.79
PRNP-202ENST00000424424 NLRP13Q86W25 1043 aa26.22■■□□□ 1.79
PRNP-202ENST00000424424 PHRF1Q9P1Y6 1649 aaKnown RBP26.21■■□□□ 1.79
PRNP-202ENST00000424424 TMF1P82094 1093 aa26.21■■□□□ 1.79
PRNP-202ENST00000424424 NWD2Q9ULI1 1742 aa26.21■■□□□ 1.79
PRNP-202ENST00000424424 PLCH1Q4KWH8 1693 aa26.21■■□□□ 1.79
PRNP-202ENST00000424424 SLIT2O94813 1529 aa26.2■■□□□ 1.79
PRNP-202ENST00000424424 BCL9LQ86UU0 1499 aa26.2■■□□□ 1.78
PRNP-202ENST00000424424 UNC5CLQ8IV45 518 aa26.19■■□□□ 1.78
PRNP-202ENST00000424424 KTN1Q86UP2 1357 aaKnown RBP26.19■■□□□ 1.78
PRNP-202ENST00000424424 COL14A1Q05707 1796 aaKnown RBP26.18■■□□□ 1.78
PRNP-202ENST00000424424 ATRNO75882 1429 aa26.18■■□□□ 1.78
PRNP-202ENST00000424424 CPSF1Q10570 1443 aaKnown RBP26.18■■□□□ 1.78
PRNP-202ENST00000424424 HDGFL2Q7Z4V5 671 aaPredicted RBP26.18■■□□□ 1.78
PRNP-202ENST00000424424 CDK12Q9NYV4 1490 aaPredicted RBP26.17■■□□□ 1.78
PRNP-202ENST00000424424 MON2Q7Z3U7 1717 aa26.17■■□□□ 1.78
PRNP-202ENST00000424424 FAM83GA6ND36 823 aa26.17■■□□□ 1.78
PRNP-202ENST00000424424 SSH2Q76I76 1423 aa26.16■■□□□ 1.78
PRNP-202ENST00000424424 CDCA8Q53HL2 280 aa26.16■■□□□ 1.78
PRNP-202ENST00000424424 SLC12A5Q9H2X9 1139 aa26.16■■□□□ 1.78
PRNP-202ENST00000424424 TERF2IPQ9NYB0 399 aa26.16■■□□□ 1.78
PRNP-202ENST00000424424 TTC21AQ8NDW8 1320 aa26.15■■□□□ 1.78
PRNP-202ENST00000424424 NLRP6P59044 892 aa26.15■■□□□ 1.78
PRNP-202ENST00000424424 PRDM11Q9NQV5 511 aa26.15■■□□□ 1.78
PRNP-202ENST00000424424 NINLQ9Y2I6 1382 aa26.15■■□□□ 1.78
PRNP-202ENST00000424424 TTC21BQ7Z4L5 1316 aa26.14■■□□□ 1.78
PRNP-202ENST00000424424 USP19O94966 1318 aa26.14■■□□□ 1.77
PRNP-202ENST00000424424 NRKQ7Z2Y5 1582 aa26.13■■□□□ 1.77
PRNP-202ENST00000424424 PIK3C2AO00443 1686 aa26.12■■□□□ 1.77
PRNP-202ENST00000424424 ZC3H6P61129 1189 aaKnown RBP26.12■■□□□ 1.77
PRNP-202ENST00000424424 GJD4Q96KN9 370 aaPredicted RBP26.12■■□□□ 1.77
PRNP-202ENST00000424424 KIAA0232Q92628 1395 aa26.11■■□□□ 1.77
PRNP-202ENST00000424424 EIF4G2P78344 907 aaKnown RBP eCLIP26.11■■□□□ 1.77
PRNP-202ENST00000424424 BTG4Q9NY30 223 aa26.11■■□□□ 1.77
PRNP-202ENST00000424424 CD163L1Q9NR16 1453 aa26.11■■□□□ 1.77
PRNP-202ENST00000424424 GCP02774 474 aa26.1■■□□□ 1.77
PRNP-202ENST00000424424 NRAPQ86VF7 1730 aa26.08■■□□□ 1.77
PRNP-202ENST00000424424 VPS72Q15906 364 aa26.08■■□□□ 1.77
PRNP-202ENST00000424424 CCDC9Q9Y3X0 531 aaKnown RBP26.08■■□□□ 1.77
PRNP-202ENST00000424424 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.07■■□□□ 1.76
PRNP-202ENST00000424424 A0A1W2PP64 1363 aa26.07■■□□□ 1.76
PRNP-202ENST00000424424 RGS12O14924 1447 aa26.06■■□□□ 1.76
PRNP-202ENST00000424424 EDC4Q6P2E9 1401 aaKnown RBP26.06■■□□□ 1.76
PRNP-202ENST00000424424 SLIT3O75094 1523 aa26.06■■□□□ 1.76
PRNP-202ENST00000424424 CHRNA2Q15822 529 aa26.06■■□□□ 1.76
PRNP-202ENST00000424424 CPDO75976 1380 aa26.06■■□□□ 1.76
PRNP-202ENST00000424424 KCNH5Q8NCM2 988 aa26.05■■□□□ 1.76
PRNP-202ENST00000424424 GLI3P10071 1580 aa26.03■■□□□ 1.76
PRNP-202ENST00000424424 HSPA5P11021 654 aaKnown RBP26.02■■□□□ 1.76
PRNP-202ENST00000424424 ANKRD36BQ8N2N9 1353 aa26.02■■□□□ 1.76
PRNP-202ENST00000424424 UPF1Q92900 1129 aaKnown RBP eCLIP26.01■■□□□ 1.75
PRNP-202ENST00000424424 ZBTB7CA1YPR0 619 aa26■■□□□ 1.75
PRNP-202ENST00000424424 EVA1CP58658 441 aa26■■□□□ 1.75
PRNP-202ENST00000424424 USP54Q70EL1 1684 aa25.99■■□□□ 1.75
PRNP-202ENST00000424424 USP31Q70CQ4 1352 aa25.99■■□□□ 1.75
PRNP-202ENST00000424424 NME9Q86XW9 330 aa25.99■■□□□ 1.75
PRNP-202ENST00000424424 STRN4Q9NRL3 753 aa25.99■■□□□ 1.75
PRNP-202ENST00000424424 LMO7Q8WWI1 1683 aa25.97■■□□□ 1.75
PRNP-202ENST00000424424 SOX12O15370 315 aa25.97■■□□□ 1.75
PRNP-202ENST00000424424 CAMTA1Q9Y6Y1 1673 aa25.96■■□□□ 1.75
PRNP-202ENST00000424424 POLR3GLQ9BT43 218 aa25.95■■□□□ 1.74
PRNP-202ENST00000424424 ZRANB1Q9UGI0 708 aa25.95■■□□□ 1.74
PRNP-202ENST00000424424 MYOM1P52179 1685 aa25.95■■□□□ 1.74
PRNP-202ENST00000424424 AATKQ6ZMQ8 1374 aa25.95■■□□□ 1.74
PRNP-202ENST00000424424 SPATA31A5Q5VU36 1347 aa25.94■■□□□ 1.74
PRNP-202ENST00000424424 SPATA31A7Q8IWB4 1347 aa25.94■■□□□ 1.74
PRNP-202ENST00000424424 ONECUT3O60422 494 aaPredicted RBP25.93■■□□□ 1.74
PRNP-202ENST00000424424 ARHGEF25Q86VW2 580 aa25.93■■□□□ 1.74
PRNP-202ENST00000424424 A0A0G2JS52 829 aa25.92■■□□□ 1.74
PRNP-202ENST00000424424 MYT1Q01538 1121 aa25.92■■□□□ 1.74
PRNP-202ENST00000424424 BRWD3Q6RI45 1802 aa25.91■■□□□ 1.74
PRNP-202ENST00000424424 SEPT12Q8IYM1 358 aa25.91■■□□□ 1.74
PRNP-202ENST00000424424 NFAT5O94916 1531 aa25.91■■□□□ 1.74
PRNP-202ENST00000424424 COL18A1P39060 1754 aa25.91■■□□□ 1.74
PRNP-202ENST00000424424 FAM98CQ17RN3 349 aaKnown RBP25.9■■□□□ 1.74
PRNP-202ENST00000424424 COG3Q96JB2 828 aa25.9■■□□□ 1.74
PRNP-202ENST00000424424 SPATA31A1Q5TZJ5 1347 aa25.89■■□□□ 1.74
PRNP-202ENST00000424424 COL5A2P05997 1499 aaPredicted RBP25.89■■□□□ 1.73
PRNP-202ENST00000424424 LTN1O94822 1766 aa25.89■■□□□ 1.73
PRNP-202ENST00000424424 RGPD5Q99666 1765 aa25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms