RNA–Protein interactions for RNA: ENST00000423555.6

SMARCA2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-212ENST00000423555 CTHP32929 405 aa11.99□□□□□ -0.49
SMARCA2-212ENST00000423555 EIF4G2P78344 907 aaKnown RBP eCLIP11.99□□□□□ -0.49
SMARCA2-212ENST00000423555 SPSB2Q99619 263 aa11.99□□□□□ -0.49
SMARCA2-212ENST00000423555 PRDM9Q9NQV7 894 aa11.99□□□□□ -0.49
SMARCA2-212ENST00000423555 THSD4Q6ZMP0 1018 aa11.98□□□□□ -0.49
SMARCA2-212ENST00000423555 AEBP1Q8IUX7 1158 aa11.98□□□□□ -0.49
SMARCA2-212ENST00000423555 KRTAP3-3Q9BYR6 98 aa11.98□□□□□ -0.49
SMARCA2-212ENST00000423555 KRTAP3-2Q9BYR7 98 aa11.98□□□□□ -0.49
SMARCA2-212ENST00000423555 ZBBXA8MT70 800 aa11.97□□□□□ -0.49
SMARCA2-212ENST00000423555 MSS51Q4VC12 460 aa11.97□□□□□ -0.49
SMARCA2-212ENST00000423555 CDCA8Q53HL2 280 aa11.97□□□□□ -0.49
SMARCA2-212ENST00000423555 TBC1D9Q6ZT07 1266 aa11.97□□□□□ -0.49
SMARCA2-212ENST00000423555 TLL1O43897 1013 aa11.95□□□□□ -0.5
SMARCA2-212ENST00000423555 DXOO77932 396 aaKnown RBP11.95□□□□□ -0.5
SMARCA2-212ENST00000423555 KCTD12Q96CX2 325 aaKnown RBP11.95□□□□□ -0.5
SMARCA2-212ENST00000423555 CCNYL3P0C7X3 344 aa11.94□□□□□ -0.5
SMARCA2-212ENST00000423555 NUDT12Q9BQG2 462 aa11.94□□□□□ -0.5
SMARCA2-212ENST00000423555 EVA1BQ9NVM1 165 aa11.94□□□□□ -0.5
SMARCA2-212ENST00000423555 MAFBQ9Y5Q3 323 aaPredicted RBP11.94□□□□□ -0.5
SMARCA2-212ENST00000423555 CARNS1A5YM72 827 aa11.93□□□□□ -0.5
SMARCA2-212ENST00000423555 PIK3CDO00329 1044 aa11.92□□□□□ -0.5
SMARCA2-212ENST00000423555 MMP16P51512 607 aa11.92□□□□□ -0.5
SMARCA2-212ENST00000423555 KCNH2Q12809 1159 aa11.92□□□□□ -0.5
SMARCA2-212ENST00000423555 KCTD17Q8N5Z5 321 aa11.92□□□□□ -0.5
SMARCA2-212ENST00000423555 ZC3H4Q9UPT8 1303 aaKnown RBP11.91□□□□□ -0.5
SMARCA2-212ENST00000423555 ATP9BO43861 1147 aa11.9□□□□□ -0.5
SMARCA2-212ENST00000423555 ZPR1O75312 459 aa11.9□□□□□ -0.5
SMARCA2-212ENST00000423555 POTEMA6NI47 508 aa11.89□□□□□ -0.51
SMARCA2-212ENST00000423555 CSB-PGBD3P0DP91 1061 aa11.89□□□□□ -0.51
SMARCA2-212ENST00000423555 MTRQ99707 1265 aa11.89□□□□□ -0.51
SMARCA2-212ENST00000423555 OCSTAMPQ9BR26 566 aa11.89□□□□□ -0.51
SMARCA2-212ENST00000423555 ADH1BP00325 375 aa11.88□□□□□ -0.51
SMARCA2-212ENST00000423555 PTPN5P54829 565 aa11.86□□□□□ -0.51
SMARCA2-212ENST00000423555 PTK2Q05397 1052 aa11.86□□□□□ -0.51
SMARCA2-212ENST00000423555 PDXDC2PQ6P474 469 aa11.86□□□□□ -0.51
SMARCA2-212ENST00000423555 CCDC24Q8N4L8 307 aa11.86□□□□□ -0.51
SMARCA2-212ENST00000423555 ZNF516Q92618 1163 aa11.86□□□□□ -0.51
SMARCA2-212ENST00000423555 PTCRAQ6ISU1 281 aaPredicted RBP11.85□□□□□ -0.51
SMARCA2-212ENST00000423555 ARMC2Q8NEN0 867 aa11.85□□□□□ -0.51
SMARCA2-212ENST00000423555 FAM174AQ8TBP5 190 aa11.85□□□□□ -0.51
SMARCA2-212ENST00000423555 ATG7O95352 703 aa11.84□□□□□ -0.51
SMARCA2-212ENST00000423555 SKIP12755 728 aa11.84□□□□□ -0.51
SMARCA2-212ENST00000423555 PDE4CQ08493 712 aa11.84□□□□□ -0.51
SMARCA2-212ENST00000423555 KANK4Q5T7N3 995 aaPredicted RBP11.84□□□□□ -0.51
SMARCA2-212ENST00000423555 USTQ9Y2C2 406 aa11.84□□□□□ -0.51
SMARCA2-212ENST00000423555 GPSM3Q9Y4H4 160 aa11.84□□□□□ -0.51
SMARCA2-212ENST00000423555 PCDHB9Q9Y5E1 797 aa11.84□□□□□ -0.51
SMARCA2-212ENST00000423555 TJAP1Q5JTD0 557 aa11.83□□□□□ -0.52
SMARCA2-212ENST00000423555 NYAP1Q6ZVC0 841 aa11.83□□□□□ -0.52
SMARCA2-212ENST00000423555 GPKOWQ92917 476 aaPredicted RBP eCLIP11.83□□□□□ -0.52
SMARCA2-212ENST00000423555 UNC93B1Q9H1C4 597 aa11.83□□□□□ -0.52
SMARCA2-212ENST00000423555 VRTNQ9H8Y1 702 aa11.83□□□□□ -0.52
SMARCA2-212ENST00000423555 CEP126Q9P2H0 1117 aa11.83□□□□□ -0.52
SMARCA2-212ENST00000423555 NBPF14Q5TI25 921 aa11.82□□□□□ -0.52
SMARCA2-212ENST00000423555 DEPDC4Q8N2C3 294 aa11.82□□□□□ -0.52
SMARCA2-212ENST00000423555 USP17L3A6NCW0 530 aa11.81□□□□□ -0.52
SMARCA2-212ENST00000423555 USP17L4A6NCW7 530 aa11.81□□□□□ -0.52
SMARCA2-212ENST00000423555 USP17L2Q6R6M4 530 aa11.81□□□□□ -0.52
SMARCA2-212ENST00000423555 USP17L1Q7RTZ2 530 aa11.81□□□□□ -0.52
SMARCA2-212ENST00000423555 ADAM32Q8TC27 787 aa11.81□□□□□ -0.52
SMARCA2-212ENST00000423555 ARHGAP9Q9BRR9 750 aa11.81□□□□□ -0.52
SMARCA2-212ENST00000423555 SLC6A16Q9GZN6 736 aa11.81□□□□□ -0.52
SMARCA2-212ENST00000423555 USP17L5A8MUK1 530 aa11.8□□□□□ -0.52
SMARCA2-212ENST00000423555 NFATC2IPQ8NCF5 419 aa11.8□□□□□ -0.52
SMARCA2-212ENST00000423555 IL21Q9HBE4 155 aa11.8□□□□□ -0.52
SMARCA2-212ENST00000423555 CCDC9Q9Y3X0 531 aaKnown RBP11.8□□□□□ -0.52
SMARCA2-212ENST00000423555 TMEM88BA6NKF7 163 aa11.79□□□□□ -0.52
SMARCA2-212ENST00000423555 NKX2-3Q8TAU0 364 aa11.79□□□□□ -0.52
SMARCA2-212ENST00000423555 GZF1Q9H116 711 aaPredicted RBP11.79□□□□□ -0.52
SMARCA2-212ENST00000423555 SLFNL1Q499Z3 407 aa11.78□□□□□ -0.52
SMARCA2-212ENST00000423555 PHTF2Q8N3S3 785 aa11.78□□□□□ -0.52
SMARCA2-212ENST00000423555 SH3BP5LQ7L8J4 393 aa11.77□□□□□ -0.53
SMARCA2-212ENST00000423555 ZBTB33Q86T24 672 aa11.77□□□□□ -0.53
SMARCA2-212ENST00000423555 PLEKHM2Q8IWE5 1019 aa11.77□□□□□ -0.53
SMARCA2-212ENST00000423555 BRD1O95696 1058 aa11.76□□□□□ -0.53
SMARCA2-212ENST00000423555 S1PR4O95977 384 aa11.76□□□□□ -0.53
SMARCA2-212ENST00000423555 RNF135Q8IUD6 432 aa11.76□□□□□ -0.53
SMARCA2-212ENST00000423555 BAP1Q92560 729 aa11.76□□□□□ -0.53
SMARCA2-212ENST00000423555 CARD14Q9BXL6 1004 aa11.76□□□□□ -0.53
SMARCA2-212ENST00000423555 MYT1LQ9UL68 1186 aa11.76□□□□□ -0.53
SMARCA2-212ENST00000423555 ZMIZ1Q9ULJ6 1067 aa11.76□□□□□ -0.53
SMARCA2-212ENST00000423555 LINC01559Q495D7 138 aa11.75□□□□□ -0.53
SMARCA2-212ENST00000423555 MAGEB6P1A0A0J9YX57 407 aa11.74□□□□□ -0.53
SMARCA2-212ENST00000423555 NCOA4Q13772 614 aa11.74□□□□□ -0.53
SMARCA2-212ENST00000423555 TSGA10IPQ3SY00 556 aa11.74□□□□□ -0.53
SMARCA2-212ENST00000423555 STK32AQ8WU08 396 aa11.74□□□□□ -0.53
SMARCA2-212ENST00000423555 MKRN1Q9UHC7 482 aaKnown RBP11.74□□□□□ -0.53
SMARCA2-212ENST00000423555 MCCD1P59942 119 aaPredicted RBP11.73□□□□□ -0.53
SMARCA2-212ENST00000423555 TMEM164Q5U3C3 297 aa11.73□□□□□ -0.53
SMARCA2-212ENST00000423555 SH3RF1Q7Z6J0 888 aa11.73□□□□□ -0.53
SMARCA2-212ENST00000423555 PLPP7Q8NBV4 271 aa11.73□□□□□ -0.53
SMARCA2-212ENST00000423555 FOXJ1Q92949 421 aa11.73□□□□□ -0.53
SMARCA2-212ENST00000423555 NOVA2Q9UNW9 492 aaKnown RBP11.73□□□□□ -0.53
SMARCA2-212ENST00000423555 FCF1Q9Y324 198 aaKnown RBP11.73□□□□□ -0.53
SMARCA2-212ENST00000423555 CRTC2Q53ET0 693 aaPredicted RBP11.72□□□□□ -0.53
SMARCA2-212ENST00000423555 DZIP3Q86Y13 1208 aaKnown RBP11.72□□□□□ -0.53
SMARCA2-212ENST00000423555 CDAN1Q8IWY9 1227 aa11.72□□□□□ -0.53
SMARCA2-212ENST00000423555 ZNF592Q92610 1267 aa11.72□□□□□ -0.53
SMARCA2-212ENST00000423555 KCNA1Q09470 495 aa11.71□□□□□ -0.53
SMARCA2-212ENST00000423555 ELOAQ14241 798 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms