RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 COL14A1Q05707 1796 aaKnown RBP8.79□□□□□ -1
HDAC8-212ENST00000421523 KIF1AQ12756 1690 aa8.79□□□□□ -1
HDAC8-212ENST00000421523 PRELPP51888 382 aa8.79□□□□□ -1
HDAC8-212ENST00000421523 TNS4Q8IZW8 715 aa8.78□□□□□ -1
HDAC8-212ENST00000421523 KLHL34Q8N239 644 aa8.78□□□□□ -1
HDAC8-212ENST00000421523 ATP10DQ9P241 1426 aa8.78□□□□□ -1
HDAC8-212ENST00000421523 PDE3BQ13370 1112 aa8.77□□□□□ -1.01
HDAC8-212ENST00000421523 ZNF526Q8TF50 670 aaPredicted RBP8.77□□□□□ -1.01
HDAC8-212ENST00000421523 BCL11BQ9C0K0 894 aaPredicted RBP8.77□□□□□ -1.01
HDAC8-212ENST00000421523 USP35Q9P2H5 1018 aa8.77□□□□□ -1.01
HDAC8-212ENST00000421523 RRBP1Q9P2E9 1410 aaKnown RBP8.77□□□□□ -1.01
HDAC8-212ENST00000421523 ANKRD50Q9ULJ7 1429 aa8.77□□□□□ -1.01
HDAC8-212ENST00000421523 ARHGEF10O15013 1369 aa8.76□□□□□ -1.01
HDAC8-212ENST00000421523 GPBP1L1Q9HC44 474 aaPredicted RBP8.76□□□□□ -1.01
HDAC8-212ENST00000421523 TECPR2O15040 1411 aa8.76□□□□□ -1.01
HDAC8-212ENST00000421523 SPATA31A1Q5TZJ5 1347 aa8.76□□□□□ -1.01
HDAC8-212ENST00000421523 PRAG1Q86YV5 1406 aa8.75□□□□□ -1.01
HDAC8-212ENST00000421523 PSME1Q06323 249 aa8.75□□□□□ -1.01
HDAC8-212ENST00000421523 ARXQ96QS3 562 aa8.75□□□□□ -1.01
HDAC8-212ENST00000421523 STRN4Q9NRL3 753 aa8.75□□□□□ -1.01
HDAC8-212ENST00000421523 FMN2Q9NZ56 1722 aa8.74□□□□□ -1.01
HDAC8-212ENST00000421523 RGPD3A6NKT7 1758 aaPredicted RBP8.74□□□□□ -1.01
HDAC8-212ENST00000421523 RGPD4Q7Z3J3 1758 aa8.74□□□□□ -1.01
HDAC8-212ENST00000421523 MTFR1LQ9H019 292 aa8.74□□□□□ -1.01
HDAC8-212ENST00000421523 MAPK8IP2Q13387 824 aaPredicted RBP8.73□□□□□ -1.01
HDAC8-212ENST00000421523 SGIP1Q9BQI5 828 aa8.73□□□□□ -1.01
HDAC8-212ENST00000421523 PRDM11Q9NQV5 511 aa8.73□□□□□ -1.01
HDAC8-212ENST00000421523 RGPD8O14715 1765 aaPredicted RBP8.73□□□□□ -1.01
HDAC8-212ENST00000421523 SBNO1A3KN83 1393 aa8.73□□□□□ -1.01
HDAC8-212ENST00000421523 MAP3K5Q99683 1374 aa8.73□□□□□ -1.01
HDAC8-212ENST00000421523 WAPLQ7Z5K2 1190 aa8.72□□□□□ -1.01
HDAC8-212ENST00000421523 STK32BQ9NY57 414 aa8.72□□□□□ -1.01
HDAC8-212ENST00000421523 STK26Q9P289 416 aa8.72□□□□□ -1.01
HDAC8-212ENST00000421523 PHF8Q9UPP1 1060 aa8.72□□□□□ -1.01
HDAC8-212ENST00000421523 APLP1P51693 650 aa8.71□□□□□ -1.02
HDAC8-212ENST00000421523 PCDH10Q9P2E7 1040 aa8.71□□□□□ -1.02
HDAC8-212ENST00000421523 CHRNA2Q15822 529 aa8.7□□□□□ -1.02
HDAC8-212ENST00000421523 PTF1AQ7RTS3 328 aa8.7□□□□□ -1.02
HDAC8-212ENST00000421523 PLEKHH1Q9ULM0 1364 aa8.7□□□□□ -1.02
HDAC8-212ENST00000421523 NRXN1Q9ULB1 1477 aa8.7□□□□□ -1.02
HDAC8-212ENST00000421523 CLTCL1P53675 1640 aa8.69□□□□□ -1.02
HDAC8-212ENST00000421523 IFT172Q9UG01 1749 aa8.69□□□□□ -1.02
HDAC8-212ENST00000421523 YBX3P16989 372 aaKnown RBP eCLIP8.69□□□□□ -1.02
HDAC8-212ENST00000421523 SLC15A2Q16348 729 aa8.69□□□□□ -1.02
HDAC8-212ENST00000421523 DNAJC5GQ8N7S2 189 aa8.69□□□□□ -1.02
HDAC8-212ENST00000421523 NLGN2Q8NFZ4 835 aa8.69□□□□□ -1.02
HDAC8-212ENST00000421523 PLSCR1O15162 318 aa8.68□□□□□ -1.02
HDAC8-212ENST00000421523 APLP2Q06481 763 aa8.68□□□□□ -1.02
HDAC8-212ENST00000421523 PROM2Q8N271 834 aa8.68□□□□□ -1.02
HDAC8-212ENST00000421523 PMFBP1Q8TBY8 1022 aa8.68□□□□□ -1.02
HDAC8-212ENST00000421523 NUP155O75694 1391 aa8.68□□□□□ -1.02
HDAC8-212ENST00000421523 KIAA0232Q92628 1395 aa8.68□□□□□ -1.02
HDAC8-212ENST00000421523 OVOS2A0A0G2JMS6 1433 aa8.68□□□□□ -1.02
HDAC8-212ENST00000421523 OVOS2A0A0J9YW53 1432 aa8.68□□□□□ -1.02
HDAC8-212ENST00000421523 OVOS2Q6IE36 1432 aa8.68□□□□□ -1.02
HDAC8-212ENST00000421523 TRPM3Q9HCF6 1732 aaPredicted RBP8.68□□□□□ -1.02
HDAC8-212ENST00000421523 BARGINQ6ZT62 677 aa8.67□□□□□ -1.02
HDAC8-212ENST00000421523 SBF2Q86WG5 1849 aa8.67□□□□□ -1.02
HDAC8-212ENST00000421523 ALS2Q96Q42 1657 aa8.67□□□□□ -1.02
HDAC8-212ENST00000421523 WWC3Q9ULE0 1092 aa8.67□□□□□ -1.02
HDAC8-212ENST00000421523 CRYBG1Q9Y4K1 1723 aa8.67□□□□□ -1.02
HDAC8-212ENST00000421523 PEAK1Q9H792 1746 aa8.66□□□□□ -1.02
HDAC8-212ENST00000421523 SSH2Q76I76 1423 aa8.66□□□□□ -1.02
HDAC8-212ENST00000421523 VGFO15240 615 aaPredicted RBP8.66□□□□□ -1.02
HDAC8-212ENST00000421523 EVA1CP58658 441 aa8.66□□□□□ -1.02
HDAC8-212ENST00000421523 HTRA3P83110 453 aa8.66□□□□□ -1.02
HDAC8-212ENST00000421523 KIF1BO60333 1816 aa8.66□□□□□ -1.02
HDAC8-212ENST00000421523 GRIN3BO60391 1043 aa8.65□□□□□ -1.02
HDAC8-212ENST00000421523 TXNRD1Q16881 649 aa8.65□□□□□ -1.02
HDAC8-212ENST00000421523 LARP1Q6PKG0 1096 aaKnown RBP8.65□□□□□ -1.02
HDAC8-212ENST00000421523 TCP11L2Q8N4U5 519 aa8.65□□□□□ -1.02
HDAC8-212ENST00000421523 WDR90Q96KV7 1748 aa8.65□□□□□ -1.03
HDAC8-212ENST00000421523 PARP4Q9UKK3 1724 aaKnown RBP8.65□□□□□ -1.03
HDAC8-212ENST00000421523 TOPAZ1Q8N9V7 1692 aa8.65□□□□□ -1.03
HDAC8-212ENST00000421523 ADCY9O60503 1353 aa8.64□□□□□ -1.03
HDAC8-212ENST00000421523 FAM50AQ14320 339 aaKnown RBP8.64□□□□□ -1.03
HDAC8-212ENST00000421523 LRRC37A3O60309 1634 aa8.63□□□□□ -1.03
HDAC8-212ENST00000421523 KIF3CO14782 793 aa8.63□□□□□ -1.03
HDAC8-212ENST00000421523 PAK3O75914 559 aaPredicted RBP8.63□□□□□ -1.03
HDAC8-212ENST00000421523 ZC3H6P61129 1189 aaKnown RBP8.63□□□□□ -1.03
HDAC8-212ENST00000421523 KLRG1Q96E93 195 aa8.63□□□□□ -1.03
HDAC8-212ENST00000421523 GPRASP1Q5JY77 1395 aa8.62□□□□□ -1.03
HDAC8-212ENST00000421523 PHRF1Q9P1Y6 1649 aaKnown RBP8.62□□□□□ -1.03
HDAC8-212ENST00000421523 C11orf95C9JLR9 678 aaPredicted RBP8.62□□□□□ -1.03
HDAC8-212ENST00000421523 POLD1P28340 1107 aa8.62□□□□□ -1.03
HDAC8-212ENST00000421523 KNDC1Q76NI1 1749 aa8.62□□□□□ -1.03
HDAC8-212ENST00000421523 ATP7BP35670 1465 aa8.62□□□□□ -1.03
HDAC8-212ENST00000421523 ROCK1Q13464 1354 aa8.61□□□□□ -1.03
HDAC8-212ENST00000421523 DHX57Q6P158 1386 aaKnown RBP8.61□□□□□ -1.03
HDAC8-212ENST00000421523 PPLO60437 1756 aa8.61□□□□□ -1.03
HDAC8-212ENST00000421523 SAFB2Q14151 953 aaKnown RBP eCLIP8.61□□□□□ -1.03
HDAC8-212ENST00000421523 TMEM132EQ6IEE7 984 aa8.61□□□□□ -1.03
HDAC8-212ENST00000421523 ZNF827Q17R98 1081 aa8.6□□□□□ -1.03
HDAC8-212ENST00000421523 NUTM2GQ5VZR2 741 aa8.6□□□□□ -1.03
HDAC8-212ENST00000421523 JMYQ8N9B5 988 aa8.6□□□□□ -1.03
HDAC8-212ENST00000421523 AATKQ6ZMQ8 1374 aa8.6□□□□□ -1.03
HDAC8-212ENST00000421523 ACIN1Q9UKV3 1341 aaKnown RBP8.59□□□□□ -1.03
HDAC8-212ENST00000421523 PAPPAQ13219 1627 aa8.59□□□□□ -1.03
HDAC8-212ENST00000421523 DDB1Q16531 1140 aa8.59□□□□□ -1.03
HDAC8-212ENST00000421523 TNS2Q63HR2 1409 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms