RNA–Protein interactions for RNA: ENST00000420881.6

PCDH19-203, Transcript of protocadherin 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH19, Length 7,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-203ENST00000420881 DESP17661 470 aa10.96□□□□□ -0.66
PCDH19-203ENST00000420881 IMMTQ16891 758 aaKnown RBP10.96□□□□□ -0.66
PCDH19-203ENST00000420881 ERC2O15083 957 aa10.95□□□□□ -0.66
PCDH19-203ENST00000420881 BRPF1P55201 1214 aaPredicted RBP10.95□□□□□ -0.66
PCDH19-203ENST00000420881 WWC2Q6AWC2 1192 aa10.95□□□□□ -0.66
PCDH19-203ENST00000420881 NGEFQ8N5V2 710 aa10.95□□□□□ -0.66
PCDH19-203ENST00000420881 RBM28Q9NW13 759 aaKnown RBP10.95□□□□□ -0.66
PCDH19-203ENST00000420881 FHAD1B1AJZ9 1412 aa10.95□□□□□ -0.66
PCDH19-203ENST00000420881 CEP164Q9UPV0 1460 aa10.95□□□□□ -0.66
PCDH19-203ENST00000420881 DYNC1I1O14576 645 aa10.95□□□□□ -0.66
PCDH19-203ENST00000420881 IFIT2P09913 472 aaKnown RBP10.95□□□□□ -0.66
PCDH19-203ENST00000420881 RALYLQ86SE5 291 aaKnown RBP10.95□□□□□ -0.66
PCDH19-203ENST00000420881 DHX16O60231 1041 aaKnown RBP10.95□□□□□ -0.66
PCDH19-203ENST00000420881 SOX12O15370 315 aa10.94□□□□□ -0.66
PCDH19-203ENST00000420881 PDIA4P13667 645 aaKnown RBP10.94□□□□□ -0.66
PCDH19-203ENST00000420881 TNMDQ9H2S6 317 aa10.94□□□□□ -0.66
PCDH19-203ENST00000420881 MYBBP1AQ9BQG0 1328 aaKnown RBP10.94□□□□□ -0.66
PCDH19-203ENST00000420881 SARNPP82979 210 aaKnown RBP10.94□□□□□ -0.66
PCDH19-203ENST00000420881 CASQ1P31415 396 aa10.94□□□□□ -0.66
PCDH19-203ENST00000420881 PAF1Q8N7H5 531 aa10.94□□□□□ -0.66
PCDH19-203ENST00000420881 HSPA4P34932 840 aa10.94□□□□□ -0.66
PCDH19-203ENST00000420881 PTPN14Q15678 1187 aa10.94□□□□□ -0.66
PCDH19-203ENST00000420881 NBPF1Q3BBV0 1214 aa10.94□□□□□ -0.66
PCDH19-203ENST00000420881 ZSCAN12O43309 604 aa10.94□□□□□ -0.66
PCDH19-203ENST00000420881 CDK5RAP3Q96JB5 506 aa10.94□□□□□ -0.66
PCDH19-203ENST00000420881 SUDS3Q9H7L9 328 aaPredicted RBP10.93□□□□□ -0.66
PCDH19-203ENST00000420881 PRPF40AO75400 957 aaKnown RBP10.93□□□□□ -0.66
PCDH19-203ENST00000420881 FAM177A1Q8N128 213 aaPredicted RBP10.93□□□□□ -0.66
PCDH19-203ENST00000420881 ZNF526Q8TF50 670 aaPredicted RBP10.93□□□□□ -0.66
PCDH19-203ENST00000420881 EPB41L2O43491 1005 aaKnown RBP10.93□□□□□ -0.66
PCDH19-203ENST00000420881 ZNF397Q8NF99 534 aaPredicted RBP10.93□□□□□ -0.66
PCDH19-203ENST00000420881 NAP1L3Q99457 506 aaPredicted RBP10.93□□□□□ -0.66
PCDH19-203ENST00000420881 GOLGA6L9A6NEM1 432 aa10.93□□□□□ -0.66
PCDH19-203ENST00000420881 ZHX1Q9UKY1 873 aaPredicted RBP10.93□□□□□ -0.66
PCDH19-203ENST00000420881 SMTNL1A8MU46 457 aa10.93□□□□□ -0.66
PCDH19-203ENST00000420881 TAF4BQ92750 862 aa10.92□□□□□ -0.66
PCDH19-203ENST00000420881 TERF2IPQ9NYB0 399 aa10.92□□□□□ -0.66
PCDH19-203ENST00000420881 FMNL2Q96PY5 1086 aa10.92□□□□□ -0.66
PCDH19-203ENST00000420881 ZWINTO95229 277 aa10.92□□□□□ -0.66
PCDH19-203ENST00000420881 IFFO1Q0D2I5 559 aa10.92□□□□□ -0.66
PCDH19-203ENST00000420881 HSP90AB4PQ58FF6 505 aa10.92□□□□□ -0.66
PCDH19-203ENST00000420881 CEP83Q9Y592 693 aa10.91□□□□□ -0.66
PCDH19-203ENST00000420881 ARHGAP29Q52LW3 1261 aa10.91□□□□□ -0.66
PCDH19-203ENST00000420881 EXOC6Q8TAG9 804 aa10.91□□□□□ -0.66
PCDH19-203ENST00000420881 GTPBP4Q9BZE4 634 aaKnown RBP10.91□□□□□ -0.66
PCDH19-203ENST00000420881 KIF5CO60282 957 aa10.91□□□□□ -0.66
PCDH19-203ENST00000420881 CDC45O75419 566 aa10.91□□□□□ -0.66
PCDH19-203ENST00000420881 GTF2F1P35269 517 aaKnown RBP eCLIP10.91□□□□□ -0.66
PCDH19-203ENST00000420881 CETN2P41208 172 aa10.91□□□□□ -0.66
PCDH19-203ENST00000420881 ZFYP08048 801 aaPredicted RBP10.91□□□□□ -0.66
PCDH19-203ENST00000420881 CCDC83Q8IWF9 413 aa10.9□□□□□ -0.66
PCDH19-203ENST00000420881 NOL3O60936 208 aaKnown RBP10.9□□□□□ -0.66
PCDH19-203ENST00000420881 IBSPP21815 317 aaPredicted RBP10.9□□□□□ -0.66
PCDH19-203ENST00000420881 TTC31Q49AM3 519 aaPredicted RBP10.9□□□□□ -0.66
PCDH19-203ENST00000420881 PPP4R3BQ5MIZ7 849 aa10.9□□□□□ -0.66
PCDH19-203ENST00000420881 DZIP1LQ8IYY4 767 aaKnown RBP10.9□□□□□ -0.66
PCDH19-203ENST00000420881 SMARCC1Q92922 1105 aaPredicted RBP10.9□□□□□ -0.66
PCDH19-203ENST00000420881 C9orf78Q9NZ63 289 aaPredicted RBP10.9□□□□□ -0.66
PCDH19-203ENST00000420881 TNIKQ9UKE5 1360 aa10.9□□□□□ -0.66
PCDH19-203ENST00000420881 WDR33Q9C0J8 1336 aaKnown RBP10.9□□□□□ -0.66
PCDH19-203ENST00000420881 SART3Q15020 963 aaKnown RBP10.9□□□□□ -0.66
PCDH19-203ENST00000420881 TAOK3Q9H2K8 898 aa10.9□□□□□ -0.66
PCDH19-203ENST00000420881 ARHGAP35Q9NRY4 1499 aa10.9□□□□□ -0.66
PCDH19-203ENST00000420881 TCHPQ9BT92 498 aa10.9□□□□□ -0.67
PCDH19-203ENST00000420881 CCDC113Q9H0I3 377 aa10.9□□□□□ -0.67
PCDH19-203ENST00000420881 CCDC160A6NGH7 325 aa10.89□□□□□ -0.67
PCDH19-203ENST00000420881 MCM5P33992 734 aa10.89□□□□□ -0.67
PCDH19-203ENST00000420881 GRIPAP1Q4V328 841 aa10.89□□□□□ -0.67
PCDH19-203ENST00000420881 ANKS4BQ8N8V4 417 aa10.89□□□□□ -0.67
PCDH19-203ENST00000420881 SCRIBQ14160 1630 aa10.89□□□□□ -0.67
PCDH19-203ENST00000420881 HIP1O00291 1037 aa10.89□□□□□ -0.67
PCDH19-203ENST00000420881 GTF2E1P29083 439 aaPredicted RBP10.89□□□□□ -0.67
PCDH19-203ENST00000420881 MYO15BQ96JP2 1530 aa10.89□□□□□ -0.67
PCDH19-203ENST00000420881 LIG1P18858 919 aa10.89□□□□□ -0.67
PCDH19-203ENST00000420881 ANKRD1Q15327 319 aa10.89□□□□□ -0.67
PCDH19-203ENST00000420881 CCDC6Q16204 474 aa10.89□□□□□ -0.67
PCDH19-203ENST00000420881 CCDC27Q2M243 656 aa10.88□□□□□ -0.67
PCDH19-203ENST00000420881 CNTROBQ8N137 903 aa10.88□□□□□ -0.67
PCDH19-203ENST00000420881 RSRC1Q96IZ7 334 aaKnown RBP10.88□□□□□ -0.67
PCDH19-203ENST00000420881 NAA15Q9BXJ9 866 aaKnown RBP10.88□□□□□ -0.67
PCDH19-203ENST00000420881 FOSBP53539 338 aa10.88□□□□□ -0.67
PCDH19-203ENST00000420881 KRT85P78386 507 aa10.88□□□□□ -0.67
PCDH19-203ENST00000420881 RAD21O60216 631 aa10.88□□□□□ -0.67
PCDH19-203ENST00000420881 CHMP7Q8WUX9 453 aaPredicted RBP10.88□□□□□ -0.67
PCDH19-203ENST00000420881 LMAN1P49257 510 aa10.87□□□□□ -0.67
PCDH19-203ENST00000420881 VPS37DQ86XT2 251 aa10.87□□□□□ -0.67
PCDH19-203ENST00000420881 CEP57L1Q8IYX8 460 aa10.87□□□□□ -0.67
PCDH19-203ENST00000420881 KRT222Q8N1A0 295 aa10.87□□□□□ -0.67
PCDH19-203ENST00000420881 FAM184BQ9ULE4 1060 aa10.87□□□□□ -0.67
PCDH19-203ENST00000420881 G3BP1Q13283 466 aaKnown RBP eCLIP10.87□□□□□ -0.67
PCDH19-203ENST00000420881 STK38Q15208 465 aa10.87□□□□□ -0.67
PCDH19-203ENST00000420881 RNF168Q8IYW5 571 aaPredicted RBP10.87□□□□□ -0.67
PCDH19-203ENST00000420881 CIZ1Q9ULV3 898 aaPredicted RBP10.87□□□□□ -0.67
PCDH19-203ENST00000420881 COG6Q9Y2V7 657 aa10.87□□□□□ -0.67
PCDH19-203ENST00000420881 KIF5BP33176 963 aa10.87□□□□□ -0.67
PCDH19-203ENST00000420881 DNAJC21Q5F1R6 531 aaKnown RBP10.87□□□□□ -0.67
PCDH19-203ENST00000420881 NEMFO60524 1076 aa10.87□□□□□ -0.67
PCDH19-203ENST00000420881 CSB-PGBD3P0DP91 1061 aa10.87□□□□□ -0.67
PCDH19-203ENST00000420881 MSL1Q68DK7 614 aa10.87□□□□□ -0.67
PCDH19-203ENST00000420881 MIPOL1Q8TD10 442 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms