RNA–Protein interactions for RNA: ENST00000416585.1

SNX30-202, Transcript of sorting nexin family member 30, humanhuman

TSL 3

Gene SNX30, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-202ENST00000416585 PAK3O75914 559 aaPredicted RBP16.52■□□□□ 0.24
SNX30-202ENST00000416585 TOPAZ1Q8N9V7 1692 aa16.52■□□□□ 0.23
SNX30-202ENST00000416585 RGPD1P0DJD0 1748 aa16.51■□□□□ 0.23
SNX30-202ENST00000416585 SEPT12Q8IYM1 358 aa16.5■□□□□ 0.23
SNX30-202ENST00000416585 ATP7BP35670 1465 aa16.48■□□□□ 0.23
SNX30-202ENST00000416585 PRR36Q9H6K5 1346 aa16.48■□□□□ 0.23
SNX30-202ENST00000416585 QRICH2Q9H0J4 1663 aa16.48■□□□□ 0.23
SNX30-202ENST00000416585 FAM83GA6ND36 823 aa16.47■□□□□ 0.23
SNX30-202ENST00000416585 KRT27Q7Z3Y8 459 aa16.47■□□□□ 0.23
SNX30-202ENST00000416585 BTG4Q9NY30 223 aa16.47■□□□□ 0.23
SNX30-202ENST00000416585 EP400Q96L91 3159 aa16.45■□□□□ 0.22
SNX30-202ENST00000416585 NUDT16Q96DE0 195 aaKnown RBP16.45■□□□□ 0.22
SNX30-202ENST00000416585 PRDM11Q9NQV5 511 aa16.45■□□□□ 0.22
SNX30-202ENST00000416585 FAM98CQ17RN3 349 aaKnown RBP16.43■□□□□ 0.22
SNX30-202ENST00000416585 ONECUT3O60422 494 aaPredicted RBP16.42■□□□□ 0.22
SNX30-202ENST00000416585 BAG6P46379 1132 aa16.42■□□□□ 0.22
SNX30-202ENST00000416585 CDK19Q9BWU1 502 aa16.42■□□□□ 0.22
SNX30-202ENST00000416585 THSD7AQ9UPZ6 1657 aa16.42■□□□□ 0.22
SNX30-202ENST00000416585 DEFB132Q7Z7B7 95 aa16.41■□□□□ 0.22
SNX30-202ENST00000416585 TNS1Q9HBL0 1735 aaKnown RBP16.4■□□□□ 0.22
SNX30-202ENST00000416585 NRKQ7Z2Y5 1582 aa16.39■□□□□ 0.21
SNX30-202ENST00000416585 CCDC61Q9Y6R9 512 aa16.39■□□□□ 0.21
SNX30-202ENST00000416585 ACEP12821 1306 aa16.39■□□□□ 0.21
SNX30-202ENST00000416585 SPATA31A5Q5VU36 1347 aa16.39■□□□□ 0.21
SNX30-202ENST00000416585 SPATA31A7Q8IWB4 1347 aa16.39■□□□□ 0.21
SNX30-202ENST00000416585 KIAA0232Q92628 1395 aa16.38■□□□□ 0.21
SNX30-202ENST00000416585 SRPK2P78362 688 aaKnown RBP16.38■□□□□ 0.21
SNX30-202ENST00000416585 STRN4Q9NRL3 753 aa16.38■□□□□ 0.21
SNX30-202ENST00000416585 POLR3AO14802 1390 aaPredicted RBP16.38■□□□□ 0.21
SNX30-202ENST00000416585 NUTM2GQ5VZR2 741 aa16.37■□□□□ 0.21
SNX30-202ENST00000416585 CENPJQ9HC77 1338 aaPredicted RBP16.37■□□□□ 0.21
SNX30-202ENST00000416585 LRP5O75197 1615 aa16.37■□□□□ 0.21
SNX30-202ENST00000416585 TRPM1Q7Z4N2 1603 aa16.37■□□□□ 0.21
SNX30-202ENST00000416585 PPIP5K1Q6PFW1 1433 aa16.36■□□□□ 0.21
SNX30-202ENST00000416585 EVA1CP58658 441 aa16.36■□□□□ 0.21
SNX30-202ENST00000416585 ABTB2Q8N961 1025 aa16.36■□□□□ 0.21
SNX30-202ENST00000416585 ZC3H6P61129 1189 aaKnown RBP16.35■□□□□ 0.21
SNX30-202ENST00000416585 CHRNA2Q15822 529 aa16.35■□□□□ 0.21
SNX30-202ENST00000416585 NBPF8Q3BBV2 869 aa16.35■□□□□ 0.21
SNX30-202ENST00000416585 NBPF1Q3BBV0 1214 aa16.34■□□□□ 0.21
SNX30-202ENST00000416585 LMO7Q8WWI1 1683 aa16.34■□□□□ 0.21
SNX30-202ENST00000416585 AKAP12Q02952 1782 aa16.33■□□□□ 0.21
SNX30-202ENST00000416585 PLEKHG3A1L390 1219 aa16.33■□□□□ 0.2
SNX30-202ENST00000416585 SPATA31A1Q5TZJ5 1347 aa16.33■□□□□ 0.2
SNX30-202ENST00000416585 NLRP13Q86W25 1043 aa16.32■□□□□ 0.2
SNX30-202ENST00000416585 WNK3Q9BYP7 1800 aa16.32■□□□□ 0.2
SNX30-202ENST00000416585 USP35Q9P2H5 1018 aa16.32■□□□□ 0.2
SNX30-202ENST00000416585 PARP4Q9UKK3 1724 aaKnown RBP16.31■□□□□ 0.2
SNX30-202ENST00000416585 SSH2Q76I76 1423 aa16.31■□□□□ 0.2
SNX30-202ENST00000416585 BRD4O60885 1362 aaPredicted RBP16.31■□□□□ 0.2
SNX30-202ENST00000416585 FAM182BQ5T319 152 aa16.31■□□□□ 0.2
SNX30-202ENST00000416585 RGPD5Q99666 1765 aa16.31■□□□□ 0.2
SNX30-202ENST00000416585 CABP2Q9NPB3 220 aa16.3■□□□□ 0.2
SNX30-202ENST00000416585 ZBTB7CA1YPR0 619 aa16.29■□□□□ 0.2
SNX30-202ENST00000416585 PDE3BQ13370 1112 aa16.29■□□□□ 0.2
SNX30-202ENST00000416585 FAM196AQ6ZSG2 479 aa16.29■□□□□ 0.2
SNX30-202ENST00000416585 CAMTA1Q9Y6Y1 1673 aa16.29■□□□□ 0.2
SNX30-202ENST00000416585 CPDO75976 1380 aa16.28■□□□□ 0.2
SNX30-202ENST00000416585 PIK3C2AO00443 1686 aa16.28■□□□□ 0.2
SNX30-202ENST00000416585 RREB1Q92766 1687 aa16.28■□□□□ 0.2
SNX30-202ENST00000416585 EVC2Q86UK5 1308 aa16.28■□□□□ 0.2
SNX30-202ENST00000416585 PSDA5PKW4 1024 aaPredicted RBP16.28■□□□□ 0.2
SNX30-202ENST00000416585 EN1Q05925 392 aaPredicted RBP16.28■□□□□ 0.2
SNX30-202ENST00000416585 USP19O94966 1318 aa16.27■□□□□ 0.2
SNX30-202ENST00000416585 SBF2Q86WG5 1849 aa16.27■□□□□ 0.2
SNX30-202ENST00000416585 DISP2A7MBM2 1401 aa16.27■□□□□ 0.19
SNX30-202ENST00000416585 USP6P35125 1406 aa16.27■□□□□ 0.19
SNX30-202ENST00000416585 ROCK2O75116 1388 aaKnown RBP16.26■□□□□ 0.19
SNX30-202ENST00000416585 NUP188Q5SRE5 1749 aa16.26■□□□□ 0.19
SNX30-202ENST00000416585 BARGINQ6ZT62 677 aa16.26■□□□□ 0.19
SNX30-202ENST00000416585 TRIM37O94972 964 aa16.25■□□□□ 0.19
SNX30-202ENST00000416585 GCP02774 474 aa16.25■□□□□ 0.19
SNX30-202ENST00000416585 NLRP6P59044 892 aa16.25■□□□□ 0.19
SNX30-202ENST00000416585 TCP11L2Q8N4U5 519 aa16.25■□□□□ 0.19
SNX30-202ENST00000416585 L3MBTL2Q969R5 705 aa16.25■□□□□ 0.19
SNX30-202ENST00000416585 THRAP3Q9Y2W1 955 aaKnown RBP16.25■□□□□ 0.19
SNX30-202ENST00000416585 MON2Q7Z3U7 1717 aa16.25■□□□□ 0.19
SNX30-202ENST00000416585 SLIT3O75094 1523 aa16.24■□□□□ 0.19
SNX30-202ENST00000416585 COL5A2P05997 1499 aaPredicted RBP16.24■□□□□ 0.19
SNX30-202ENST00000416585 NEUROD1Q13562 356 aa16.24■□□□□ 0.19
SNX30-202ENST00000416585 LARP1Q6PKG0 1096 aaKnown RBP16.24■□□□□ 0.19
SNX30-202ENST00000416585 CABP1Q9NZU7 370 aa16.24■□□□□ 0.19
SNX30-202ENST00000416585 PARD3Q8TEW0 1356 aa16.24■□□□□ 0.19
SNX30-202ENST00000416585 CRB1P82279 1406 aa16.23■□□□□ 0.19
SNX30-202ENST00000416585 APBA3O96018 575 aa16.23■□□□□ 0.19
SNX30-202ENST00000416585 COL18A1P39060 1754 aa16.23■□□□□ 0.19
SNX30-202ENST00000416585 LRRC37A3O60309 1634 aa16.23■□□□□ 0.19
SNX30-202ENST00000416585 EZH2Q15910 746 aaKnown RBP16.22■□□□□ 0.19
SNX30-202ENST00000416585 RGPD3A6NKT7 1758 aaPredicted RBP16.22■□□□□ 0.19
SNX30-202ENST00000416585 LTN1O94822 1766 aa16.22■□□□□ 0.19
SNX30-202ENST00000416585 RGPD4Q7Z3J3 1758 aa16.22■□□□□ 0.19
SNX30-202ENST00000416585 C11orf95C9JLR9 678 aaPredicted RBP16.21■□□□□ 0.19
SNX30-202ENST00000416585 R3HDM1Q15032 1099 aaKnown RBP16.21■□□□□ 0.19
SNX30-202ENST00000416585 SIN3AQ96ST3 1273 aa16.21■□□□□ 0.19
SNX30-202ENST00000416585 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
SNX30-202ENST00000416585 KAT6BQ8WYB5 2073 aa16.19■□□□□ 0.18
SNX30-202ENST00000416585 AATKQ6ZMQ8 1374 aa16.19■□□□□ 0.18
SNX30-202ENST00000416585 TOM1L2Q6ZVM7 507 aa16.19■□□□□ 0.18
SNX30-202ENST00000416585 OVOS2A0A0G2JMS6 1433 aa16.19■□□□□ 0.18
SNX30-202ENST00000416585 OVOS2A0A0J9YW53 1432 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms