RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 MINK1Q8N4C8 1332 aaPredicted RBP14.77□□□□□ -0.04
MDC1-202ENST00000416571 ADGRB1O14514 1584 aa14.77□□□□□ -0.05
MDC1-202ENST00000416571 PSDA5PKW4 1024 aaPredicted RBP14.76□□□□□ -0.05
MDC1-202ENST00000416571 PAK3O75914 559 aaPredicted RBP14.76□□□□□ -0.05
MDC1-202ENST00000416571 NGDNQ8NEJ9 315 aaKnown RBP14.76□□□□□ -0.05
MDC1-202ENST00000416571 ITSN1Q15811 1721 aa14.75□□□□□ -0.05
MDC1-202ENST00000416571 WASLO00401 505 aaPredicted RBP14.74□□□□□ -0.05
MDC1-202ENST00000416571 PRDM11Q9NQV5 511 aa14.74□□□□□ -0.05
MDC1-202ENST00000416571 KDM2AQ9Y2K7 1162 aa14.74□□□□□ -0.05
MDC1-202ENST00000416571 PRR36Q9H6K5 1346 aa14.73□□□□□ -0.05
MDC1-202ENST00000416571 CRYBG1Q9Y4K1 1723 aa14.73□□□□□ -0.05
MDC1-202ENST00000416571 DCAF11Q8TEB1 546 aa14.73□□□□□ -0.05
MDC1-202ENST00000416571 SPATA31A5Q5VU36 1347 aa14.72□□□□□ -0.05
MDC1-202ENST00000416571 SPATA31A7Q8IWB4 1347 aa14.72□□□□□ -0.05
MDC1-202ENST00000416571 EN1Q05925 392 aaPredicted RBP14.72□□□□□ -0.05
MDC1-202ENST00000416571 RAB3GAP2Q9H2M9 1393 aa14.72□□□□□ -0.05
MDC1-202ENST00000416571 HRCP23327 699 aa14.71□□□□□ -0.05
MDC1-202ENST00000416571 FAM182BQ5T319 152 aa14.71□□□□□ -0.05
MDC1-202ENST00000416571 THSD7AQ9UPZ6 1657 aa14.71□□□□□ -0.06
MDC1-202ENST00000416571 SENP3-EIF4A1A0A087X0R7 540 aa14.7□□□□□ -0.06
MDC1-202ENST00000416571 ARHGEF28Q8N1W1 1705 aaKnown RBP14.69□□□□□ -0.06
MDC1-202ENST00000416571 TNS1Q9HBL0 1735 aaKnown RBP14.69□□□□□ -0.06
MDC1-202ENST00000416571 STAC3Q96MF2 364 aa14.69□□□□□ -0.06
MDC1-202ENST00000416571 PHRF1Q9P1Y6 1649 aaKnown RBP14.69□□□□□ -0.06
MDC1-202ENST00000416571 R3HDM1Q15032 1099 aaKnown RBP14.68□□□□□ -0.06
MDC1-202ENST00000416571 STRN4Q9NRL3 753 aa14.68□□□□□ -0.06
MDC1-202ENST00000416571 KIAA0232Q92628 1395 aa14.68□□□□□ -0.06
MDC1-202ENST00000416571 ATP7BP35670 1465 aa14.68□□□□□ -0.06
MDC1-202ENST00000416571 DISP2A7MBM2 1401 aa14.67□□□□□ -0.06
MDC1-202ENST00000416571 CHRNA2Q15822 529 aa14.67□□□□□ -0.06
MDC1-202ENST00000416571 NUDT16Q96DE0 195 aaKnown RBP14.67□□□□□ -0.06
MDC1-202ENST00000416571 SPATA31A1Q5TZJ5 1347 aa14.66□□□□□ -0.06
MDC1-202ENST00000416571 FAM196AQ6ZSG2 479 aa14.66□□□□□ -0.06
MDC1-202ENST00000416571 EVA1CP58658 441 aa14.65□□□□□ -0.06
MDC1-202ENST00000416571 ZC3H6P61129 1189 aaKnown RBP14.65□□□□□ -0.06
MDC1-202ENST00000416571 EZH2Q15910 746 aaKnown RBP14.65□□□□□ -0.06
MDC1-202ENST00000416571 USP35Q9P2H5 1018 aa14.65□□□□□ -0.06
MDC1-202ENST00000416571 TRIM37O94972 964 aa14.64□□□□□ -0.07
MDC1-202ENST00000416571 PDE3BQ13370 1112 aa14.64□□□□□ -0.07
MDC1-202ENST00000416571 NUTM2GQ5VZR2 741 aa14.64□□□□□ -0.07
MDC1-202ENST00000416571 TOPAZ1Q8N9V7 1692 aa14.63□□□□□ -0.07
MDC1-202ENST00000416571 APBA3O96018 575 aa14.63□□□□□ -0.07
MDC1-202ENST00000416571 CDK19Q9BWU1 502 aa14.63□□□□□ -0.07
MDC1-202ENST00000416571 PARD3Q8TEW0 1356 aa14.62□□□□□ -0.07
MDC1-202ENST00000416571 ACEP12821 1306 aa14.62□□□□□ -0.07
MDC1-202ENST00000416571 SSH2Q76I76 1423 aa14.61□□□□□ -0.07
MDC1-202ENST00000416571 ABTB2Q8N961 1025 aa14.61□□□□□ -0.07
MDC1-202ENST00000416571 CAMKK2Q96RR4 588 aa14.61□□□□□ -0.07
MDC1-202ENST00000416571 POLR3AO14802 1390 aaPredicted RBP14.6□□□□□ -0.07
MDC1-202ENST00000416571 NRKQ7Z2Y5 1582 aa14.6□□□□□ -0.07
MDC1-202ENST00000416571 NBPF8Q3BBV2 869 aa14.6□□□□□ -0.07
MDC1-202ENST00000416571 BARGINQ6ZT62 677 aa14.6□□□□□ -0.07
MDC1-202ENST00000416571 CCDC61Q9Y6R9 512 aa14.6□□□□□ -0.07
MDC1-202ENST00000416571 RREB1Q92766 1687 aa14.59□□□□□ -0.07
MDC1-202ENST00000416571 NBPF14Q5TI25 921 aa14.59□□□□□ -0.07
MDC1-202ENST00000416571 KIAA1210Q9ULL0 1709 aa14.58□□□□□ -0.07
MDC1-202ENST00000416571 TCP11L2Q8N4U5 519 aa14.58□□□□□ -0.08
MDC1-202ENST00000416571 CAMTA1Q9Y6Y1 1673 aa14.58□□□□□ -0.08
MDC1-202ENST00000416571 PLEKHG3A1L390 1219 aa14.57□□□□□ -0.08
MDC1-202ENST00000416571 LARP1Q6PKG0 1096 aaKnown RBP14.57□□□□□ -0.08
MDC1-202ENST00000416571 NLRP13Q86W25 1043 aa14.57□□□□□ -0.08
MDC1-202ENST00000416571 NUP188Q5SRE5 1749 aa14.57□□□□□ -0.08
MDC1-202ENST00000416571 CPDO75976 1380 aa14.57□□□□□ -0.08
MDC1-202ENST00000416571 LMO7Q8WWI1 1683 aa14.56□□□□□ -0.08
MDC1-202ENST00000416571 SRPK2P78362 688 aaKnown RBP14.56□□□□□ -0.08
MDC1-202ENST00000416571 THRAP3Q9Y2W1 955 aaKnown RBP14.56□□□□□ -0.08
MDC1-202ENST00000416571 CEP350Q5VT06 3117 aa14.55□□□□□ -0.08
MDC1-202ENST00000416571 PPIP5K1Q6PFW1 1433 aa14.55□□□□□ -0.08
MDC1-202ENST00000416571 PARP4Q9UKK3 1724 aaKnown RBP14.55□□□□□ -0.08
MDC1-202ENST00000416571 ZBTB7CA1YPR0 619 aa14.54□□□□□ -0.08
MDC1-202ENST00000416571 C11orf95C9JLR9 678 aaPredicted RBP14.54□□□□□ -0.08
MDC1-202ENST00000416571 USP19O94966 1318 aa14.54□□□□□ -0.08
MDC1-202ENST00000416571 GCP02774 474 aa14.53□□□□□ -0.08
MDC1-202ENST00000416571 PPP1R1BQ9UD71 204 aaPredicted RBP14.53□□□□□ -0.08
MDC1-202ENST00000416571 COL5A2P05997 1499 aaPredicted RBP14.52□□□□□ -0.08
MDC1-202ENST00000416571 CRB1P82279 1406 aa14.52□□□□□ -0.08
MDC1-202ENST00000416571 CENPJQ9HC77 1338 aaPredicted RBP14.52□□□□□ -0.08
MDC1-202ENST00000416571 OVOS2A0A0G2JMS6 1433 aa14.51□□□□□ -0.09
MDC1-202ENST00000416571 OVOS2A0A0J9YW53 1432 aa14.51□□□□□ -0.09
MDC1-202ENST00000416571 OVOS2Q6IE36 1432 aa14.51□□□□□ -0.09
MDC1-202ENST00000416571 BRD4O60885 1362 aaPredicted RBP14.51□□□□□ -0.09
MDC1-202ENST00000416571 DCAF8L1A6NGE4 600 aa14.51□□□□□ -0.09
MDC1-202ENST00000416571 QRICH2Q9H0J4 1663 aa14.51□□□□□ -0.09
MDC1-202ENST00000416571 NBPF1Q3BBV0 1214 aa14.5□□□□□ -0.09
MDC1-202ENST00000416571 SPON1Q9HCB6 807 aa14.5□□□□□ -0.09
MDC1-202ENST00000416571 CABP2Q9NPB3 220 aa14.5□□□□□ -0.09
MDC1-202ENST00000416571 LRRC37A3O60309 1634 aa14.49□□□□□ -0.09
MDC1-202ENST00000416571 NLRP6P59044 892 aa14.49□□□□□ -0.09
MDC1-202ENST00000416571 C1QTNF8P60827 252 aa14.49□□□□□ -0.09
MDC1-202ENST00000416571 RGPD3A6NKT7 1758 aaPredicted RBP14.49□□□□□ -0.09
MDC1-202ENST00000416571 RGPD4Q7Z3J3 1758 aa14.49□□□□□ -0.09
MDC1-202ENST00000416571 KCNQ2O43526 872 aa14.48□□□□□ -0.09
MDC1-202ENST00000416571 DDB1Q16531 1140 aa14.48□□□□□ -0.09
MDC1-202ENST00000416571 TOM1L2Q6ZVM7 507 aa14.48□□□□□ -0.09
MDC1-202ENST00000416571 ZNF784Q8NCA9 323 aaPredicted RBP14.48□□□□□ -0.09
MDC1-202ENST00000416571 USP6P35125 1406 aa14.48□□□□□ -0.09
MDC1-202ENST00000416571 AATKQ6ZMQ8 1374 aa14.47□□□□□ -0.09
MDC1-202ENST00000416571 CABP1Q9NZU7 370 aa14.47□□□□□ -0.09
MDC1-202ENST00000416571 SBF2Q86WG5 1849 aa14.47□□□□□ -0.09
MDC1-202ENST00000416571 PEAK1Q9H792 1746 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms