RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 RAD21O60216 631 aa10.35□□□□□ -0.75
EPHA4-204ENST00000415749 THAP11Q96EK4 314 aa10.35□□□□□ -0.75
EPHA4-204ENST00000415749 MTRQ99707 1265 aa10.35□□□□□ -0.75
EPHA4-204ENST00000415749 IL21Q9HBE4 155 aa10.35□□□□□ -0.75
EPHA4-204ENST00000415749 TDRD9Q8NDG6 1382 aaKnown RBP10.35□□□□□ -0.75
EPHA4-204ENST00000415749 NPM2Q86SE8 214 aaKnown RBP10.34□□□□□ -0.75
EPHA4-204ENST00000415749 SNRKQ9NRH2 765 aa10.34□□□□□ -0.75
EPHA4-204ENST00000415749 CCDC88BA6NC98 1476 aa10.34□□□□□ -0.75
EPHA4-204ENST00000415749 TARBP1Q13395 1621 aaKnown RBP10.33□□□□□ -0.76
EPHA4-204ENST00000415749 ZPR1O75312 459 aa10.33□□□□□ -0.76
EPHA4-204ENST00000415749 SPSB2Q99619 263 aa10.33□□□□□ -0.76
EPHA4-204ENST00000415749 PRDM2Q13029 1718 aa10.33□□□□□ -0.76
EPHA4-204ENST00000415749 DNMBPQ6XZF7 1577 aa10.32□□□□□ -0.76
EPHA4-204ENST00000415749 CTDSPL2Q05D32 466 aa10.32□□□□□ -0.76
EPHA4-204ENST00000415749 MSS51Q4VC12 460 aa10.32□□□□□ -0.76
EPHA4-204ENST00000415749 SOGA1O94964 1423 aa10.32□□□□□ -0.76
EPHA4-204ENST00000415749 ADH1BP00325 375 aa10.31□□□□□ -0.76
EPHA4-204ENST00000415749 MTMR14Q8NCE2 650 aa10.31□□□□□ -0.76
EPHA4-204ENST00000415749 RAD54L2Q9Y4B4 1467 aa10.3□□□□□ -0.76
EPHA4-204ENST00000415749 CLASP1Q7Z460 1538 aa10.3□□□□□ -0.76
EPHA4-204ENST00000415749 JUNDP17535 347 aa10.3□□□□□ -0.76
EPHA4-204ENST00000415749 TJAP1Q5JTD0 557 aa10.3□□□□□ -0.76
EPHA4-204ENST00000415749 C1orf115Q9H7X2 142 aa10.3□□□□□ -0.76
EPHA4-204ENST00000415749 POLA1P09884 1462 aaPredicted RBP10.3□□□□□ -0.76
EPHA4-204ENST00000415749 A6NJR5 290 aa10.29□□□□□ -0.76
EPHA4-204ENST00000415749 GAPVD1Q14C86 1478 aa10.29□□□□□ -0.76
EPHA4-204ENST00000415749 SNAPC4Q5SXM2 1469 aa10.29□□□□□ -0.76
EPHA4-204ENST00000415749 SYNJ1O43426 1573 aa10.28□□□□□ -0.76
EPHA4-204ENST00000415749 LYPD8Q6UX82 237 aa10.28□□□□□ -0.76
EPHA4-204ENST00000415749 WWC1Q8IX03 1113 aa10.28□□□□□ -0.76
EPHA4-204ENST00000415749 PNMA1Q8ND90 353 aa10.27□□□□□ -0.77
EPHA4-204ENST00000415749 TLL1O43897 1013 aa10.26□□□□□ -0.77
EPHA4-204ENST00000415749 PTPRNQ16849 979 aa10.26□□□□□ -0.77
EPHA4-204ENST00000415749 LRRN4Q8WUT4 740 aa10.26□□□□□ -0.77
EPHA4-204ENST00000415749 CLUAP1Q96AJ1 413 aa10.26□□□□□ -0.77
EPHA4-204ENST00000415749 NDUFB9Q9Y6M9 179 aa10.26□□□□□ -0.77
EPHA4-204ENST00000415749 ARID3CA6NKF2 412 aa10.25□□□□□ -0.77
EPHA4-204ENST00000415749 DXOO77932 396 aaKnown RBP10.25□□□□□ -0.77
EPHA4-204ENST00000415749 FAM160A2Q8N612 972 aaPredicted RBP10.25□□□□□ -0.77
EPHA4-204ENST00000415749 ZNF516Q92618 1163 aa10.25□□□□□ -0.77
EPHA4-204ENST00000415749 COG6Q9Y2V7 657 aa10.25□□□□□ -0.77
EPHA4-204ENST00000415749 MMP16P51512 607 aa10.24□□□□□ -0.77
EPHA4-204ENST00000415749 KCNC4Q03721 635 aa10.24□□□□□ -0.77
EPHA4-204ENST00000415749 SLC6A16Q9GZN6 736 aa10.24□□□□□ -0.77
EPHA4-204ENST00000415749 HMX1Q9NP08 348 aaPredicted RBP10.24□□□□□ -0.77
EPHA4-204ENST00000415749 MAGI1Q96QZ7 1491 aaPredicted RBP10.23□□□□□ -0.77
EPHA4-204ENST00000415749 PER1O15534 1290 aaPredicted RBP10.23□□□□□ -0.77
EPHA4-204ENST00000415749 PROSER2Q86WR7 435 aaPredicted RBP10.23□□□□□ -0.77
EPHA4-204ENST00000415749 POM121Q96HA1 1249 aa10.23□□□□□ -0.77
EPHA4-204ENST00000415749 GJD4Q96KN9 370 aaPredicted RBP10.23□□□□□ -0.77
EPHA4-204ENST00000415749 ITGBL1O95965 494 aaPredicted RBP10.22□□□□□ -0.77
EPHA4-204ENST00000415749 NUDT12Q9BQG2 462 aa10.22□□□□□ -0.77
EPHA4-204ENST00000415749 GDPD2Q9HCC8 539 aa10.22□□□□□ -0.77
EPHA4-204ENST00000415749 SYNJ2O15056 1496 aa10.22□□□□□ -0.77
EPHA4-204ENST00000415749 GRIN2BQ13224 1484 aa10.22□□□□□ -0.77
EPHA4-204ENST00000415749 CCNYL3P0C7X3 344 aa10.21□□□□□ -0.77
EPHA4-204ENST00000415749 MMRN1Q13201 1228 aa10.21□□□□□ -0.77
EPHA4-204ENST00000415749 PRDM9Q9NQV7 894 aa10.21□□□□□ -0.77
EPHA4-204ENST00000415749 ABL2P42684 1182 aa10.2□□□□□ -0.78
EPHA4-204ENST00000415749 NR6A1Q15406 480 aa10.2□□□□□ -0.78
EPHA4-204ENST00000415749 TRIM34Q9BYJ4 488 aa10.2□□□□□ -0.78
EPHA4-204ENST00000415749 TBC1D2BQ9UPU7 963 aa10.2□□□□□ -0.78
EPHA4-204ENST00000415749 TRAK2O60296 914 aa10.19□□□□□ -0.78
EPHA4-204ENST00000415749 CTHP32929 405 aa10.19□□□□□ -0.78
EPHA4-204ENST00000415749 F12P00748 615 aaPredicted RBP10.18□□□□□ -0.78
EPHA4-204ENST00000415749 GGCXP38435 758 aa10.18□□□□□ -0.78
EPHA4-204ENST00000415749 EVA1BQ9NVM1 165 aa10.18□□□□□ -0.78
EPHA4-204ENST00000415749 FGD5Q6ZNL6 1462 aa10.17□□□□□ -0.78
EPHA4-204ENST00000415749 S1PR4O95977 384 aa10.17□□□□□ -0.78
EPHA4-204ENST00000415749 FAM69CQ0P6D2 419 aa10.17□□□□□ -0.78
EPHA4-204ENST00000415749 KCNH2Q12809 1159 aa10.17□□□□□ -0.78
EPHA4-204ENST00000415749 ARMC2Q8NEN0 867 aa10.17□□□□□ -0.78
EPHA4-204ENST00000415749 NKX2-3Q8TAU0 364 aa10.17□□□□□ -0.78
EPHA4-204ENST00000415749 WDR97A6NE52 1622 aa10.17□□□□□ -0.78
EPHA4-204ENST00000415749 ZC3H4Q9UPT8 1303 aaKnown RBP10.16□□□□□ -0.78
EPHA4-204ENST00000415749 PDIA4P13667 645 aaKnown RBP10.16□□□□□ -0.78
EPHA4-204ENST00000415749 WASHC4Q2M389 1173 aa10.16□□□□□ -0.78
EPHA4-204ENST00000415749 FNBP4Q8N3X1 1017 aaPredicted RBP10.16□□□□□ -0.78
EPHA4-204ENST00000415749 CCDC24Q8N4L8 307 aa10.16□□□□□ -0.78
EPHA4-204ENST00000415749 ZBTB7CA1YPR0 619 aa10.15□□□□□ -0.78
EPHA4-204ENST00000415749 EPS8L1Q8TE68 723 aa10.15□□□□□ -0.78
EPHA4-204ENST00000415749 MAP10Q9P2G4 905 aa10.15□□□□□ -0.78
EPHA4-204ENST00000415749 ZNF330Q9Y3S2 320 aaPredicted RBP10.15□□□□□ -0.78
EPHA4-204ENST00000415749 ERCC6L2Q5T890 1561 aa10.14□□□□□ -0.79
EPHA4-204ENST00000415749 FKBPLQ9UIM3 349 aa10.14□□□□□ -0.79
EPHA4-204ENST00000415749 NBPF14Q5TI25 921 aa10.12□□□□□ -0.79
EPHA4-204ENST00000415749 GPKOWQ92917 476 aaPredicted RBP eCLIP10.12□□□□□ -0.79
EPHA4-204ENST00000415749 FCF1Q9Y324 198 aaKnown RBP10.12□□□□□ -0.79
EPHA4-204ENST00000415749 IRF5Q13568 498 aa10.1□□□□□ -0.79
EPHA4-204ENST00000415749 UNC93B1Q9H1C4 597 aa10.1□□□□□ -0.79
EPHA4-204ENST00000415749 CCDC9Q9Y3X0 531 aaKnown RBP10.1□□□□□ -0.79
EPHA4-204ENST00000415749 CUX1P39880 1505 aa10.1□□□□□ -0.79
EPHA4-204ENST00000415749 KIF13AQ9H1H9 1805 aa10.1□□□□□ -0.79
EPHA4-204ENST00000415749 ANKLE1Q8NAG6 615 aa10.09□□□□□ -0.79
EPHA4-204ENST00000415749 CEP170Q5SW79 1584 aa10.09□□□□□ -0.79
EPHA4-204ENST00000415749 GPR37L1O60883 481 aa10.08□□□□□ -0.8
EPHA4-204ENST00000415749 IFFO2Q5TF58 517 aa10.08□□□□□ -0.8
EPHA4-204ENST00000415749 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.08□□□□□ -0.8
EPHA4-204ENST00000415749 ZNF777Q9ULD5 760 aaPredicted RBP10.08□□□□□ -0.8
EPHA4-204ENST00000415749 GPSM3Q9Y4H4 160 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms