RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 MAGI2Q86UL8 1455 aa17.19■□□□□ 0.34
LINC00887-202ENST00000414120 INO80Q9ULG1 1556 aaPredicted RBP17.19■□□□□ 0.34
LINC00887-202ENST00000414120 ABCA6Q8N139 1617 aa17.19■□□□□ 0.34
LINC00887-202ENST00000414120 CROCC2H7BZ55 1655 aa17.19■□□□□ 0.34
LINC00887-202ENST00000414120 KIF1CO43896 1103 aaKnown RBP17.19■□□□□ 0.34
LINC00887-202ENST00000414120 CFAP44Q96MT7 982 aa17.19■□□□□ 0.34
LINC00887-202ENST00000414120 RAB3GAP2Q9H2M9 1393 aa17.19■□□□□ 0.34
LINC00887-202ENST00000414120 ZMYM4Q5VZL5 1548 aa17.19■□□□□ 0.34
LINC00887-202ENST00000414120 SETD5Q9C0A6 1442 aa17.18■□□□□ 0.34
LINC00887-202ENST00000414120 SSR1P43307 286 aaKnown RBP17.18■□□□□ 0.34
LINC00887-202ENST00000414120 SEMA3FQ13275 785 aa17.18■□□□□ 0.34
LINC00887-202ENST00000414120 FAM161AQ3B820 660 aa17.18■□□□□ 0.34
LINC00887-202ENST00000414120 DIP2CQ9Y2E4 1556 aa17.18■□□□□ 0.34
LINC00887-202ENST00000414120 PRR29P0C7W0 189 aa17.18■□□□□ 0.34
LINC00887-202ENST00000414120 HFM1A2PYH4 1435 aa17.17■□□□□ 0.34
LINC00887-202ENST00000414120 PRIMPOLQ96LW4 560 aa17.17■□□□□ 0.34
LINC00887-202ENST00000414120 ANTXR1Q9H6X2 564 aa17.17■□□□□ 0.34
LINC00887-202ENST00000414120 KIF16BQ96L93 1317 aa17.17■□□□□ 0.34
LINC00887-202ENST00000414120 GOLIM4O00461 696 aa17.17■□□□□ 0.34
LINC00887-202ENST00000414120 ZKSCAN8Q15776 578 aaPredicted RBP17.17■□□□□ 0.34
LINC00887-202ENST00000414120 SIRT1Q96EB6 747 aa17.17■□□□□ 0.34
LINC00887-202ENST00000414120 ADGRL2O95490 1459 aa17.17■□□□□ 0.34
LINC00887-202ENST00000414120 IBTKQ9P2D0 1353 aaPredicted RBP17.16■□□□□ 0.34
LINC00887-202ENST00000414120 MCM4P33991 863 aa17.16■□□□□ 0.34
LINC00887-202ENST00000414120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.16■□□□□ 0.34
LINC00887-202ENST00000414120 OTUD6BQ8N6M0 293 aa17.16■□□□□ 0.34
LINC00887-202ENST00000414120 HMGN5P82970 282 aaKnown RBP17.16■□□□□ 0.34
LINC00887-202ENST00000414120 TERF2IPQ9NYB0 399 aa17.16■□□□□ 0.34
LINC00887-202ENST00000414120 ARHGEF40Q8TER5 1519 aa17.16■□□□□ 0.34
LINC00887-202ENST00000414120 RBM25P49756 843 aaKnown RBP17.15■□□□□ 0.34
LINC00887-202ENST00000414120 ATP2B3Q16720 1220 aa17.14■□□□□ 0.34
LINC00887-202ENST00000414120 NUP155O75694 1391 aa17.14■□□□□ 0.34
LINC00887-202ENST00000414120 MAST1Q9Y2H9 1570 aa17.14■□□□□ 0.33
LINC00887-202ENST00000414120 CHMP4CQ96CF2 233 aa17.14■□□□□ 0.33
LINC00887-202ENST00000414120 DUOX2Q9NRD8 1548 aa17.14■□□□□ 0.33
LINC00887-202ENST00000414120 CT47A1Q5JQC4 288 aaPredicted RBP17.14■□□□□ 0.33
LINC00887-202ENST00000414120 CASC1Q6TDU7 716 aa17.14■□□□□ 0.33
LINC00887-202ENST00000414120 NBPF6Q5VWK0 638 aa17.13■□□□□ 0.33
LINC00887-202ENST00000414120 NBPF5PQ86XG9 351 aaPredicted RBP17.13■□□□□ 0.33
LINC00887-202ENST00000414120 NBPF4Q96M43 638 aa17.13■□□□□ 0.33
LINC00887-202ENST00000414120 ADGBQ8N7X0 1667 aa17.13■□□□□ 0.33
LINC00887-202ENST00000414120 TRAK2O60296 914 aa17.13■□□□□ 0.33
LINC00887-202ENST00000414120 DONSONQ9NYP3 566 aa17.13■□□□□ 0.33
LINC00887-202ENST00000414120 DDX11L8A8MPP1 907 aa17.12■□□□□ 0.33
LINC00887-202ENST00000414120 CCDC144AA2RUR9 1427 aa17.12■□□□□ 0.33
LINC00887-202ENST00000414120 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.12■□□□□ 0.33
LINC00887-202ENST00000414120 MNS1Q8NEH6 495 aa17.12■□□□□ 0.33
LINC00887-202ENST00000414120 SLC4A1APQ9BWU0 796 aaKnown RBP17.11■□□□□ 0.33
LINC00887-202ENST00000414120 OGFRQ9NZT2 677 aa17.11■□□□□ 0.33
LINC00887-202ENST00000414120 PLXNC1O60486 1568 aa17.11■□□□□ 0.33
LINC00887-202ENST00000414120 NOP2P46087 812 aaKnown RBP17.11■□□□□ 0.33
LINC00887-202ENST00000414120 GTF2A1P52655 376 aaPredicted RBP17.11■□□□□ 0.33
LINC00887-202ENST00000414120 FEZ2Q9UHY8 353 aaPredicted RBP17.11■□□□□ 0.33
LINC00887-202ENST00000414120 ERBINQ96RT1 1412 aa17.09■□□□□ 0.33
LINC00887-202ENST00000414120 CALRP27797 417 aaKnown RBP17.09■□□□□ 0.33
LINC00887-202ENST00000414120 SLC26A8Q96RN1 970 aa17.09■□□□□ 0.33
LINC00887-202ENST00000414120 ZNF710Q8N1W2 664 aa17.08■□□□□ 0.32
LINC00887-202ENST00000414120 KANK1Q14678 1352 aa17.08■□□□□ 0.32
LINC00887-202ENST00000414120 KTN1Q86UP2 1357 aaKnown RBP17.08■□□□□ 0.32
LINC00887-202ENST00000414120 SLFN14P0C7P3 912 aa17.07■□□□□ 0.32
LINC00887-202ENST00000414120 CEBPAP49715 358 aaPredicted RBP17.07■□□□□ 0.32
LINC00887-202ENST00000414120 RNF217Q8TC41 542 aa17.07■□□□□ 0.32
LINC00887-202ENST00000414120 TNNT3P45378 269 aaPredicted RBP17.07■□□□□ 0.32
LINC00887-202ENST00000414120 ICE2Q659A1 982 aa17.07■□□□□ 0.32
LINC00887-202ENST00000414120 HSP90AB1P08238 724 aaKnown RBP17.06■□□□□ 0.32
LINC00887-202ENST00000414120 GUCY2CP25092 1073 aa17.06■□□□□ 0.32
LINC00887-202ENST00000414120 C8orf34Q49A92 452 aa17.06■□□□□ 0.32
LINC00887-202ENST00000414120 MED4Q9NPJ6 270 aa17.06■□□□□ 0.32
LINC00887-202ENST00000414120 SKOR2Q2VWA4 1001 aaPredicted RBP17.05■□□□□ 0.32
LINC00887-202ENST00000414120 SIGLEC1Q9BZZ2 1709 aa17.05■□□□□ 0.32
LINC00887-202ENST00000414120 PDCL2Q8N4E4 241 aa17.04■□□□□ 0.32
LINC00887-202ENST00000414120 ZKSCAN5Q9Y2L8 839 aa17.04■□□□□ 0.32
LINC00887-202ENST00000414120 RRP1P56182 461 aaKnown RBP17.04■□□□□ 0.32
LINC00887-202ENST00000414120 PKD2Q13563 968 aa17.04■□□□□ 0.32
LINC00887-202ENST00000414120 MPHOSPH9Q99550 1183 aa17.03■□□□□ 0.32
LINC00887-202ENST00000414120 ZNF853P0CG23 659 aa17.02■□□□□ 0.32
LINC00887-202ENST00000414120 UPF2Q9HAU5 1272 aaKnown RBP17.02■□□□□ 0.32
LINC00887-202ENST00000414120 GCC2Q8IWJ2 1684 aa17.02■□□□□ 0.31
LINC00887-202ENST00000414120 KIF3CO14782 793 aa17.02■□□□□ 0.31
LINC00887-202ENST00000414120 EP400NLQ6ZTU2 488 aa17.02■□□□□ 0.31
LINC00887-202ENST00000414120 CNTLNQ9NXG0 1405 aa17.01■□□□□ 0.31
LINC00887-202ENST00000414120 DHX16O60231 1041 aaKnown RBP17■□□□□ 0.31
LINC00887-202ENST00000414120 FBXO31Q5XUX0 539 aaPredicted RBP17■□□□□ 0.31
LINC00887-202ENST00000414120 ITFG2Q969R8 447 aa16.99■□□□□ 0.31
LINC00887-202ENST00000414120 PDLIM2Q96JY6 352 aa16.99■□□□□ 0.31
LINC00887-202ENST00000414120 FAM210AQ96ND0 272 aa16.99■□□□□ 0.31
LINC00887-202ENST00000414120 SGSM3Q96HU1 749 aa16.99■□□□□ 0.31
LINC00887-202ENST00000414120 SPINK5Q9NQ38 1064 aaPredicted RBP16.99■□□□□ 0.31
LINC00887-202ENST00000414120 NASPP49321 788 aaPredicted RBP16.98■□□□□ 0.31
LINC00887-202ENST00000414120 TERF2Q15554 542 aa16.98■□□□□ 0.31
LINC00887-202ENST00000414120 ZBTB9Q96C00 473 aa16.98■□□□□ 0.31
LINC00887-202ENST00000414120 AGLP35573 1532 aa16.98■□□□□ 0.31
LINC00887-202ENST00000414120 PLCB2Q00722 1185 aa16.98■□□□□ 0.31
LINC00887-202ENST00000414120 ANKRD7Q92527 254 aa16.98■□□□□ 0.31
LINC00887-202ENST00000414120 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.97■□□□□ 0.31
LINC00887-202ENST00000414120 KNSTRNQ9Y448 316 aa16.97■□□□□ 0.31
LINC00887-202ENST00000414120 EXOC6Q8TAG9 804 aa16.97■□□□□ 0.31
LINC00887-202ENST00000414120 GZF1Q9H116 711 aaPredicted RBP16.97■□□□□ 0.31
LINC00887-202ENST00000414120 KDM4FA0A1W2PPD8 638 aa16.96■□□□□ 0.31
LINC00887-202ENST00000414120 TDO2P48775 406 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms