RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 ANKRD50Q9ULJ7 1429 aa12.71□□□□□ -0.37
SCN5A-204ENST00000414099 IFT140Q96RY7 1462 aa12.71□□□□□ -0.37
SCN5A-204ENST00000414099 PROSER2Q86WR7 435 aaPredicted RBP12.71□□□□□ -0.38
SCN5A-204ENST00000414099 CDK5RAP3Q96JB5 506 aa12.71□□□□□ -0.38
SCN5A-204ENST00000414099 ZFYVE27Q5T4F4 411 aa12.7□□□□□ -0.38
SCN5A-204ENST00000414099 CLASRPQ8N2M8 674 aaKnown RBP12.7□□□□□ -0.38
SCN5A-204ENST00000414099 TRIM21P19474 475 aaKnown RBP12.7□□□□□ -0.38
SCN5A-204ENST00000414099 PDCP20941 246 aa12.7□□□□□ -0.38
SCN5A-204ENST00000414099 MCM2P49736 904 aa12.7□□□□□ -0.38
SCN5A-204ENST00000414099 GOLGA6L10A6NI86 522 aa12.7□□□□□ -0.38
SCN5A-204ENST00000414099 ESCO1Q5FWF5 840 aa12.7□□□□□ -0.38
SCN5A-204ENST00000414099 FAM43AQ8N2R8 423 aa12.7□□□□□ -0.38
SCN5A-204ENST00000414099 NECTIN2Q92692 538 aa12.7□□□□□ -0.38
SCN5A-204ENST00000414099 DNAI2Q9GZS0 605 aa12.7□□□□□ -0.38
SCN5A-204ENST00000414099 SPG7Q9UQ90 795 aa12.7□□□□□ -0.38
SCN5A-204ENST00000414099 LEKR1Q6ZMV7 388 aa12.69□□□□□ -0.38
SCN5A-204ENST00000414099 TXNDC2Q86VQ3 553 aa12.69□□□□□ -0.38
SCN5A-204ENST00000414099 CASKIN1Q8WXD9 1431 aa12.69□□□□□ -0.38
SCN5A-204ENST00000414099 HFM1A2PYH4 1435 aa12.69□□□□□ -0.38
SCN5A-204ENST00000414099 DACH1Q9UI36 760 aa12.69□□□□□ -0.38
SCN5A-204ENST00000414099 WDHD1O75717 1129 aaPredicted RBP12.69□□□□□ -0.38
SCN5A-204ENST00000414099 DESP17661 470 aa12.69□□□□□ -0.38
SCN5A-204ENST00000414099 CUL7Q14999 1698 aa12.69□□□□□ -0.38
SCN5A-204ENST00000414099 BCL2L13Q9BXK5 485 aa12.68□□□□□ -0.38
SCN5A-204ENST00000414099 CNTLNQ9NXG0 1405 aa12.68□□□□□ -0.38
SCN5A-204ENST00000414099 ZSCAN25Q6NSZ9 544 aa12.68□□□□□ -0.38
SCN5A-204ENST00000414099 CCDC158Q5M9N0 1113 aa12.68□□□□□ -0.38
SCN5A-204ENST00000414099 FBXO3Q9UK99 471 aa12.68□□□□□ -0.38
SCN5A-204ENST00000414099 CAVIN1Q6NZI2 390 aaKnown RBP12.68□□□□□ -0.38
SCN5A-204ENST00000414099 ZNF396Q96N95 335 aaPredicted RBP12.68□□□□□ -0.38
SCN5A-204ENST00000414099 SLC52A1Q9NWF4 448 aa12.68□□□□□ -0.38
SCN5A-204ENST00000414099 IQCEQ6IPM2 695 aa12.68□□□□□ -0.38
SCN5A-204ENST00000414099 APAF1O14727 1248 aa12.68□□□□□ -0.38
SCN5A-204ENST00000414099 ANKLE2Q86XL3 938 aa12.67□□□□□ -0.38
SCN5A-204ENST00000414099 INCENPQ9NQS7 918 aa12.67□□□□□ -0.38
SCN5A-204ENST00000414099 SEPT7Q16181 437 aaKnown RBP12.67□□□□□ -0.38
SCN5A-204ENST00000414099 AIMP1Q12904 312 aaKnown RBP12.67□□□□□ -0.38
SCN5A-204ENST00000414099 NACAP1Q9BZK3 213 aa12.67□□□□□ -0.38
SCN5A-204ENST00000414099 VPS37CA5D8V6 355 aaPredicted RBP12.67□□□□□ -0.38
SCN5A-204ENST00000414099 FYB1O15117 783 aa12.67□□□□□ -0.38
SCN5A-204ENST00000414099 EZRP15311 586 aaKnown RBP12.67□□□□□ -0.38
SCN5A-204ENST00000414099 SAMD1Q6SPF0 538 aaPredicted RBP12.67□□□□□ -0.38
SCN5A-204ENST00000414099 ZNHIT6Q9NWK9 470 aaKnown RBP12.67□□□□□ -0.38
SCN5A-204ENST00000414099 EPRSP07814 1512 aaKnown RBP12.67□□□□□ -0.38
SCN5A-204ENST00000414099 MBD3O95983 291 aa12.66□□□□□ -0.38
SCN5A-204ENST00000414099 LRRC9Q6ZRR7 1453 aa12.66□□□□□ -0.38
SCN5A-204ENST00000414099 CNNM1Q9NRU3 951 aa12.66□□□□□ -0.38
SCN5A-204ENST00000414099 CC2D2AQ9P2K1 1620 aa12.66□□□□□ -0.38
SCN5A-204ENST00000414099 PRKRIP1Q9H875 184 aaPredicted RBP12.66□□□□□ -0.38
SCN5A-204ENST00000414099 COG6Q9Y2V7 657 aa12.65□□□□□ -0.38
SCN5A-204ENST00000414099 FANCIQ9NVI1 1328 aa12.65□□□□□ -0.38
SCN5A-204ENST00000414099 CABP4P57796 275 aa12.65□□□□□ -0.38
SCN5A-204ENST00000414099 VSIG10Q8N0Z9 540 aa12.65□□□□□ -0.38
SCN5A-204ENST00000414099 TSHZ2Q9NRE2 1034 aa12.65□□□□□ -0.38
SCN5A-204ENST00000414099 STIM1Q13586 685 aa12.65□□□□□ -0.38
SCN5A-204ENST00000414099 PLIN1O60240 522 aa12.65□□□□□ -0.38
SCN5A-204ENST00000414099 HMGN5P82970 282 aaKnown RBP12.65□□□□□ -0.38
SCN5A-204ENST00000414099 PAF1Q8N7H5 531 aa12.65□□□□□ -0.38
SCN5A-204ENST00000414099 PDILTQ8N807 584 aa12.65□□□□□ -0.38
SCN5A-204ENST00000414099 JMYQ8N9B5 988 aa12.65□□□□□ -0.38
SCN5A-204ENST00000414099 TTC39AQ5SRH9 613 aa12.65□□□□□ -0.39
SCN5A-204ENST00000414099 DAPK1P53355 1430 aa12.65□□□□□ -0.39
SCN5A-204ENST00000414099 MRE11P49959 708 aa12.64□□□□□ -0.39
SCN5A-204ENST00000414099 CDC45O75419 566 aa12.64□□□□□ -0.39
SCN5A-204ENST00000414099 ANKRD1Q15327 319 aa12.64□□□□□ -0.39
SCN5A-204ENST00000414099 FAM13BQ9NYF5 915 aa12.64□□□□□ -0.39
SCN5A-204ENST00000414099 RAD54L2Q9Y4B4 1467 aa12.64□□□□□ -0.39
SCN5A-204ENST00000414099 KINO60870 393 aaKnown RBP12.64□□□□□ -0.39
SCN5A-204ENST00000414099 HMOX1P09601 288 aa12.64□□□□□ -0.39
SCN5A-204ENST00000414099 KIAA0754O94854 1291 aa12.64□□□□□ -0.39
SCN5A-204ENST00000414099 PRG4Q92954 1404 aaPredicted RBP12.64□□□□□ -0.39
SCN5A-204ENST00000414099 NCAPD3P42695 1498 aa12.64□□□□□ -0.39
SCN5A-204ENST00000414099 KIF14Q15058 1648 aa12.63□□□□□ -0.39
SCN5A-204ENST00000414099 NCOA2Q15596 1464 aa12.63□□□□□ -0.39
SCN5A-204ENST00000414099 CRBNQ96SW2 442 aa12.63□□□□□ -0.39
SCN5A-204ENST00000414099 ZNF652Q9Y2D9 606 aa12.63□□□□□ -0.39
SCN5A-204ENST00000414099 BRD4O60885 1362 aaPredicted RBP12.63□□□□□ -0.39
SCN5A-204ENST00000414099 GBP2P32456 591 aaPredicted RBP12.63□□□□□ -0.39
SCN5A-204ENST00000414099 USP8P40818 1118 aa12.63□□□□□ -0.39
SCN5A-204ENST00000414099 TOM1L2Q6ZVM7 507 aa12.63□□□□□ -0.39
SCN5A-204ENST00000414099 FSD1Q9BTV5 496 aa12.63□□□□□ -0.39
SCN5A-204ENST00000414099 ZNF287Q9HBT7 754 aa12.63□□□□□ -0.39
SCN5A-204ENST00000414099 STRN4Q9NRL3 753 aa12.63□□□□□ -0.39
SCN5A-204ENST00000414099 EIF3JO75822 258 aaKnown RBP12.63□□□□□ -0.39
SCN5A-204ENST00000414099 FOXD4L6Q3SYB3 417 aaPredicted RBP12.63□□□□□ -0.39
SCN5A-204ENST00000414099 FOXD4L3Q6VB84 417 aaPredicted RBP12.63□□□□□ -0.39
SCN5A-204ENST00000414099 NEFHP12036 1026 aa12.62□□□□□ -0.39
SCN5A-204ENST00000414099 RBM42Q9BTD8 480 aaKnown RBP12.62□□□□□ -0.39
SCN5A-204ENST00000414099 CT47B1P0C2W7 299 aaPredicted RBP12.62□□□□□ -0.39
SCN5A-204ENST00000414099 PDIA4P13667 645 aaKnown RBP12.62□□□□□ -0.39
SCN5A-204ENST00000414099 CCT4P50991 539 aaKnown RBP12.62□□□□□ -0.39
SCN5A-204ENST00000414099 MPHOSPH8Q99549 860 aa12.62□□□□□ -0.39
SCN5A-204ENST00000414099 SDF4Q9BRK5 362 aa12.62□□□□□ -0.39
SCN5A-204ENST00000414099 GNAI2P04899 355 aa12.62□□□□□ -0.39
SCN5A-204ENST00000414099 PPP1R1BQ9UD71 204 aaPredicted RBP12.62□□□□□ -0.39
SCN5A-204ENST00000414099 TRIM22Q8IYM9 498 aa12.62□□□□□ -0.39
SCN5A-204ENST00000414099 NASPP49321 788 aaPredicted RBP12.62□□□□□ -0.39
SCN5A-204ENST00000414099 RPGRIP1LQ68CZ1 1315 aa12.62□□□□□ -0.39
SCN5A-204ENST00000414099 KRT18P05783 430 aaKnown RBP12.61□□□□□ -0.39
SCN5A-204ENST00000414099 CBFA2T2O43439 604 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms