RNA–Protein interactions for RNA: ENST00000413622.5

SLC39A1-205, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 1,030 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-205ENST00000413622 PLEKHG5O94827 1062 aa26.95■■□□□ 1.9
SLC39A1-205ENST00000413622 NGLY1Q96IV0 654 aa26.95■■□□□ 1.9
SLC39A1-205ENST00000413622 CCDC61Q9Y6R9 512 aa26.95■■□□□ 1.9
SLC39A1-205ENST00000413622 PIK3C2AO00443 1686 aa26.95■■□□□ 1.9
SLC39A1-205ENST00000413622 SBNO2Q9Y2G9 1366 aa26.94■■□□□ 1.9
SLC39A1-205ENST00000413622 NGDNQ8NEJ9 315 aaKnown RBP26.93■■□□□ 1.9
SLC39A1-205ENST00000413622 SSH2Q76I76 1423 aa26.92■■□□□ 1.9
SLC39A1-205ENST00000413622 MON2Q7Z3U7 1717 aa26.91■■□□□ 1.9
SLC39A1-205ENST00000413622 SRPK2P78362 688 aaKnown RBP26.91■■□□□ 1.9
SLC39A1-205ENST00000413622 QTRT2Q9H974 415 aaKnown RBP26.91■■□□□ 1.9
SLC39A1-205ENST00000413622 CARD11Q9BXL7 1154 aa26.9■■□□□ 1.9
SLC39A1-205ENST00000413622 USP21Q9UK80 565 aa26.9■■□□□ 1.9
SLC39A1-205ENST00000413622 CD163L1Q9NR16 1453 aa26.89■■□□□ 1.9
SLC39A1-205ENST00000413622 COL14A1Q05707 1796 aaKnown RBP26.89■■□□□ 1.89
SLC39A1-205ENST00000413622 LMOD2Q6P5Q4 547 aa26.88■■□□□ 1.89
SLC39A1-205ENST00000413622 USP6P35125 1406 aa26.88■■□□□ 1.89
SLC39A1-205ENST00000413622 RXRBP28702 533 aa26.87■■□□□ 1.89
SLC39A1-205ENST00000413622 CABP1Q9NZU7 370 aa26.86■■□□□ 1.89
SLC39A1-205ENST00000413622 FAM83GA6ND36 823 aa26.85■■□□□ 1.89
SLC39A1-205ENST00000413622 TESK2Q96S53 571 aa26.85■■□□□ 1.89
SLC39A1-205ENST00000413622 BRWD3Q6RI45 1802 aa26.85■■□□□ 1.89
SLC39A1-205ENST00000413622 LMO7Q8WWI1 1683 aa26.85■■□□□ 1.89
SLC39A1-205ENST00000413622 EVC2Q86UK5 1308 aa26.85■■□□□ 1.89
SLC39A1-205ENST00000413622 EP400Q96L91 3159 aa26.85■■□□□ 1.89
SLC39A1-205ENST00000413622 CPSF1Q10570 1443 aaKnown RBP26.83■■□□□ 1.89
SLC39A1-205ENST00000413622 PAK3O75914 559 aaPredicted RBP26.83■■□□□ 1.89
SLC39A1-205ENST00000413622 NUTM2GQ5VZR2 741 aa26.83■■□□□ 1.89
SLC39A1-205ENST00000413622 RBM6P78332 1123 aaKnown RBP26.82■■□□□ 1.88
SLC39A1-205ENST00000413622 SLIT3O75094 1523 aa26.81■■□□□ 1.88
SLC39A1-205ENST00000413622 USP19O94966 1318 aa26.81■■□□□ 1.88
SLC39A1-205ENST00000413622 CLSPNQ9HAW4 1339 aa26.8■■□□□ 1.88
SLC39A1-205ENST00000413622 TRPC5Q9UL62 973 aaPredicted RBP26.79■■□□□ 1.88
SLC39A1-205ENST00000413622 USP54Q70EL1 1684 aa26.79■■□□□ 1.88
SLC39A1-205ENST00000413622 UNC5CLQ8IV45 518 aa26.78■■□□□ 1.88
SLC39A1-205ENST00000413622 COL18A1P39060 1754 aa26.77■■□□□ 1.88
SLC39A1-205ENST00000413622 KIAA0232Q92628 1395 aa26.77■■□□□ 1.88
SLC39A1-205ENST00000413622 ST20-MTHFSA0A0A6YYL1 179 aa26.76■■□□□ 1.87
SLC39A1-205ENST00000413622 ATAD2Q6PL18 1390 aa26.74■■□□□ 1.87
SLC39A1-205ENST00000413622 USP47Q96K76 1375 aa26.74■■□□□ 1.87
SLC39A1-205ENST00000413622 MYOM1P52179 1685 aa26.74■■□□□ 1.87
SLC39A1-205ENST00000413622 CAMTA1Q9Y6Y1 1673 aa26.74■■□□□ 1.87
SLC39A1-205ENST00000413622 GJD4Q96KN9 370 aaPredicted RBP26.74■■□□□ 1.87
SLC39A1-205ENST00000413622 NFAT5O94916 1531 aa26.71■■□□□ 1.87
SLC39A1-205ENST00000413622 THSD7AQ9UPZ6 1657 aa26.71■■□□□ 1.87
SLC39A1-205ENST00000413622 HAP1P54257 671 aaPredicted RBP26.71■■□□□ 1.87
SLC39A1-205ENST00000413622 CHRNA2Q15822 529 aa26.71■■□□□ 1.87
SLC39A1-205ENST00000413622 VPS72Q15906 364 aa26.7■■□□□ 1.86
SLC39A1-205ENST00000413622 UPF1Q92900 1129 aaKnown RBP eCLIP26.7■■□□□ 1.86
SLC39A1-205ENST00000413622 BRD4O60885 1362 aaPredicted RBP26.7■■□□□ 1.86
SLC39A1-205ENST00000413622 RGPD5Q99666 1765 aa26.69■■□□□ 1.86
SLC39A1-205ENST00000413622 ABTB2Q8N961 1025 aa26.69■■□□□ 1.86
SLC39A1-205ENST00000413622 BTG4Q9NY30 223 aa26.69■■□□□ 1.86
SLC39A1-205ENST00000413622 TTC21BQ7Z4L5 1316 aa26.68■■□□□ 1.86
SLC39A1-205ENST00000413622 SLC12A5Q9H2X9 1139 aa26.68■■□□□ 1.86
SLC39A1-205ENST00000413622 CPDO75976 1380 aa26.68■■□□□ 1.86
SLC39A1-205ENST00000413622 ZC3H6P61129 1189 aaKnown RBP26.67■■□□□ 1.86
SLC39A1-205ENST00000413622 ZRANB1Q9UGI0 708 aa26.67■■□□□ 1.86
SLC39A1-205ENST00000413622 A0A1W2PP64 1363 aa26.67■■□□□ 1.86
SLC39A1-205ENST00000413622 KTN1Q86UP2 1357 aaKnown RBP26.65■■□□□ 1.86
SLC39A1-205ENST00000413622 PRDM11Q9NQV5 511 aa26.64■■□□□ 1.86
SLC39A1-205ENST00000413622 TIMELESSQ9UNS1 1208 aa26.64■■□□□ 1.86
SLC39A1-205ENST00000413622 GCP02774 474 aa26.63■■□□□ 1.85
SLC39A1-205ENST00000413622 CCER1Q8TC90 406 aaPredicted RBP26.62■■□□□ 1.85
SLC39A1-205ENST00000413622 COL5A2P05997 1499 aaPredicted RBP26.61■■□□□ 1.85
SLC39A1-205ENST00000413622 ONECUT3O60422 494 aaPredicted RBP26.6■■□□□ 1.85
SLC39A1-205ENST00000413622 SPATA31A5Q5VU36 1347 aa26.6■■□□□ 1.85
SLC39A1-205ENST00000413622 SPATA31A7Q8IWB4 1347 aa26.6■■□□□ 1.85
SLC39A1-205ENST00000413622 LTN1O94822 1766 aa26.59■■□□□ 1.85
SLC39A1-205ENST00000413622 NLRP6P59044 892 aa26.59■■□□□ 1.85
SLC39A1-205ENST00000413622 WNK3Q9BYP7 1800 aa26.59■■□□□ 1.85
SLC39A1-205ENST00000413622 NLRP13Q86W25 1043 aa26.58■■□□□ 1.85
SLC39A1-205ENST00000413622 PUS7Q96PZ0 661 aaKnown RBP26.58■■□□□ 1.85
SLC39A1-205ENST00000413622 OVOS2A0A0J9YW53 1432 aa26.57■■□□□ 1.84
SLC39A1-205ENST00000413622 OVOS2Q6IE36 1432 aa26.57■■□□□ 1.84
SLC39A1-205ENST00000413622 EDC4Q6P2E9 1401 aaKnown RBP26.57■■□□□ 1.84
SLC39A1-205ENST00000413622 NME9Q86XW9 330 aa26.57■■□□□ 1.84
SLC39A1-205ENST00000413622 ZNF692Q9BU19 519 aaPredicted RBP26.57■■□□□ 1.84
SLC39A1-205ENST00000413622 TTC21AQ8NDW8 1320 aa26.57■■□□□ 1.84
SLC39A1-205ENST00000413622 USP31Q70CQ4 1352 aa26.57■■□□□ 1.84
SLC39A1-205ENST00000413622 SEPT12Q8IYM1 358 aa26.55■■□□□ 1.84
SLC39A1-205ENST00000413622 TMC1Q8TDI8 760 aa26.55■■□□□ 1.84
SLC39A1-205ENST00000413622 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.54■■□□□ 1.84
SLC39A1-205ENST00000413622 SPATA31A1Q5TZJ5 1347 aa26.54■■□□□ 1.84
SLC39A1-205ENST00000413622 FAM98CQ17RN3 349 aaKnown RBP26.53■■□□□ 1.84
SLC39A1-205ENST00000413622 AXIN2Q9Y2T1 843 aa26.53■■□□□ 1.84
SLC39A1-205ENST00000413622 LARP1Q6PKG0 1096 aaKnown RBP26.52■■□□□ 1.84
SLC39A1-205ENST00000413622 AATKQ6ZMQ8 1374 aa26.52■■□□□ 1.84
SLC39A1-205ENST00000413622 STRN4Q9NRL3 753 aa26.51■■□□□ 1.83
SLC39A1-205ENST00000413622 CCDC9Q9Y3X0 531 aaKnown RBP26.51■■□□□ 1.83
SLC39A1-205ENST00000413622 ARHGEF25Q86VW2 580 aa26.5■■□□□ 1.83
SLC39A1-205ENST00000413622 KIF20BQ96Q89 1820 aa26.5■■□□□ 1.83
SLC39A1-205ENST00000413622 PARP4Q9UKK3 1724 aaKnown RBP26.5■■□□□ 1.83
SLC39A1-205ENST00000413622 NINLQ9Y2I6 1382 aa26.49■■□□□ 1.83
SLC39A1-205ENST00000413622 TNS1Q9HBL0 1735 aaKnown RBP26.48■■□□□ 1.83
SLC39A1-205ENST00000413622 ANKRD36BQ8N2N9 1353 aa26.48■■□□□ 1.83
SLC39A1-205ENST00000413622 LRRC37A3O60309 1634 aa26.48■■□□□ 1.83
SLC39A1-205ENST00000413622 SOX12O15370 315 aa26.47■■□□□ 1.83
SLC39A1-205ENST00000413622 ABCC6O95255 1503 aa26.47■■□□□ 1.83
SLC39A1-205ENST00000413622 TMF1P82094 1093 aa26.44■■□□□ 1.82
SLC39A1-205ENST00000413622 FAM182BQ5T319 152 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms