RNA–Protein interactions for RNA: ENST00000410876.1

RNU4-47P-201, Transcript of RNA, U4 small nuclear 47, pseudogene, humanhuman

BASIC

Gene RNU4-47P, Length 114 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-47P-201ENST00000410876 TRIM26Q12899 539 aaPredicted RBP4.59□□□□□ -1.67
RNU4-47P-201ENST00000410876 SPATA31A5Q5VU36 1347 aa4.59□□□□□ -1.67
RNU4-47P-201ENST00000410876 FAM196AQ6ZSG2 479 aa4.59□□□□□ -1.67
RNU4-47P-201ENST00000410876 KRT27Q7Z3Y8 459 aa4.59□□□□□ -1.67
RNU4-47P-201ENST00000410876 SPATA31A7Q8IWB4 1347 aa4.59□□□□□ -1.67
RNU4-47P-201ENST00000410876 SEPT12Q8IYM1 358 aa4.59□□□□□ -1.67
RNU4-47P-201ENST00000410876 MINK1Q8N4C8 1332 aaPredicted RBP4.59□□□□□ -1.67
RNU4-47P-201ENST00000410876 ABTB2Q8N961 1025 aa4.59□□□□□ -1.67
RNU4-47P-201ENST00000410876 PMFBP1Q8TBY8 1022 aa4.59□□□□□ -1.67
RNU4-47P-201ENST00000410876 PARD3Q8TEW0 1356 aa4.59□□□□□ -1.67
RNU4-47P-201ENST00000410876 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.59□□□□□ -1.67
RNU4-47P-201ENST00000410876 PRR36Q9H6K5 1346 aa4.59□□□□□ -1.67
RNU4-47P-201ENST00000410876 NINLQ9Y2I6 1382 aa4.59□□□□□ -1.67
RNU4-47P-201ENST00000410876 RALGAPBQ86X10 1494 aa4.58□□□□□ -1.68
RNU4-47P-201ENST00000410876 RGS12O14924 1447 aa4.58□□□□□ -1.68
RNU4-47P-201ENST00000410876 AATKQ6ZMQ8 1374 aa4.58□□□□□ -1.68
RNU4-47P-201ENST00000410876 USP19O94966 1318 aa4.58□□□□□ -1.68
RNU4-47P-201ENST00000410876 PAK3O75914 559 aaPredicted RBP4.58□□□□□ -1.68
RNU4-47P-201ENST00000410876 EVA1CP58658 441 aa4.58□□□□□ -1.68
RNU4-47P-201ENST00000410876 SRPK2P78362 688 aaKnown RBP4.58□□□□□ -1.68
RNU4-47P-201ENST00000410876 XPCQ01831 940 aaPredicted RBP4.58□□□□□ -1.68
RNU4-47P-201ENST00000410876 SAFB2Q14151 953 aaKnown RBP eCLIP4.58□□□□□ -1.68
RNU4-47P-201ENST00000410876 NBPF1Q3BBV0 1214 aa4.58□□□□□ -1.68
RNU4-47P-201ENST00000410876 CDCA8Q53HL2 280 aa4.58□□□□□ -1.68
RNU4-47P-201ENST00000410876 LMOD2Q6P5Q4 547 aa4.58□□□□□ -1.68
RNU4-47P-201ENST00000410876 HIRIP3Q9BW71 556 aaPredicted RBP4.58□□□□□ -1.68
RNU4-47P-201ENST00000410876 PRDM11Q9NQV5 511 aa4.58□□□□□ -1.68
RNU4-47P-201ENST00000410876 BTG4Q9NY30 223 aa4.58□□□□□ -1.68
RNU4-47P-201ENST00000410876 NWD2Q9ULI1 1742 aa4.58□□□□□ -1.68
RNU4-47P-201ENST00000410876 ROCK2O75116 1388 aaKnown RBP4.57□□□□□ -1.68
RNU4-47P-201ENST00000410876 SPATA31A1Q5TZJ5 1347 aa4.57□□□□□ -1.68
RNU4-47P-201ENST00000410876 BAG6P46379 1132 aa4.57□□□□□ -1.68
RNU4-47P-201ENST00000410876 TCP11L2Q8N4U5 519 aa4.57□□□□□ -1.68
RNU4-47P-201ENST00000410876 TERF2IPQ9NYB0 399 aa4.57□□□□□ -1.68
RNU4-47P-201ENST00000410876 CABP1Q9NZU7 370 aa4.57□□□□□ -1.68
RNU4-47P-201ENST00000410876 USP32Q8NFA0 1604 aa4.57□□□□□ -1.68
RNU4-47P-201ENST00000410876 DISP2A7MBM2 1401 aa4.56□□□□□ -1.68
RNU4-47P-201ENST00000410876 BCL9O00512 1426 aa4.56□□□□□ -1.68
RNU4-47P-201ENST00000410876 CPSF1Q10570 1443 aaKnown RBP4.56□□□□□ -1.68
RNU4-47P-201ENST00000410876 SSH2Q76I76 1423 aa4.56□□□□□ -1.68
RNU4-47P-201ENST00000410876 MARF1Q9Y4F3 1742 aaKnown RBP4.56□□□□□ -1.68
RNU4-47P-201ENST00000410876 PLSCR1O15162 318 aa4.56□□□□□ -1.68
RNU4-47P-201ENST00000410876 NLRP6P59044 892 aa4.56□□□□□ -1.68
RNU4-47P-201ENST00000410876 CABLES1Q8TDN4 633 aa4.56□□□□□ -1.68
RNU4-47P-201ENST00000410876 CCDC9Q9Y3X0 531 aaKnown RBP4.56□□□□□ -1.68
RNU4-47P-201ENST00000410876 USP6P35125 1406 aa4.55□□□□□ -1.68
RNU4-47P-201ENST00000410876 PPIP5K1Q6PFW1 1433 aa4.55□□□□□ -1.68
RNU4-47P-201ENST00000410876 COL14A1Q05707 1796 aaKnown RBP4.55□□□□□ -1.68
RNU4-47P-201ENST00000410876 ITSN1Q15811 1721 aa4.55□□□□□ -1.68
RNU4-47P-201ENST00000410876 USP31Q70CQ4 1352 aa4.55□□□□□ -1.68
RNU4-47P-201ENST00000410876 KIAA0232Q92628 1395 aa4.55□□□□□ -1.68
RNU4-47P-201ENST00000410876 ALS2Q96Q42 1657 aa4.55□□□□□ -1.68
RNU4-47P-201ENST00000410876 PDE3BQ13370 1112 aa4.55□□□□□ -1.68
RNU4-47P-201ENST00000410876 HDGFL2Q7Z4V5 671 aaPredicted RBP4.55□□□□□ -1.68
RNU4-47P-201ENST00000410876 ARHGEF25Q86VW2 580 aa4.55□□□□□ -1.68
RNU4-47P-201ENST00000410876 CARD11Q9BXL7 1154 aa4.55□□□□□ -1.68
RNU4-47P-201ENST00000410876 ABCC6O95255 1503 aa4.55□□□□□ -1.68
RNU4-47P-201ENST00000410876 TRPM3Q9HCF6 1732 aaPredicted RBP4.55□□□□□ -1.68
RNU4-47P-201ENST00000410876 TONSLQ96HA7 1378 aa4.54□□□□□ -1.68
RNU4-47P-201ENST00000410876 TTC21BQ7Z4L5 1316 aa4.54□□□□□ -1.68
RNU4-47P-201ENST00000410876 NEUROD1Q13562 356 aa4.54□□□□□ -1.68
RNU4-47P-201ENST00000410876 FAM98CQ17RN3 349 aaKnown RBP4.54□□□□□ -1.68
RNU4-47P-201ENST00000410876 SIN3AQ96ST3 1273 aa4.54□□□□□ -1.68
RNU4-47P-201ENST00000410876 CARD10Q9BWT7 1032 aa4.54□□□□□ -1.68
RNU4-47P-201ENST00000410876 CABP2Q9NPB3 220 aa4.54□□□□□ -1.68
RNU4-47P-201ENST00000410876 ARHGEF28Q8N1W1 1705 aaKnown RBP4.54□□□□□ -1.68
RNU4-47P-201ENST00000410876 CRB1P82279 1406 aa4.54□□□□□ -1.68
RNU4-47P-201ENST00000410876 KIF24Q5T7B8 1368 aa4.53□□□□□ -1.68
RNU4-47P-201ENST00000410876 CCDC7Q96M83 1385 aa4.53□□□□□ -1.68
RNU4-47P-201ENST00000410876 GLI3P10071 1580 aa4.53□□□□□ -1.68
RNU4-47P-201ENST00000410876 CGNL1Q0VF96 1302 aa4.53□□□□□ -1.68
RNU4-47P-201ENST00000410876 WDR17Q8IZU2 1322 aa4.53□□□□□ -1.68
RNU4-47P-201ENST00000410876 ZC3H6P61129 1189 aaKnown RBP4.53□□□□□ -1.68
RNU4-47P-201ENST00000410876 TMF1P82094 1093 aa4.53□□□□□ -1.68
RNU4-47P-201ENST00000410876 NBPF14Q5TI25 921 aa4.53□□□□□ -1.68
RNU4-47P-201ENST00000410876 BCL11BQ9C0K0 894 aaPredicted RBP4.53□□□□□ -1.68
RNU4-47P-201ENST00000410876 EDC4Q6P2E9 1401 aaKnown RBP4.53□□□□□ -1.68
RNU4-47P-201ENST00000410876 KTN1Q86UP2 1357 aaKnown RBP4.53□□□□□ -1.69
RNU4-47P-201ENST00000410876 PLEKHG2Q9H7P9 1386 aa4.53□□□□□ -1.69
RNU4-47P-201ENST00000410876 EXOC5O00471 708 aa4.52□□□□□ -1.69
RNU4-47P-201ENST00000410876 DDB1Q16531 1140 aa4.52□□□□□ -1.69
RNU4-47P-201ENST00000410876 CAMKK2Q96RR4 588 aa4.52□□□□□ -1.69
RNU4-47P-201ENST00000410876 TESK2Q96S53 571 aa4.52□□□□□ -1.69
RNU4-47P-201ENST00000410876 SLIT3O75094 1523 aa4.51□□□□□ -1.69
RNU4-47P-201ENST00000410876 TOPAZ1Q8N9V7 1692 aa4.51□□□□□ -1.69
RNU4-47P-201ENST00000410876 COL5A2P05997 1499 aaPredicted RBP4.51□□□□□ -1.69
RNU4-47P-201ENST00000410876 TRPM1Q7Z4N2 1603 aa4.51□□□□□ -1.69
RNU4-47P-201ENST00000410876 RGPD8O14715 1765 aaPredicted RBP4.51□□□□□ -1.69
RNU4-47P-201ENST00000410876 A0A0G2JS52 829 aa4.51□□□□□ -1.69
RNU4-47P-201ENST00000410876 MYT1Q01538 1121 aa4.51□□□□□ -1.69
RNU4-47P-201ENST00000410876 CHRNA2Q15822 529 aa4.51□□□□□ -1.69
RNU4-47P-201ENST00000410876 LARP1Q6PKG0 1096 aaKnown RBP4.51□□□□□ -1.69
RNU4-47P-201ENST00000410876 TOM1L2Q6ZVM7 507 aa4.51□□□□□ -1.69
RNU4-47P-201ENST00000410876 IP6K1Q92551 441 aa4.51□□□□□ -1.69
RNU4-47P-201ENST00000410876 STRN4Q9NRL3 753 aa4.51□□□□□ -1.69
RNU4-47P-201ENST00000410876 CAMTA1Q9Y6Y1 1673 aa4.51□□□□□ -1.69
RNU4-47P-201ENST00000410876 OVOS2A0A0G2JMS6 1433 aa4.5□□□□□ -1.69
RNU4-47P-201ENST00000410876 OVOS2A0A0J9YW53 1432 aa4.5□□□□□ -1.69
RNU4-47P-201ENST00000410876 OVOS2Q6IE36 1432 aa4.5□□□□□ -1.69
RNU4-47P-201ENST00000410876 ST20-MTHFSA0A0A6YYL1 179 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms