RNA–Protein interactions for RNA: ENST00000410041.1

DYSF-209, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-209ENST00000410041 PTPN23Q9H3S7 1636 aa15.52■□□□□ 0.08
DYSF-209ENST00000410041 TMEM57Q8N5G2 664 aa15.52■□□□□ 0.07
DYSF-209ENST00000410041 ABCC5O15440 1437 aa15.51■□□□□ 0.07
DYSF-209ENST00000410041 PRDM2Q13029 1718 aa15.51■□□□□ 0.07
DYSF-209ENST00000410041 CCDC70Q6NSX1 233 aa15.51■□□□□ 0.07
DYSF-209ENST00000410041 POLA1P09884 1462 aaPredicted RBP15.51■□□□□ 0.07
DYSF-209ENST00000410041 EID1Q9Y6B2 187 aa15.5■□□□□ 0.07
DYSF-209ENST00000410041 SDF4Q9BRK5 362 aa15.5■□□□□ 0.07
DYSF-209ENST00000410041 CCDC112Q8NEF3 446 aa15.5■□□□□ 0.07
DYSF-209ENST00000410041 HOOK1Q9UJC3 728 aaKnown RBP15.5■□□□□ 0.07
DYSF-209ENST00000410041 SURF6O75683 361 aaKnown RBP15.5■□□□□ 0.07
DYSF-209ENST00000410041 RPAP2Q8IXW5 612 aaPredicted RBP15.49■□□□□ 0.07
DYSF-209ENST00000410041 SPC24Q8NBT2 197 aa15.49■□□□□ 0.07
DYSF-209ENST00000410041 GNAI2P04899 355 aa15.49■□□□□ 0.07
DYSF-209ENST00000410041 CLASRPQ8N2M8 674 aaKnown RBP15.49■□□□□ 0.07
DYSF-209ENST00000410041 MPNDQ8N594 471 aa15.49■□□□□ 0.07
DYSF-209ENST00000410041 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.49■□□□□ 0.07
DYSF-209ENST00000410041 SYCE3A1L190 88 aa15.49■□□□□ 0.07
DYSF-209ENST00000410041 TRIM29Q14134 588 aa15.49■□□□□ 0.07
DYSF-209ENST00000410041 AEBP1Q8IUX7 1158 aa15.49■□□□□ 0.07
DYSF-209ENST00000410041 DDX58O95786 925 aaKnown RBP15.49■□□□□ 0.07
DYSF-209ENST00000410041 C1orf141Q5JVX7 400 aa15.49■□□□□ 0.07
DYSF-209ENST00000410041 IGHDP01880 384 aa15.48■□□□□ 0.07
DYSF-209ENST00000410041 C8orf34Q49A92 452 aa15.48■□□□□ 0.07
DYSF-209ENST00000410041 PES1O00541 588 aaKnown RBP15.48■□□□□ 0.07
DYSF-209ENST00000410041 XRCC6P12956 609 aaKnown RBP eCLIP15.48■□□□□ 0.07
DYSF-209ENST00000410041 CCDC9Q9Y3X0 531 aaKnown RBP15.48■□□□□ 0.07
DYSF-209ENST00000410041 HMGXB3Q12766 1538 aa15.48■□□□□ 0.07
DYSF-209ENST00000410041 SYNE3Q6ZMZ3 975 aa15.48■□□□□ 0.07
DYSF-209ENST00000410041 ACBD3Q9H3P7 528 aa15.48■□□□□ 0.07
DYSF-209ENST00000410041 KINO60870 393 aaKnown RBP15.47■□□□□ 0.07
DYSF-209ENST00000410041 IPO7O95373 1038 aaKnown RBP15.47■□□□□ 0.07
DYSF-209ENST00000410041 AFAP1Q8N556 730 aa15.47■□□□□ 0.07
DYSF-209ENST00000410041 FBXW7Q969H0 707 aa15.47■□□□□ 0.07
DYSF-209ENST00000410041 ARHGAP5Q13017 1502 aa15.47■□□□□ 0.07
DYSF-209ENST00000410041 SYNJ2O15056 1496 aa15.47■□□□□ 0.07
DYSF-209ENST00000410041 SSFA2P28290 1259 aa15.47■□□□□ 0.07
DYSF-209ENST00000410041 TOPBP1Q92547 1522 aa15.47■□□□□ 0.07
DYSF-209ENST00000410041 HSP90B2PQ58FF3 399 aa15.47■□□□□ 0.07
DYSF-209ENST00000410041 NOM1Q5C9Z4 860 aaKnown RBP15.47■□□□□ 0.07
DYSF-209ENST00000410041 ANKRD20A12PQ8NF67 263 aa15.47■□□□□ 0.07
DYSF-209ENST00000410041 SSH1Q8WYL5 1049 aa15.47■□□□□ 0.07
DYSF-209ENST00000410041 TMPOP42166 694 aaKnown RBP15.46■□□□□ 0.07
DYSF-209ENST00000410041 GPRASP1Q5JY77 1395 aa15.46■□□□□ 0.07
DYSF-209ENST00000410041 CCT4P50991 539 aaKnown RBP15.46■□□□□ 0.07
DYSF-209ENST00000410041 CCDC30Q5VVM6 783 aa15.46■□□□□ 0.07
DYSF-209ENST00000410041 LRRCC1Q9C099 1032 aa15.46■□□□□ 0.07
DYSF-209ENST00000410041 MCM5P33992 734 aa15.46■□□□□ 0.07
DYSF-209ENST00000410041 CDK13Q14004 1512 aaKnown RBP15.46■□□□□ 0.06
DYSF-209ENST00000410041 CCP110O43303 1012 aa15.46■□□□□ 0.06
DYSF-209ENST00000410041 KRT85P78386 507 aa15.46■□□□□ 0.06
DYSF-209ENST00000410041 AKAP17AQ02040 695 aaKnown RBP15.46■□□□□ 0.06
DYSF-209ENST00000410041 CWC15Q9P013 229 aaKnown RBP15.46■□□□□ 0.06
DYSF-209ENST00000410041 DHX8Q14562 1220 aaKnown RBP15.45■□□□□ 0.06
DYSF-209ENST00000410041 FCHSD2O94868 740 aa15.45■□□□□ 0.06
DYSF-209ENST00000410041 DHX29Q7Z478 1369 aaKnown RBP15.45■□□□□ 0.06
DYSF-209ENST00000410041 XPCQ01831 940 aaPredicted RBP15.45■□□□□ 0.06
DYSF-209ENST00000410041 PDCL2Q8N4E4 241 aa15.45■□□□□ 0.06
DYSF-209ENST00000410041 SLC4A2P04920 1241 aa15.45■□□□□ 0.06
DYSF-209ENST00000410041 KLHL40Q2TBA0 621 aa15.45■□□□□ 0.06
DYSF-209ENST00000410041 SRCIN1Q9C0H9 1055 aa15.45■□□□□ 0.06
DYSF-209ENST00000410041 BCL11BQ9C0K0 894 aaPredicted RBP15.45■□□□□ 0.06
DYSF-209ENST00000410041 CYP46A1Q9Y6A2 500 aa15.45■□□□□ 0.06
DYSF-209ENST00000410041 HIP1O00291 1037 aa15.44■□□□□ 0.06
DYSF-209ENST00000410041 ALDH1L2Q3SY69 923 aa15.44■□□□□ 0.06
DYSF-209ENST00000410041 FSD1Q9BTV5 496 aa15.44■□□□□ 0.06
DYSF-209ENST00000410041 TNMDQ9H2S6 317 aa15.44■□□□□ 0.06
DYSF-209ENST00000410041 NSD3Q9BZ95 1437 aa15.44■□□□□ 0.06
DYSF-209ENST00000410041 TRDNQ13061 729 aa15.44■□□□□ 0.06
DYSF-209ENST00000410041 ABCC11Q96J66 1382 aa15.43■□□□□ 0.06
DYSF-209ENST00000410041 BMP2KLQ5H9B9 411 aa15.43■□□□□ 0.06
DYSF-209ENST00000410041 ABCA10Q8WWZ4 1543 aa15.43■□□□□ 0.06
DYSF-209ENST00000410041 FOSBP53539 338 aa15.43■□□□□ 0.06
DYSF-209ENST00000410041 PTPRKQ15262 1439 aa15.42■□□□□ 0.06
DYSF-209ENST00000410041 TRHP20396 242 aaPredicted RBP15.42■□□□□ 0.06
DYSF-209ENST00000410041 OLFM4Q6UX06 510 aa15.42■□□□□ 0.06
DYSF-209ENST00000410041 PDIA4P13667 645 aaKnown RBP15.42■□□□□ 0.06
DYSF-209ENST00000410041 GAS2L2Q8NHY3 880 aa15.42■□□□□ 0.06
DYSF-209ENST00000410041 ZSCAN31Q96LW9 406 aaPredicted RBP15.42■□□□□ 0.06
DYSF-209ENST00000410041 SMC2O95347 1197 aa15.41■□□□□ 0.06
DYSF-209ENST00000410041 ZMYND15Q9H091 742 aa15.41■□□□□ 0.06
DYSF-209ENST00000410041 BAG4O95429 457 aaKnown RBP15.41■□□□□ 0.06
DYSF-209ENST00000410041 ANKRD1Q15327 319 aa15.41■□□□□ 0.06
DYSF-209ENST00000410041 TRIM27P14373 513 aa15.4■□□□□ 0.06
DYSF-209ENST00000410041 ZNF396Q96N95 335 aaPredicted RBP15.4■□□□□ 0.06
DYSF-209ENST00000410041 NUP62CLQ9H1M0 184 aa15.4■□□□□ 0.06
DYSF-209ENST00000410041 LARP1BQ659C4 914 aaKnown RBP15.4■□□□□ 0.06
DYSF-209ENST00000410041 PARD3Q8TEW0 1356 aa15.4■□□□□ 0.06
DYSF-209ENST00000410041 PANK2Q9BZ23 570 aa15.4■□□□□ 0.06
DYSF-209ENST00000410041 CAMSAP2Q08AD1 1489 aa15.39■□□□□ 0.05
DYSF-209ENST00000410041 NFE2L2Q16236 605 aa15.39■□□□□ 0.05
DYSF-209ENST00000410041 ERC1Q8IUD2 1116 aa15.39■□□□□ 0.05
DYSF-209ENST00000410041 RALYLQ86SE5 291 aaKnown RBP15.39■□□□□ 0.05
DYSF-209ENST00000410041 SAFBQ15424 915 aaKnown RBP eCLIP15.39■□□□□ 0.05
DYSF-209ENST00000410041 TTC5Q8N0Z6 440 aa15.39■□□□□ 0.05
DYSF-209ENST00000410041 TAF3Q5VWG9 929 aa15.38■□□□□ 0.05
DYSF-209ENST00000410041 ERCC4Q92889 916 aaPredicted RBP15.38■□□□□ 0.05
DYSF-209ENST00000410041 PRAM1Q96QH2 718 aa15.38■□□□□ 0.05
DYSF-209ENST00000410041 CCDC141Q6ZP82 1450 aa15.38■□□□□ 0.05
DYSF-209ENST00000410041 DYNC1I1O14576 645 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms