RNA–Protein interactions for RNA: ENST00000409855.5

SCN7A-201, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN7A, Length 7,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-201ENST00000409855 ATP10AO60312 1499 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 ZGPATQ8N5A5 531 aaKnown RBP2.55□□□□□ -2
SCN7A-201ENST00000409855 FERMT2Q96AC1 680 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 ATP6V1DQ9Y5K8 247 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 SOX12O15370 315 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 CT47B1P0C2W7 299 aaPredicted RBP2.55□□□□□ -2
SCN7A-201ENST00000409855 PDIA4P13667 645 aaKnown RBP2.55□□□□□ -2
SCN7A-201ENST00000409855 DHX8Q14562 1220 aaKnown RBP2.55□□□□□ -2
SCN7A-201ENST00000409855 BRDTQ58F21 947 aaPredicted RBP2.55□□□□□ -2
SCN7A-201ENST00000409855 CCDC30Q5VVM6 783 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 CCDC125Q86Z20 511 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 JDP2Q8WYK2 163 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 CCDC136Q96JN2 1154 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 PHF8Q9UPP1 1060 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 TTC21BQ7Z4L5 1316 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 ABCC2Q92887 1545 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 HNRNPUQ00839 825 aaKnown RBP eCLIP2.55□□□□□ -2
SCN7A-201ENST00000409855 SAFB2Q14151 953 aaKnown RBP eCLIP2.55□□□□□ -2
SCN7A-201ENST00000409855 BCL11AQ9H165 835 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 C9orf78Q9NZ63 289 aaPredicted RBP2.55□□□□□ -2
SCN7A-201ENST00000409855 MAST3O60307 1309 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 NCOA1Q15788 1441 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 LRRC9Q6ZRR7 1453 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 CCER2I3L3R5 266 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 TCERG1O14776 1098 aaKnown RBP2.55□□□□□ -2
SCN7A-201ENST00000409855 EIF3DO15371 548 aaKnown RBP eCLIP2.55□□□□□ -2
SCN7A-201ENST00000409855 TCIRG1Q13488 830 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 PPP1R42Q7Z4L9 355 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 C19orf44Q9H6X5 657 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 SH2D4AQ9H788 454 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 TRPC5Q9UL62 973 aaPredicted RBP2.55□□□□□ -2
SCN7A-201ENST00000409855 ASXL2Q76L83 1435 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 RAPGEF3O95398 923 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 TPM1P09493 284 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 IRX6P78412 446 aaPredicted RBP2.55□□□□□ -2
SCN7A-201ENST00000409855 SAFBQ15424 915 aaKnown RBP eCLIP2.55□□□□□ -2
SCN7A-201ENST00000409855 CCDC158Q5M9N0 1113 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 CCDC146Q8IYE0 955 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 FAM9BQ8IZU0 186 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 RBM42Q9BTD8 480 aaKnown RBP2.55□□□□□ -2
SCN7A-201ENST00000409855 SUPT16HQ9Y5B9 1047 aaKnown RBP2.55□□□□□ -2
SCN7A-201ENST00000409855 PLCH2O75038 1416 aa2.55□□□□□ -2
SCN7A-201ENST00000409855 MAPK8IP2Q13387 824 aaPredicted RBP2.54□□□□□ -2
SCN7A-201ENST00000409855 TTLL12Q14166 644 aaPredicted RBP2.54□□□□□ -2
SCN7A-201ENST00000409855 ZNF428Q96B54 188 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 STRN4Q9NRL3 753 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 TOMM22Q9NS69 142 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 GTF3C3Q9Y5Q9 886 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 GNAI3P08754 354 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 PUS7Q96PZ0 661 aaKnown RBP2.54□□□□□ -2
SCN7A-201ENST00000409855 PABPC4Q13310 644 aaKnown RBP eCLIP2.54□□□□□ -2
SCN7A-201ENST00000409855 RIC3Q7Z5B4 369 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 LTV1Q96GA3 475 aaPredicted RBP2.54□□□□□ -2
SCN7A-201ENST00000409855 AKAP2Q9Y2D5 859 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 MINK1Q8N4C8 1332 aaPredicted RBP2.54□□□□□ -2
SCN7A-201ENST00000409855 FGD6Q6ZV73 1430 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 ARAP1Q96P48 1450 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 EIF4G3O43432 1585 aaKnown RBP2.54□□□□□ -2
SCN7A-201ENST00000409855 ZBTB24O43167 697 aaPredicted RBP2.54□□□□□ -2
SCN7A-201ENST00000409855 IFIT2P09913 472 aaKnown RBP2.54□□□□□ -2
SCN7A-201ENST00000409855 KCNA6P17658 529 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 TMC4Q7Z404 712 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 SPDYE4A6NLX3 237 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 GLRX3O76003 335 aaKnown RBP2.54□□□□□ -2
SCN7A-201ENST00000409855 ZKSCAN1P17029 563 aaPredicted RBP2.54□□□□□ -2
SCN7A-201ENST00000409855 RXRBP28702 533 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 EIF6P56537 245 aaKnown RBP2.54□□□□□ -2
SCN7A-201ENST00000409855 SOS1Q07889 1333 aaPredicted RBP2.54□□□□□ -2
SCN7A-201ENST00000409855 TSR1Q2NL82 804 aaKnown RBP2.54□□□□□ -2
SCN7A-201ENST00000409855 HSCBQ8IWL3 235 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 GRIN3BO60391 1043 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 TPM3P06753 285 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 TMEM132AQ24JP5 1023 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 DPY19L2Q6NUT2 758 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.54□□□□□ -2
SCN7A-201ENST00000409855 BCL2L13Q9BXK5 485 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 TRAK1Q9UPV9 953 aa2.54□□□□□ -2
SCN7A-201ENST00000409855 NFE2L2Q16236 605 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 CAVIN4Q5BKX8 364 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 RBM17Q96I25 401 aaKnown RBP2.53□□□□□ -2
SCN7A-201ENST00000409855 CDC5LQ99459 802 aaKnown RBP2.53□□□□□ -2
SCN7A-201ENST00000409855 CABP5Q9NP86 173 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 PIK3R4Q99570 1358 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 HLA-DOAP06340 250 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 NEUROD2Q15784 382 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 CCDC57Q2TAC2 916 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 LRRC45Q96CN5 670 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 ZFYVE16Q7Z3T8 1539 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 MYBBP1AQ9BQG0 1328 aaKnown RBP2.53□□□□□ -2
SCN7A-201ENST00000409855 RFX1P22670 979 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 RFC4P35249 363 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 WASHC4Q2M389 1173 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 CC2D2BQ6DHV5 1058 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 CUL5Q93034 780 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 IPO9Q96P70 1041 aaKnown RBP2.53□□□□□ -2
SCN7A-201ENST00000409855 CRBNQ96SW2 442 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 UTP14AQ9BVJ6 771 aaKnown RBP2.53□□□□□ -2
SCN7A-201ENST00000409855 ANKRD2Q9GZV1 360 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 CCDC70Q6NSX1 233 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 SIRT1Q96EB6 747 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms