RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 NLRP13Q86W25 1043 aa21.16■□□□□ 0.98
SHANK2-204ENST00000409530 PAK3O75914 559 aaPredicted RBP21.15■□□□□ 0.98
SHANK2-204ENST00000409530 PLEKHG5O94827 1062 aa21.15■□□□□ 0.98
SHANK2-204ENST00000409530 C1orf167Q5SNV9 1468 aa21.14■□□□□ 0.97
SHANK2-204ENST00000409530 SENP3-EIF4A1A0A087X0R7 540 aa21.14■□□□□ 0.97
SHANK2-204ENST00000409530 MST1RQ04912 1400 aa21.14■□□□□ 0.97
SHANK2-204ENST00000409530 SOX12O15370 315 aa21.13■□□□□ 0.97
SHANK2-204ENST00000409530 ZNF692Q9BU19 519 aaPredicted RBP21.13■□□□□ 0.97
SHANK2-204ENST00000409530 NSD2O96028 1365 aa21.13■□□□□ 0.97
SHANK2-204ENST00000409530 FBLN1P23142 703 aa21.13■□□□□ 0.97
SHANK2-204ENST00000409530 NUTM2GQ5VZR2 741 aa21.13■□□□□ 0.97
SHANK2-204ENST00000409530 POLR3AO14802 1390 aaPredicted RBP21.13■□□□□ 0.97
SHANK2-204ENST00000409530 FOXO3O43524 673 aa21.12■□□□□ 0.97
SHANK2-204ENST00000409530 TTC21BQ7Z4L5 1316 aa21.12■□□□□ 0.97
SHANK2-204ENST00000409530 BRD4O60885 1362 aaPredicted RBP21.11■□□□□ 0.97
SHANK2-204ENST00000409530 DDX17Q92841 729 aaKnown RBP21.11■□□□□ 0.97
SHANK2-204ENST00000409530 CADPS2Q86UW7 1296 aa21.11■□□□□ 0.97
SHANK2-204ENST00000409530 DCCP43146 1447 aa21.1■□□□□ 0.97
SHANK2-204ENST00000409530 NCOA3Q9Y6Q9 1424 aa21.09■□□□□ 0.97
SHANK2-204ENST00000409530 PSME1Q06323 249 aa21.09■□□□□ 0.97
SHANK2-204ENST00000409530 PIK3C2AO00443 1686 aa21.08■□□□□ 0.97
SHANK2-204ENST00000409530 COG3Q96JB2 828 aa21.08■□□□□ 0.96
SHANK2-204ENST00000409530 PPM1GO15355 546 aaPredicted RBP21.07■□□□□ 0.96
SHANK2-204ENST00000409530 LMOD2Q6P5Q4 547 aa21.07■□□□□ 0.96
SHANK2-204ENST00000409530 KIF1AQ12756 1690 aa21.07■□□□□ 0.96
SHANK2-204ENST00000409530 MTHFSP49914 203 aa21.05■□□□□ 0.96
SHANK2-204ENST00000409530 SSH2Q76I76 1423 aa21.04■□□□□ 0.96
SHANK2-204ENST00000409530 LTBP4Q8N2S1 1624 aa21.04■□□□□ 0.96
SHANK2-204ENST00000409530 ABTB2Q8N961 1025 aa21.04■□□□□ 0.96
SHANK2-204ENST00000409530 HNRNPUQ00839 825 aaKnown RBP eCLIP21.02■□□□□ 0.96
SHANK2-204ENST00000409530 RRS1Q15050 365 aaKnown RBP21.02■□□□□ 0.96
SHANK2-204ENST00000409530 MAP2P11137 1827 aaKnown RBP21.02■□□□□ 0.96
SHANK2-204ENST00000409530 NLRP6P59044 892 aa21.02■□□□□ 0.96
SHANK2-204ENST00000409530 PNISRQ8TF01 805 aaKnown RBP21.02■□□□□ 0.96
SHANK2-204ENST00000409530 TTC21AQ8NDW8 1320 aa21.02■□□□□ 0.95
SHANK2-204ENST00000409530 OVOS2A0A0J9YW53 1432 aa21.01■□□□□ 0.95
SHANK2-204ENST00000409530 OVOS2Q6IE36 1432 aa21.01■□□□□ 0.95
SHANK2-204ENST00000409530 SLAIN2Q9P270 581 aa21.01■□□□□ 0.95
SHANK2-204ENST00000409530 EMILIN1Q9Y6C2 1016 aa21■□□□□ 0.95
SHANK2-204ENST00000409530 WDR43Q15061 677 aaKnown RBP eCLIP20.99■□□□□ 0.95
SHANK2-204ENST00000409530 BRINP3Q76B58 766 aa20.99■□□□□ 0.95
SHANK2-204ENST00000409530 KRT28Q7Z3Y7 464 aa20.99■□□□□ 0.95
SHANK2-204ENST00000409530 MARF1Q9Y4F3 1742 aaKnown RBP20.99■□□□□ 0.95
SHANK2-204ENST00000409530 TRPM3Q9HCF6 1732 aaPredicted RBP20.98■□□□□ 0.95
SHANK2-204ENST00000409530 ZBTB7CA1YPR0 619 aa20.97■□□□□ 0.95
SHANK2-204ENST00000409530 SCAF1Q9H7N4 1312 aaKnown RBP20.97■□□□□ 0.95
SHANK2-204ENST00000409530 SHPRHQ149N8 1683 aa20.96■□□□□ 0.95
SHANK2-204ENST00000409530 CFAP53Q96M91 514 aa20.96■□□□□ 0.95
SHANK2-204ENST00000409530 POLKQ9UBT6 870 aa20.95■□□□□ 0.94
SHANK2-204ENST00000409530 NPHP3Q7Z494 1330 aa20.94■□□□□ 0.94
SHANK2-204ENST00000409530 SALL2Q9Y467 1007 aaPredicted RBP20.94■□□□□ 0.94
SHANK2-204ENST00000409530 ADAMTS8Q9UP79 889 aa20.93■□□□□ 0.94
SHANK2-204ENST00000409530 CCDC146Q8IYE0 955 aa20.93■□□□□ 0.94
SHANK2-204ENST00000409530 U2SURPO15042 1029 aaKnown RBP20.92■□□□□ 0.94
SHANK2-204ENST00000409530 ROBO1Q9Y6N7 1651 aa20.91■□□□□ 0.94
SHANK2-204ENST00000409530 PXDNQ92626 1479 aa20.91■□□□□ 0.94
SHANK2-204ENST00000409530 PEAK1Q9H792 1746 aa20.91■□□□□ 0.94
SHANK2-204ENST00000409530 ALS2Q96Q42 1657 aa20.9■□□□□ 0.94
SHANK2-204ENST00000409530 USP31Q70CQ4 1352 aa20.9■□□□□ 0.94
SHANK2-204ENST00000409530 CENPBP07199 599 aaPredicted RBP20.89■□□□□ 0.94
SHANK2-204ENST00000409530 PIP4K2BP78356 416 aa20.89■□□□□ 0.94
SHANK2-204ENST00000409530 COL3A1P02461 1466 aaPredicted RBP20.89■□□□□ 0.93
SHANK2-204ENST00000409530 LTN1O94822 1766 aa20.89■□□□□ 0.93
SHANK2-204ENST00000409530 AATKQ6ZMQ8 1374 aa20.88■□□□□ 0.93
SHANK2-204ENST00000409530 MAP3K19Q56UN5 1328 aa20.88■□□□□ 0.93
SHANK2-204ENST00000409530 USP54Q70EL1 1684 aa20.88■□□□□ 0.93
SHANK2-204ENST00000409530 TNS3Q68CZ2 1445 aa20.87■□□□□ 0.93
SHANK2-204ENST00000409530 U2AF1L5P0DN76 240 aaPredicted RBP20.87■□□□□ 0.93
SHANK2-204ENST00000409530 U2AF1Q01081 240 aaKnown RBP eCLIP20.87■□□□□ 0.93
SHANK2-204ENST00000409530 CABLES1Q8TDN4 633 aa20.87■□□□□ 0.93
SHANK2-204ENST00000409530 CDK12Q9NYV4 1490 aaPredicted RBP20.87■□□□□ 0.93
SHANK2-204ENST00000409530 DIAPH1O60610 1272 aaKnown RBP20.86■□□□□ 0.93
SHANK2-204ENST00000409530 AMPHP49418 695 aa20.86■□□□□ 0.93
SHANK2-204ENST00000409530 NHSL1Q5SYE7 1610 aa20.86■□□□□ 0.93
SHANK2-204ENST00000409530 SMG6Q86US8 1419 aaKnown RBP20.85■□□□□ 0.93
SHANK2-204ENST00000409530 HSP90AB2PQ58FF8 381 aa20.84■□□□□ 0.93
SHANK2-204ENST00000409530 BLMP54132 1417 aaPredicted RBP20.83■□□□□ 0.93
SHANK2-204ENST00000409530 NFAT5O94916 1531 aa20.83■□□□□ 0.92
SHANK2-204ENST00000409530 MED1Q15648 1581 aaPredicted RBP20.83■□□□□ 0.92
SHANK2-204ENST00000409530 LTV1Q96GA3 475 aaPredicted RBP20.82■□□□□ 0.92
SHANK2-204ENST00000409530 SPATA31A3Q5VYP0 1347 aa20.82■□□□□ 0.92
SHANK2-204ENST00000409530 SBNO1A3KN83 1393 aa20.82■□□□□ 0.92
SHANK2-204ENST00000409530 PHRF1Q9P1Y6 1649 aaKnown RBP20.82■□□□□ 0.92
SHANK2-204ENST00000409530 UBAP1LF5GYI3 381 aa20.81■□□□□ 0.92
SHANK2-204ENST00000409530 NUDCQ9Y266 331 aa20.81■□□□□ 0.92
SHANK2-204ENST00000409530 HMOX1P09601 288 aa20.81■□□□□ 0.92
SHANK2-204ENST00000409530 ZC3H6P61129 1189 aaKnown RBP20.81■□□□□ 0.92
SHANK2-204ENST00000409530 PNPLA6Q8IY17 1366 aa20.8■□□□□ 0.92
SHANK2-204ENST00000409530 GCP02774 474 aa20.8■□□□□ 0.92
SHANK2-204ENST00000409530 SLIT3O75094 1523 aa20.8■□□□□ 0.92
SHANK2-204ENST00000409530 FLT4P35916 1363 aa20.8■□□□□ 0.92
SHANK2-204ENST00000409530 SOS2Q07890 1332 aaPredicted RBP20.79■□□□□ 0.92
SHANK2-204ENST00000409530 HAP1P54257 671 aaPredicted RBP20.78■□□□□ 0.92
SHANK2-204ENST00000409530 USP19O94966 1318 aa20.78■□□□□ 0.92
SHANK2-204ENST00000409530 EIF4A2Q14240 407 aaKnown RBP20.78■□□□□ 0.92
SHANK2-204ENST00000409530 KCNH5Q8NCM2 988 aa20.78■□□□□ 0.92
SHANK2-204ENST00000409530 TOM1O60784 492 aa20.77■□□□□ 0.92
SHANK2-204ENST00000409530 NEUROD2Q15784 382 aa20.77■□□□□ 0.92
SHANK2-204ENST00000409530 RRP7AQ9Y3A4 280 aaKnown RBP20.77■□□□□ 0.92
SHANK2-204ENST00000409530 ARHGEF10O15013 1369 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms