RNA–Protein interactions for RNA: ENST00000408509.1

MIR548F3-201, Transcript of microRNA 548f-3, humanhuman

BASIC

Gene MIR548F3, Length 87 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F3-201ENST00000408509 OIP5O43482 229 aa1.37□□□□□ -2.19
MIR548F3-201ENST00000408509 AKAP8O43823 692 aaKnown RBP1.37□□□□□ -2.19
MIR548F3-201ENST00000408509 H2AFB1P0C5Y9 115 aa1.37□□□□□ -2.19
MIR548F3-201ENST00000408509 H2AFB2P0C5Z0 115 aa1.37□□□□□ -2.19
MIR548F3-201ENST00000408509 ITGA6P23229 1130 aa1.37□□□□□ -2.19
MIR548F3-201ENST00000408509 HDGFP51858 240 aaKnown RBP1.37□□□□□ -2.19
MIR548F3-201ENST00000408509 LINC00114Q6XXX2 140 aa1.37□□□□□ -2.19
MIR548F3-201ENST00000408509 BHLHA9Q7RTU4 235 aa1.37□□□□□ -2.19
MIR548F3-201ENST00000408509 ASIC4Q96FT7 647 aa1.37□□□□□ -2.19
MIR548F3-201ENST00000408509 MYRFLQ96LU7 910 aa1.37□□□□□ -2.19
MIR548F3-201ENST00000408509 SHISA8B8ZZ34 492 aa1.36□□□□□ -2.19
MIR548F3-201ENST00000408509 GNB5O14775 395 aa1.36□□□□□ -2.19
MIR548F3-201ENST00000408509 LCE1EQ5T753 118 aa1.36□□□□□ -2.19
MIR548F3-201ENST00000408509 LCNL1Q6ZST4 164 aa1.36□□□□□ -2.19
MIR548F3-201ENST00000408509 PACS2Q86VP3 889 aa1.36□□□□□ -2.19
MIR548F3-201ENST00000408509 NECTIN2Q92692 538 aa1.36□□□□□ -2.19
MIR548F3-201ENST00000408509 RAPGEFL1Q9UHV5 662 aa1.36□□□□□ -2.19
MIR548F3-201ENST00000408509 PIK3R2O00459 728 aa1.35□□□□□ -2.19
MIR548F3-201ENST00000408509 CHRM1P11229 460 aaPredicted RBP1.35□□□□□ -2.19
MIR548F3-201ENST00000408509 MBIPQ9NS73 344 aa1.35□□□□□ -2.19
MIR548F3-201ENST00000408509 NOP53Q9NZM5 478 aaKnown RBP1.35□□□□□ -2.19
MIR548F3-201ENST00000408509 ADGRE2Q9UHX3 823 aa1.35□□□□□ -2.19
MIR548F3-201ENST00000408509 ECM1Q16610 540 aa1.34□□□□□ -2.19
MIR548F3-201ENST00000408509 RELTQ969Z4 430 aa1.34□□□□□ -2.19
MIR548F3-201ENST00000408509 TRERF1Q96PN7 1200 aa1.34□□□□□ -2.19
MIR548F3-201ENST00000408509 OSBPP22059 807 aa1.33□□□□□ -2.2
MIR548F3-201ENST00000408509 TRIM32Q13049 653 aa1.33□□□□□ -2.2
MIR548F3-201ENST00000408509 ZNF800Q2TB10 664 aaPredicted RBP eCLIP1.33□□□□□ -2.2
MIR548F3-201ENST00000408509 RC3H1Q5TC82 1133 aaKnown RBP1.33□□□□□ -2.2
MIR548F3-201ENST00000408509 RNF19BQ6ZMZ0 732 aa1.33□□□□□ -2.2
MIR548F3-201ENST00000408509 LRRC4BQ9NT99 713 aa1.33□□□□□ -2.2
MIR548F3-201ENST00000408509 INHBBP09529 407 aa1.32□□□□□ -2.2
MIR548F3-201ENST00000408509 BMP2P12643 396 aa1.32□□□□□ -2.2
MIR548F3-201ENST00000408509 AMPD1P23109 780 aa1.32□□□□□ -2.2
MIR548F3-201ENST00000408509 GIGYF2Q6Y7W6 1299 aaKnown RBP1.32□□□□□ -2.2
MIR548F3-201ENST00000408509 BORCS6Q96GS4 357 aa1.32□□□□□ -2.2
MIR548F3-201ENST00000408509 CD97P48960 835 aa1.31□□□□□ -2.2
MIR548F3-201ENST00000408509 VWCEQ96DN2 955 aa1.31□□□□□ -2.2
MIR548F3-201ENST00000408509 TSKSQ9UJT2 592 aa1.31□□□□□ -2.2
MIR548F3-201ENST00000408509 TNFRSF18Q9Y5U5 241 aa1.31□□□□□ -2.2
MIR548F3-201ENST00000408509 SOS2Q07890 1332 aaPredicted RBP1.31□□□□□ -2.2
MIR548F3-201ENST00000408509 ADAMTS4O75173 837 aa1.3□□□□□ -2.2
MIR548F3-201ENST00000408509 ZSCAN22P10073 491 aaPredicted RBP1.3□□□□□ -2.2
MIR548F3-201ENST00000408509 OXER1Q8TDS5 423 aa1.3□□□□□ -2.2
MIR548F3-201ENST00000408509 ZNF764Q96H86 408 aaPredicted RBP1.3□□□□□ -2.2
MIR548F3-201ENST00000408509 SLC35F4A4IF30 521 aa1.29□□□□□ -2.2
MIR548F3-201ENST00000408509 FIGNL2A6NMB9 653 aa1.29□□□□□ -2.2
MIR548F3-201ENST00000408509 CFPP27918 469 aa1.29□□□□□ -2.2
MIR548F3-201ENST00000408509 KSR1Q8IVT5 923 aa1.29□□□□□ -2.2
MIR548F3-201ENST00000408509 SENP3-EIF4A1A0A087X0R7 540 aa1.28□□□□□ -2.2
MIR548F3-201ENST00000408509 GPR25O00155 361 aa1.28□□□□□ -2.2
MIR548F3-201ENST00000408509 MED26O95402 600 aa1.28□□□□□ -2.2
MIR548F3-201ENST00000408509 APBA3O96018 575 aa1.28□□□□□ -2.2
MIR548F3-201ENST00000408509 HOXB4P17483 251 aaPredicted RBP1.28□□□□□ -2.2
MIR548F3-201ENST00000408509 NFKB2Q00653 900 aa1.28□□□□□ -2.2
MIR548F3-201ENST00000408509 CRB2Q5IJ48 1285 aa1.28□□□□□ -2.2
MIR548F3-201ENST00000408509 PRRT2Q7Z6L0 340 aaPredicted RBP1.28□□□□□ -2.2
MIR548F3-201ENST00000408509 SLF2Q8IX21 1173 aa1.28□□□□□ -2.2
MIR548F3-201ENST00000408509 ZSCAN18Q8TBC5 510 aaPredicted RBP1.28□□□□□ -2.2
MIR548F3-201ENST00000408509 C20orf173Q96LM9 149 aa1.28□□□□□ -2.2
MIR548F3-201ENST00000408509 PCDHGA10Q9Y5H3 936 aa1.28□□□□□ -2.2
MIR548F3-201ENST00000408509 FOXD2O60548 495 aaPredicted RBP1.27□□□□□ -2.21
MIR548F3-201ENST00000408509 SPATA31C1P0DKV0 1188 aa1.27□□□□□ -2.21
MIR548F3-201ENST00000408509 TIMP2P16035 220 aa1.27□□□□□ -2.21
MIR548F3-201ENST00000408509 HMGA2P52926 109 aa1.27□□□□□ -2.21
MIR548F3-201ENST00000408509 WDR4P57081 412 aaKnown RBP1.27□□□□□ -2.21
MIR548F3-201ENST00000408509 FOXK1P85037 733 aa1.27□□□□□ -2.21
MIR548F3-201ENST00000408509 GSE1Q14687 1217 aa1.27□□□□□ -2.21
MIR548F3-201ENST00000408509 ZXDCQ2QGD7 858 aaPredicted RBP1.27□□□□□ -2.21
MIR548F3-201ENST00000408509 C1orf229Q6ZS94 237 aaPredicted RBP1.27□□□□□ -2.21
MIR548F3-201ENST00000408509 TOX2Q96NM4 488 aa1.27□□□□□ -2.21
MIR548F3-201ENST00000408509 SPSB2Q99619 263 aa1.27□□□□□ -2.21
MIR548F3-201ENST00000408509 NR1I2O75469 434 aa1.26□□□□□ -2.21
MIR548F3-201ENST00000408509 FARP2O94887 1054 aaPredicted RBP1.26□□□□□ -2.21
MIR548F3-201ENST00000408509 UPP2O95045 317 aa1.26□□□□□ -2.21
MIR548F3-201ENST00000408509 ERFEQ4G0M1 354 aa1.26□□□□□ -2.21
MIR548F3-201ENST00000408509 C6orf132Q5T0Z8 1188 aa1.26□□□□□ -2.21
MIR548F3-201ENST00000408509 SIAH1Q8IUQ4 282 aa1.26□□□□□ -2.21
MIR548F3-201ENST00000408509 TP53INP1Q96A56 240 aa1.26□□□□□ -2.21
MIR548F3-201ENST00000408509 EVI5O60447 810 aa1.25□□□□□ -2.21
MIR548F3-201ENST00000408509 NLRP6P59044 892 aa1.25□□□□□ -2.21
MIR548F3-201ENST00000408509 SWT1Q5T5J6 900 aaKnown RBP1.25□□□□□ -2.21
MIR548F3-201ENST00000408509 LRRC56Q8IYG6 542 aaPredicted RBP1.25□□□□□ -2.21
MIR548F3-201ENST00000408509 EDARADDQ8WWZ3 215 aa1.25□□□□□ -2.21
MIR548F3-201ENST00000408509 OXCT2Q9BYC2 517 aaPredicted RBP1.25□□□□□ -2.21
MIR548F3-201ENST00000408509 C3orf80F5H4A9 247 aa1.24□□□□□ -2.21
MIR548F3-201ENST00000408509 HOXA5P20719 270 aa1.24□□□□□ -2.21
MIR548F3-201ENST00000408509 LMO1P25800 156 aa1.24□□□□□ -2.21
MIR548F3-201ENST00000408509 SKOR1P84550 965 aa1.24□□□□□ -2.21
MIR548F3-201ENST00000408509 PUM1Q14671 1186 aaKnown RBP eCLIP1.24□□□□□ -2.21
MIR548F3-201ENST00000408509 TYW1BQ6NUM6 668 aa1.24□□□□□ -2.21
MIR548F3-201ENST00000408509 C1QL4Q86Z23 238 aa1.24□□□□□ -2.21
MIR548F3-201ENST00000408509 SRRDQ9UH36 339 aa1.24□□□□□ -2.21
MIR548F3-201ENST00000408509 PNMA3Q9UL41 463 aa1.24□□□□□ -2.21
MIR548F3-201ENST00000408509 TTLL8A6PVC2 850 aa1.23□□□□□ -2.21
MIR548F3-201ENST00000408509 KIAA1324LA8MWY0 1029 aaPredicted RBP1.23□□□□□ -2.21
MIR548F3-201ENST00000408509 NNTQ13423 1086 aa1.23□□□□□ -2.21
MIR548F3-201ENST00000408509 DSG2Q14126 1118 aa1.23□□□□□ -2.21
MIR548F3-201ENST00000408509 TRIM41Q8WV44 630 aa1.23□□□□□ -2.21
MIR548F3-201ENST00000408509 FBXW7Q969H0 707 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms