RNA–Protein interactions for RNA: ENST00000407521.7

PRDM2-205, Transcript of PR/SET domain 2, humanhuman

TSL 4

Gene PRDM2, Length 513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-205ENST00000407521 SLIT2O94813 1529 aa16.34■□□□□ 0.21
PRDM2-205ENST00000407521 NUDT16Q96DE0 195 aaKnown RBP16.33■□□□□ 0.2
PRDM2-205ENST00000407521 CDK19Q9BWU1 502 aa16.33■□□□□ 0.2
PRDM2-205ENST00000407521 QTRT2Q9H974 415 aaKnown RBP16.33■□□□□ 0.2
PRDM2-205ENST00000407521 USP21Q9UK80 565 aa16.33■□□□□ 0.2
PRDM2-205ENST00000407521 PHRF1Q9P1Y6 1649 aaKnown RBP16.33■□□□□ 0.2
PRDM2-205ENST00000407521 RBM6P78332 1123 aaKnown RBP16.32■□□□□ 0.2
PRDM2-205ENST00000407521 GPRASP1Q5JY77 1395 aa16.32■□□□□ 0.2
PRDM2-205ENST00000407521 NRAPQ86VF7 1730 aa16.32■□□□□ 0.2
PRDM2-205ENST00000407521 POLR3AO14802 1390 aaPredicted RBP16.31■□□□□ 0.2
PRDM2-205ENST00000407521 ROCK2O75116 1388 aaKnown RBP16.31■□□□□ 0.2
PRDM2-205ENST00000407521 NBPF8Q3BBV2 869 aa16.31■□□□□ 0.2
PRDM2-205ENST00000407521 TRPC5Q9UL62 973 aaPredicted RBP16.3■□□□□ 0.2
PRDM2-205ENST00000407521 GLI3P10071 1580 aa16.3■□□□□ 0.2
PRDM2-205ENST00000407521 RALGAPBQ86X10 1494 aa16.29■□□□□ 0.2
PRDM2-205ENST00000407521 NGDNQ8NEJ9 315 aaKnown RBP16.29■□□□□ 0.2
PRDM2-205ENST00000407521 CABLES1Q8TDN4 633 aa16.29■□□□□ 0.2
PRDM2-205ENST00000407521 COL14A1Q05707 1796 aaKnown RBP16.28■□□□□ 0.2
PRDM2-205ENST00000407521 CCDC61Q9Y6R9 512 aa16.28■□□□□ 0.2
PRDM2-205ENST00000407521 AKAP12Q02952 1782 aa16.28■□□□□ 0.2
PRDM2-205ENST00000407521 LMOD2Q6P5Q4 547 aa16.27■□□□□ 0.2
PRDM2-205ENST00000407521 PPIP5K1Q6PFW1 1433 aa16.27■□□□□ 0.19
PRDM2-205ENST00000407521 BRWD3Q6RI45 1802 aa16.26■□□□□ 0.19
PRDM2-205ENST00000407521 PLEKHG3A1L390 1219 aa16.26■□□□□ 0.19
PRDM2-205ENST00000407521 ACEP12821 1306 aa16.25■□□□□ 0.19
PRDM2-205ENST00000407521 TIMELESSQ9UNS1 1208 aa16.25■□□□□ 0.19
PRDM2-205ENST00000407521 NRKQ7Z2Y5 1582 aa16.25■□□□□ 0.19
PRDM2-205ENST00000407521 HAP1P54257 671 aaPredicted RBP16.24■□□□□ 0.19
PRDM2-205ENST00000407521 UNC5CLQ8IV45 518 aa16.24■□□□□ 0.19
PRDM2-205ENST00000407521 CABP2Q9NPB3 220 aa16.24■□□□□ 0.19
PRDM2-205ENST00000407521 PLEKHG5O94827 1062 aa16.23■□□□□ 0.19
PRDM2-205ENST00000407521 SRPK2P78362 688 aaKnown RBP16.23■□□□□ 0.19
PRDM2-205ENST00000407521 UPF1Q92900 1129 aaKnown RBP eCLIP16.23■□□□□ 0.19
PRDM2-205ENST00000407521 GJD4Q96KN9 370 aaPredicted RBP16.22■□□□□ 0.19
PRDM2-205ENST00000407521 SBNO2Q9Y2G9 1366 aa16.22■□□□□ 0.19
PRDM2-205ENST00000407521 PAK3O75914 559 aaPredicted RBP16.21■□□□□ 0.19
PRDM2-205ENST00000407521 MON2Q7Z3U7 1717 aa16.21■□□□□ 0.19
PRDM2-205ENST00000407521 PIK3C2AO00443 1686 aa16.21■□□□□ 0.18
PRDM2-205ENST00000407521 EVC2Q86UK5 1308 aa16.2■□□□□ 0.18
PRDM2-205ENST00000407521 FAM83GA6ND36 823 aa16.2■□□□□ 0.18
PRDM2-205ENST00000407521 USP6P35125 1406 aa16.19■□□□□ 0.18
PRDM2-205ENST00000407521 BRD4O60885 1362 aaPredicted RBP16.19■□□□□ 0.18
PRDM2-205ENST00000407521 LMO7Q8WWI1 1683 aa16.18■□□□□ 0.18
PRDM2-205ENST00000407521 VPS72Q15906 364 aa16.18■□□□□ 0.18
PRDM2-205ENST00000407521 CARD11Q9BXL7 1154 aa16.18■□□□□ 0.18
PRDM2-205ENST00000407521 SSH2Q76I76 1423 aa16.18■□□□□ 0.18
PRDM2-205ENST00000407521 CABP1Q9NZU7 370 aa16.17■□□□□ 0.18
PRDM2-205ENST00000407521 USP19O94966 1318 aa16.17■□□□□ 0.18
PRDM2-205ENST00000407521 ATAD2Q6PL18 1390 aa16.16■□□□□ 0.18
PRDM2-205ENST00000407521 SLIT3O75094 1523 aa16.16■□□□□ 0.18
PRDM2-205ENST00000407521 KIAA0232Q92628 1395 aa16.15■□□□□ 0.18
PRDM2-205ENST00000407521 NUTM2GQ5VZR2 741 aa16.15■□□□□ 0.18
PRDM2-205ENST00000407521 BTG4Q9NY30 223 aa16.15■□□□□ 0.18
PRDM2-205ENST00000407521 USP54Q70EL1 1684 aa16.14■□□□□ 0.18
PRDM2-205ENST00000407521 THSD7AQ9UPZ6 1657 aa16.14■□□□□ 0.18
PRDM2-205ENST00000407521 EP400Q96L91 3159 aa16.14■□□□□ 0.17
PRDM2-205ENST00000407521 CPSF1Q10570 1443 aaKnown RBP16.13■□□□□ 0.17
PRDM2-205ENST00000407521 ABTB2Q8N961 1025 aa16.13■□□□□ 0.17
PRDM2-205ENST00000407521 COL18A1P39060 1754 aa16.13■□□□□ 0.17
PRDM2-205ENST00000407521 CPDO75976 1380 aa16.13■□□□□ 0.17
PRDM2-205ENST00000407521 CD163L1Q9NR16 1453 aa16.12■□□□□ 0.17
PRDM2-205ENST00000407521 PRDM11Q9NQV5 511 aa16.12■□□□□ 0.17
PRDM2-205ENST00000407521 CAMTA1Q9Y6Y1 1673 aa16.11■□□□□ 0.17
PRDM2-205ENST00000407521 ONECUT3O60422 494 aaPredicted RBP16.11■□□□□ 0.17
PRDM2-205ENST00000407521 ZC3H6P61129 1189 aaKnown RBP16.1■□□□□ 0.17
PRDM2-205ENST00000407521 CHRNA2Q15822 529 aa16.1■□□□□ 0.17
PRDM2-205ENST00000407521 NLRP13Q86W25 1043 aa16.1■□□□□ 0.17
PRDM2-205ENST00000407521 RGPD5Q99666 1765 aa16.1■□□□□ 0.17
PRDM2-205ENST00000407521 SEPT12Q8IYM1 358 aa16.09■□□□□ 0.17
PRDM2-205ENST00000407521 CCDC9Q9Y3X0 531 aaKnown RBP16.09■□□□□ 0.17
PRDM2-205ENST00000407521 SPATA31A5Q5VU36 1347 aa16.09■□□□□ 0.17
PRDM2-205ENST00000407521 SPATA31A7Q8IWB4 1347 aa16.09■□□□□ 0.17
PRDM2-205ENST00000407521 ZNF692Q9BU19 519 aaPredicted RBP16.08■□□□□ 0.16
PRDM2-205ENST00000407521 TTC21BQ7Z4L5 1316 aa16.08■□□□□ 0.16
PRDM2-205ENST00000407521 WNK3Q9BYP7 1800 aa16.08■□□□□ 0.16
PRDM2-205ENST00000407521 GCP02774 474 aa16.07■□□□□ 0.16
PRDM2-205ENST00000407521 TESK2Q96S53 571 aa16.07■□□□□ 0.16
PRDM2-205ENST00000407521 RNF39Q9H2S5 420 aa16.07■□□□□ 0.16
PRDM2-205ENST00000407521 NFAT5O94916 1531 aa16.06■□□□□ 0.16
PRDM2-205ENST00000407521 KTN1Q86UP2 1357 aaKnown RBP16.06■□□□□ 0.16
PRDM2-205ENST00000407521 TTC21AQ8NDW8 1320 aa16.06■□□□□ 0.16
PRDM2-205ENST00000407521 COL5A2P05997 1499 aaPredicted RBP16.05■□□□□ 0.16
PRDM2-205ENST00000407521 SPATA31A1Q5TZJ5 1347 aa16.05■□□□□ 0.16
PRDM2-205ENST00000407521 ST20-MTHFSA0A0A6YYL1 179 aa16.05■□□□□ 0.16
PRDM2-205ENST00000407521 NLRP6P59044 892 aa16.05■□□□□ 0.16
PRDM2-205ENST00000407521 FAM98CQ17RN3 349 aaKnown RBP16.05■□□□□ 0.16
PRDM2-205ENST00000407521 PUS7Q96PZ0 661 aaKnown RBP16.05■□□□□ 0.16
PRDM2-205ENST00000407521 LTN1O94822 1766 aa16.05■□□□□ 0.16
PRDM2-205ENST00000407521 USP47Q96K76 1375 aa16.04■□□□□ 0.16
PRDM2-205ENST00000407521 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
PRDM2-205ENST00000407521 PARP4Q9UKK3 1724 aaKnown RBP16.04■□□□□ 0.16
PRDM2-205ENST00000407521 RGPD1P0DJD0 1748 aa16.03■□□□□ 0.16
PRDM2-205ENST00000407521 STRN4Q9NRL3 753 aa16.03■□□□□ 0.16
PRDM2-205ENST00000407521 A0A1W2PP64 1363 aa16.02■□□□□ 0.16
PRDM2-205ENST00000407521 KRT27Q7Z3Y8 459 aa16.02■□□□□ 0.16
PRDM2-205ENST00000407521 ABCC6O95255 1503 aa16.02■□□□□ 0.15
PRDM2-205ENST00000407521 TNS1Q9HBL0 1735 aaKnown RBP16.02■□□□□ 0.15
PRDM2-205ENST00000407521 BLMP54132 1417 aaPredicted RBP16.02■□□□□ 0.15
PRDM2-205ENST00000407521 EDC4Q6P2E9 1401 aaKnown RBP16.02■□□□□ 0.15
PRDM2-205ENST00000407521 MYOM1P52179 1685 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms