RNA–Protein interactions for RNA: ENST00000407089.2

SPTLC1P2-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 2, humanhuman

BASIC

Gene SPTLC1P2, Length 121 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P2-201ENST00000407089 CHD4Q14839 1912 aa8.24□□□□□ -1.09
SPTLC1P2-201ENST00000407089 COL14A1Q05707 1796 aaKnown RBP8.23□□□□□ -1.09
SPTLC1P2-201ENST00000407089 CLTCL1P53675 1640 aa8.23□□□□□ -1.09
SPTLC1P2-201ENST00000407089 PLSCR1O15162 318 aa8.23□□□□□ -1.09
SPTLC1P2-201ENST00000407089 ABCC11Q96J66 1382 aa8.22□□□□□ -1.09
SPTLC1P2-201ENST00000407089 MYOM1P52179 1685 aa8.22□□□□□ -1.09
SPTLC1P2-201ENST00000407089 BARGINQ6ZT62 677 aa8.22□□□□□ -1.09
SPTLC1P2-201ENST00000407089 PMFBP1Q8TBY8 1022 aa8.22□□□□□ -1.09
SPTLC1P2-201ENST00000407089 PRDM11Q9NQV5 511 aa8.22□□□□□ -1.09
SPTLC1P2-201ENST00000407089 FMN2Q9NZ56 1722 aa8.22□□□□□ -1.09
SPTLC1P2-201ENST00000407089 ROCK1Q13464 1354 aa8.22□□□□□ -1.09
SPTLC1P2-201ENST00000407089 TECPR2O15040 1411 aa8.21□□□□□ -1.09
SPTLC1P2-201ENST00000407089 NRXN1Q9ULB1 1477 aa8.21□□□□□ -1.09
SPTLC1P2-201ENST00000407089 CASZ1Q86V15 1759 aa8.21□□□□□ -1.1
SPTLC1P2-201ENST00000407089 GPR162Q16538 588 aa8.21□□□□□ -1.1
SPTLC1P2-201ENST00000407089 TMEM132EQ6IEE7 984 aa8.21□□□□□ -1.1
SPTLC1P2-201ENST00000407089 PROM2Q8N271 834 aa8.21□□□□□ -1.1
SPTLC1P2-201ENST00000407089 SGIP1Q9BQI5 828 aa8.21□□□□□ -1.1
SPTLC1P2-201ENST00000407089 STRN4Q9NRL3 753 aa8.21□□□□□ -1.1
SPTLC1P2-201ENST00000407089 USP35Q9P2H5 1018 aa8.21□□□□□ -1.1
SPTLC1P2-201ENST00000407089 CHRNA2Q15822 529 aa8.2□□□□□ -1.1
SPTLC1P2-201ENST00000407089 SIRT1Q96EB6 747 aa8.2□□□□□ -1.1
SPTLC1P2-201ENST00000407089 BCL11BQ9C0K0 894 aaPredicted RBP8.2□□□□□ -1.1
SPTLC1P2-201ENST00000407089 RGPD8O14715 1765 aaPredicted RBP8.2□□□□□ -1.1
SPTLC1P2-201ENST00000407089 C11orf95C9JLR9 678 aaPredicted RBP8.19□□□□□ -1.1
SPTLC1P2-201ENST00000407089 HSPA6P17066 643 aa8.19□□□□□ -1.1
SPTLC1P2-201ENST00000407089 EVA1CP58658 441 aa8.19□□□□□ -1.1
SPTLC1P2-201ENST00000407089 ARXQ96QS3 562 aa8.19□□□□□ -1.1
SPTLC1P2-201ENST00000407089 MTFR1LQ9H019 292 aa8.19□□□□□ -1.1
SPTLC1P2-201ENST00000407089 ADGRF5Q8IZF2 1346 aa8.19□□□□□ -1.1
SPTLC1P2-201ENST00000407089 KIF1BO60333 1816 aa8.19□□□□□ -1.1
SPTLC1P2-201ENST00000407089 LOC105371045A0A1W2PR82 267 aa8.18□□□□□ -1.1
SPTLC1P2-201ENST00000407089 PTF1AQ7RTS3 328 aa8.18□□□□□ -1.1
SPTLC1P2-201ENST00000407089 TCP11L2Q8N4U5 519 aa8.18□□□□□ -1.1
SPTLC1P2-201ENST00000407089 KIAA0232Q92628 1395 aa8.18□□□□□ -1.1
SPTLC1P2-201ENST00000407089 DLC1Q96QB1 1528 aa8.18□□□□□ -1.1
SPTLC1P2-201ENST00000407089 ZC3H6P61129 1189 aaKnown RBP8.17□□□□□ -1.1
SPTLC1P2-201ENST00000407089 SLC15A2Q16348 729 aa8.17□□□□□ -1.1
SPTLC1P2-201ENST00000407089 LARP1Q6PKG0 1096 aaKnown RBP8.17□□□□□ -1.1
SPTLC1P2-201ENST00000407089 STK32BQ9NY57 414 aa8.17□□□□□ -1.1
SPTLC1P2-201ENST00000407089 GPRASP1Q5JY77 1395 aa8.16□□□□□ -1.1
SPTLC1P2-201ENST00000407089 MAP3K5Q99683 1374 aa8.16□□□□□ -1.1
SPTLC1P2-201ENST00000407089 SHANK3Q9BYB0 1731 aa8.15□□□□□ -1.1
SPTLC1P2-201ENST00000407089 TRPM3Q9HCF6 1732 aaPredicted RBP8.15□□□□□ -1.1
SPTLC1P2-201ENST00000407089 ALS2Q96Q42 1657 aa8.15□□□□□ -1.1
SPTLC1P2-201ENST00000407089 SSH2Q76I76 1423 aa8.15□□□□□ -1.1
SPTLC1P2-201ENST00000407089 YTHDC2Q9H6S0 1430 aaKnown RBP8.15□□□□□ -1.1
SPTLC1P2-201ENST00000407089 ACIN1Q9UKV3 1341 aaKnown RBP8.15□□□□□ -1.1
SPTLC1P2-201ENST00000407089 PAK3O75914 559 aaPredicted RBP8.15□□□□□ -1.1
SPTLC1P2-201ENST00000407089 THRAP3Q9Y2W1 955 aaKnown RBP8.15□□□□□ -1.1
SPTLC1P2-201ENST00000407089 PPLO60437 1756 aa8.15□□□□□ -1.11
SPTLC1P2-201ENST00000407089 ITGAEP38570 1179 aa8.14□□□□□ -1.11
SPTLC1P2-201ENST00000407089 SAFB2Q14151 953 aaKnown RBP eCLIP8.14□□□□□ -1.11
SPTLC1P2-201ENST00000407089 TXNRD1Q16881 649 aa8.14□□□□□ -1.11
SPTLC1P2-201ENST00000407089 PELP1Q8IZL8 1130 aaKnown RBP8.14□□□□□ -1.11
SPTLC1P2-201ENST00000407089 IFT172Q9UG01 1749 aa8.14□□□□□ -1.11
SPTLC1P2-201ENST00000407089 ANKARQ7Z5J8 1434 aa8.13□□□□□ -1.11
SPTLC1P2-201ENST00000407089 RGPD3A6NKT7 1758 aaPredicted RBP8.13□□□□□ -1.11
SPTLC1P2-201ENST00000407089 RGPD4Q7Z3J3 1758 aa8.13□□□□□ -1.11
SPTLC1P2-201ENST00000407089 CRYBG1Q9Y4K1 1723 aa8.13□□□□□ -1.11
SPTLC1P2-201ENST00000407089 OVOS2A0A0G2JMS6 1433 aa8.12□□□□□ -1.11
SPTLC1P2-201ENST00000407089 OVOS2A0A0J9YW53 1432 aa8.12□□□□□ -1.11
SPTLC1P2-201ENST00000407089 OVOS2Q6IE36 1432 aa8.12□□□□□ -1.11
SPTLC1P2-201ENST00000407089 KNDC1Q76NI1 1749 aa8.12□□□□□ -1.11
SPTLC1P2-201ENST00000407089 DHX57Q6P158 1386 aaKnown RBP8.12□□□□□ -1.11
SPTLC1P2-201ENST00000407089 CAPN15O75808 1086 aa8.12□□□□□ -1.11
SPTLC1P2-201ENST00000407089 RGL3Q3MIN7 710 aa8.12□□□□□ -1.11
SPTLC1P2-201ENST00000407089 DNAJC5GQ8N7S2 189 aa8.12□□□□□ -1.11
SPTLC1P2-201ENST00000407089 NGDNQ8NEJ9 315 aaKnown RBP8.12□□□□□ -1.11
SPTLC1P2-201ENST00000407089 PRAM1Q96QH2 718 aa8.12□□□□□ -1.11
SPTLC1P2-201ENST00000407089 GPBP1L1Q9HC44 474 aaPredicted RBP8.12□□□□□ -1.11
SPTLC1P2-201ENST00000407089 PEAK1Q9H792 1746 aa8.12□□□□□ -1.11
SPTLC1P2-201ENST00000407089 PRR36Q9H6K5 1346 aa8.11□□□□□ -1.11
SPTLC1P2-201ENST00000407089 GRIN3BO60391 1043 aa8.11□□□□□ -1.11
SPTLC1P2-201ENST00000407089 COL13A1Q5TAT6 717 aaPredicted RBP8.11□□□□□ -1.11
SPTLC1P2-201ENST00000407089 NUTM2GQ5VZR2 741 aa8.11□□□□□ -1.11
SPTLC1P2-201ENST00000407089 MARCH10Q8NA82 808 aaPredicted RBP8.11□□□□□ -1.11
SPTLC1P2-201ENST00000407089 C14orf93Q9H972 538 aaKnown RBP8.11□□□□□ -1.11
SPTLC1P2-201ENST00000407089 ATP10DQ9P241 1426 aa8.11□□□□□ -1.11
SPTLC1P2-201ENST00000407089 ANKRD30BQ9BXX2 1392 aa8.1□□□□□ -1.11
SPTLC1P2-201ENST00000407089 YBX3P16989 372 aaKnown RBP eCLIP8.1□□□□□ -1.11
SPTLC1P2-201ENST00000407089 PRELPP51888 382 aa8.1□□□□□ -1.11
SPTLC1P2-201ENST00000407089 DDB1Q16531 1140 aa8.1□□□□□ -1.11
SPTLC1P2-201ENST00000407089 KLHL34Q8N239 644 aa8.1□□□□□ -1.11
SPTLC1P2-201ENST00000407089 NLGN2Q8NFZ4 835 aa8.1□□□□□ -1.11
SPTLC1P2-201ENST00000407089 POGKQ9P215 609 aa8.1□□□□□ -1.11
SPTLC1P2-201ENST00000407089 SBF2Q86WG5 1849 aa8.1□□□□□ -1.11
SPTLC1P2-201ENST00000407089 PARP4Q9UKK3 1724 aaKnown RBP8.09□□□□□ -1.11
SPTLC1P2-201ENST00000407089 ATP7BP35670 1465 aa8.09□□□□□ -1.11
SPTLC1P2-201ENST00000407089 HIRIP3Q9BW71 556 aaPredicted RBP8.09□□□□□ -1.11
SPTLC1P2-201ENST00000407089 PIK3C2GO75747 1445 aa8.09□□□□□ -1.11
SPTLC1P2-201ENST00000407089 SLC34A2O95436 690 aa8.08□□□□□ -1.12
SPTLC1P2-201ENST00000407089 APLP1P51693 650 aa8.08□□□□□ -1.12
SPTLC1P2-201ENST00000407089 CFAP70Q5T0N1 1121 aa8.08□□□□□ -1.12
SPTLC1P2-201ENST00000407089 BCL9O00512 1426 aa8.08□□□□□ -1.12
SPTLC1P2-201ENST00000407089 CRB1P82279 1406 aa8.07□□□□□ -1.12
SPTLC1P2-201ENST00000407089 WASLO00401 505 aaPredicted RBP8.07□□□□□ -1.12
SPTLC1P2-201ENST00000407089 POLD1P28340 1107 aa8.07□□□□□ -1.12
SPTLC1P2-201ENST00000407089 ZNF526Q8TF50 670 aaPredicted RBP8.07□□□□□ -1.12
SPTLC1P2-201ENST00000407089 SLC16A10Q8TF71 515 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms