RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 DISP2A7MBM2 1401 aa14.16□□□□□ -0.14
NUP43-204ENST00000403890 CLTCL1P53675 1640 aa14.16□□□□□ -0.14
NUP43-204ENST00000403890 LMOD2Q6P5Q4 547 aa14.15□□□□□ -0.14
NUP43-204ENST00000403890 CAMKK2Q96RR4 588 aa14.15□□□□□ -0.14
NUP43-204ENST00000403890 STK26Q9P289 416 aa14.15□□□□□ -0.14
NUP43-204ENST00000403890 NWD2Q9ULI1 1742 aa14.15□□□□□ -0.14
NUP43-204ENST00000403890 ITGAEP38570 1179 aa14.14□□□□□ -0.15
NUP43-204ENST00000403890 TNS3Q68CZ2 1445 aa14.14□□□□□ -0.15
NUP43-204ENST00000403890 BTG4Q9NY30 223 aa14.13□□□□□ -0.15
NUP43-204ENST00000403890 PHF8Q9UPP1 1060 aa14.13□□□□□ -0.15
NUP43-204ENST00000403890 KIF1BO60333 1816 aa14.13□□□□□ -0.15
NUP43-204ENST00000403890 RGPD1P0DJD0 1748 aa14.12□□□□□ -0.15
NUP43-204ENST00000403890 SBNO1A3KN83 1393 aa14.12□□□□□ -0.15
NUP43-204ENST00000403890 ARHGEF10O15013 1369 aa14.12□□□□□ -0.15
NUP43-204ENST00000403890 PLCH1Q4KWH8 1693 aa14.12□□□□□ -0.15
NUP43-204ENST00000403890 TRIM37O94972 964 aa14.11□□□□□ -0.15
NUP43-204ENST00000403890 PPP1R1BQ9UD71 204 aaPredicted RBP14.11□□□□□ -0.15
NUP43-204ENST00000403890 PARD3Q8TEW0 1356 aa14.1□□□□□ -0.15
NUP43-204ENST00000403890 APBA3O96018 575 aa14.1□□□□□ -0.15
NUP43-204ENST00000403890 PRR29P0C7W0 189 aa14.1□□□□□ -0.15
NUP43-204ENST00000403890 EVX2Q03828 476 aa14.1□□□□□ -0.15
NUP43-204ENST00000403890 NBPF8Q3BBV2 869 aa14.1□□□□□ -0.15
NUP43-204ENST00000403890 NBPF14Q5TI25 921 aa14.1□□□□□ -0.15
NUP43-204ENST00000403890 FAM196AQ6ZSG2 479 aa14.1□□□□□ -0.15
NUP43-204ENST00000403890 SPON1Q9HCB6 807 aa14.1□□□□□ -0.15
NUP43-204ENST00000403890 KIF1AQ12756 1690 aa14.1□□□□□ -0.15
NUP43-204ENST00000403890 SPATA31A5Q5VU36 1347 aa14.1□□□□□ -0.15
NUP43-204ENST00000403890 SPATA31A7Q8IWB4 1347 aa14.1□□□□□ -0.15
NUP43-204ENST00000403890 ABCC11Q96J66 1382 aa14.09□□□□□ -0.15
NUP43-204ENST00000403890 TECPR2O15040 1411 aa14.09□□□□□ -0.15
NUP43-204ENST00000403890 PLEKHH1Q9ULM0 1364 aa14.09□□□□□ -0.15
NUP43-204ENST00000403890 C19orf67A6NJJ6 358 aa14.08□□□□□ -0.16
NUP43-204ENST00000403890 KCNQ2O43526 872 aa14.07□□□□□ -0.16
NUP43-204ENST00000403890 IFFO2Q5TF58 517 aa14.07□□□□□ -0.16
NUP43-204ENST00000403890 TMEM132EQ6IEE7 984 aa14.07□□□□□ -0.16
NUP43-204ENST00000403890 ADGRF5Q8IZF2 1346 aa14.07□□□□□ -0.16
NUP43-204ENST00000403890 NINLQ9Y2I6 1382 aa14.07□□□□□ -0.16
NUP43-204ENST00000403890 FMN2Q9NZ56 1722 aa14.06□□□□□ -0.16
NUP43-204ENST00000403890 TNS1Q9HBL0 1735 aaKnown RBP14.05□□□□□ -0.16
NUP43-204ENST00000403890 ZNF784Q8NCA9 323 aaPredicted RBP14.05□□□□□ -0.16
NUP43-204ENST00000403890 SIRT1Q96EB6 747 aa14.05□□□□□ -0.16
NUP43-204ENST00000403890 ADGRB2O60241 1585 aa14.05□□□□□ -0.16
NUP43-204ENST00000403890 SENP3-EIF4A1A0A087X0R7 540 aa14.04□□□□□ -0.16
NUP43-204ENST00000403890 NRXN1Q9ULB1 1477 aa14.04□□□□□ -0.16
NUP43-204ENST00000403890 NRAPQ86VF7 1730 aa14.04□□□□□ -0.16
NUP43-204ENST00000403890 PPLO60437 1756 aa14.03□□□□□ -0.16
NUP43-204ENST00000403890 ABCA3Q99758 1704 aa14.02□□□□□ -0.16
NUP43-204ENST00000403890 SPATA31A1Q5TZJ5 1347 aa14.02□□□□□ -0.17
NUP43-204ENST00000403890 PMFBP1Q8TBY8 1022 aa14.02□□□□□ -0.17
NUP43-204ENST00000403890 THSD7AQ9UPZ6 1657 aa14.01□□□□□ -0.17
NUP43-204ENST00000403890 RRBP1Q9P2E9 1410 aaKnown RBP14.01□□□□□ -0.17
NUP43-204ENST00000403890 PDE3BQ13370 1112 aa14.01□□□□□ -0.17
NUP43-204ENST00000403890 PRDM11Q9NQV5 511 aa14.01□□□□□ -0.17
NUP43-204ENST00000403890 COL14A1Q05707 1796 aaKnown RBP14.01□□□□□ -0.17
NUP43-204ENST00000403890 YTHDC2Q9H6S0 1430 aaKnown RBP14□□□□□ -0.17
NUP43-204ENST00000403890 RGL3Q3MIN7 710 aa14□□□□□ -0.17
NUP43-204ENST00000403890 RGPD8O14715 1765 aaPredicted RBP13.99□□□□□ -0.17
NUP43-204ENST00000403890 ANKRD30BQ9BXX2 1392 aa13.99□□□□□ -0.17
NUP43-204ENST00000403890 C1QTNF8P60827 252 aa13.99□□□□□ -0.17
NUP43-204ENST00000403890 GPRASP1Q5JY77 1395 aa13.98□□□□□ -0.17
NUP43-204ENST00000403890 SAFB2Q14151 953 aaKnown RBP eCLIP13.97□□□□□ -0.17
NUP43-204ENST00000403890 STRN4Q9NRL3 753 aa13.97□□□□□ -0.17
NUP43-204ENST00000403890 KNDC1Q76NI1 1749 aa13.97□□□□□ -0.17
NUP43-204ENST00000403890 BARGINQ6ZT62 677 aa13.96□□□□□ -0.17
NUP43-204ENST00000403890 USP35Q9P2H5 1018 aa13.96□□□□□ -0.17
NUP43-204ENST00000403890 ANKARQ7Z5J8 1434 aa13.96□□□□□ -0.18
NUP43-204ENST00000403890 RREB1Q92766 1687 aa13.95□□□□□ -0.18
NUP43-204ENST00000403890 CHADLQ6NUI6 762 aa13.95□□□□□ -0.18
NUP43-204ENST00000403890 PRAM1Q96QH2 718 aa13.95□□□□□ -0.18
NUP43-204ENST00000403890 NUP188Q5SRE5 1749 aa13.95□□□□□ -0.18
NUP43-204ENST00000403890 IFT172Q9UG01 1749 aa13.95□□□□□ -0.18
NUP43-204ENST00000403890 ACIN1Q9UKV3 1341 aaKnown RBP13.94□□□□□ -0.18
NUP43-204ENST00000403890 PAK3O75914 559 aaPredicted RBP13.94□□□□□ -0.18
NUP43-204ENST00000403890 EVA1CP58658 441 aa13.94□□□□□ -0.18
NUP43-204ENST00000403890 CHRNA2Q15822 529 aa13.94□□□□□ -0.18
NUP43-204ENST00000403890 C14orf93Q9H972 538 aaKnown RBP13.94□□□□□ -0.18
NUP43-204ENST00000403890 DHX57Q6P158 1386 aaKnown RBP13.94□□□□□ -0.18
NUP43-204ENST00000403890 PIK3C2GO75747 1445 aa13.93□□□□□ -0.18
NUP43-204ENST00000403890 POGKQ9P215 609 aa13.93□□□□□ -0.18
NUP43-204ENST00000403890 CAMTA1Q9Y6Y1 1673 aa13.93□□□□□ -0.18
NUP43-204ENST00000403890 KIAA0232Q92628 1395 aa13.93□□□□□ -0.18
NUP43-204ENST00000403890 C11orf95C9JLR9 678 aaPredicted RBP13.92□□□□□ -0.18
NUP43-204ENST00000403890 NGDNQ8NEJ9 315 aaKnown RBP13.92□□□□□ -0.18
NUP43-204ENST00000403890 TRPM3Q9HCF6 1732 aaPredicted RBP13.92□□□□□ -0.18
NUP43-204ENST00000403890 SPATA31E1Q6ZUB1 1445 aa13.91□□□□□ -0.18
NUP43-204ENST00000403890 UTRNP46939 3433 aa13.91□□□□□ -0.18
NUP43-204ENST00000403890 PLSCR1O15162 318 aa13.91□□□□□ -0.18
NUP43-204ENST00000403890 ZC3H6P61129 1189 aaKnown RBP13.91□□□□□ -0.18
NUP43-204ENST00000403890 TCP11L2Q8N4U5 519 aa13.91□□□□□ -0.18
NUP43-204ENST00000403890 ALS2Q96Q42 1657 aa13.91□□□□□ -0.18
NUP43-204ENST00000403890 GABBR2O75899 941 aa13.9□□□□□ -0.18
NUP43-204ENST00000403890 CFAP70Q5T0N1 1121 aa13.9□□□□□ -0.18
NUP43-204ENST00000403890 ZBTB7AO95365 584 aa13.89□□□□□ -0.19
NUP43-204ENST00000403890 PTGER2P43116 358 aa13.89□□□□□ -0.19
NUP43-204ENST00000403890 SYT17Q9BSW7 474 aa13.89□□□□□ -0.19
NUP43-204ENST00000403890 PDGFDQ9GZP0 370 aaPredicted RBP13.89□□□□□ -0.19
NUP43-204ENST00000403890 CLCN6P51797 869 aa13.88□□□□□ -0.19
NUP43-204ENST00000403890 LARP1Q6PKG0 1096 aaKnown RBP13.88□□□□□ -0.19
NUP43-204ENST00000403890 HIRIP3Q9BW71 556 aaPredicted RBP13.88□□□□□ -0.19
NUP43-204ENST00000403890 ANO8Q9HCE9 1232 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms