RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 UCN2Q96RP3 112 aa7.25□□□□□ -1.25
HMGB1P17-201ENST00000403495 NUDT12Q9BQG2 462 aa7.25□□□□□ -1.25
HMGB1P17-201ENST00000403495 FKBPLQ9UIM3 349 aa7.25□□□□□ -1.25
HMGB1P17-201ENST00000403495 CCNYL3P0C7X3 344 aa7.24□□□□□ -1.25
HMGB1P17-201ENST00000403495 CFAP70Q5T0N1 1121 aa7.24□□□□□ -1.25
HMGB1P17-201ENST00000403495 CCDC24Q8N4L8 307 aa7.24□□□□□ -1.25
HMGB1P17-201ENST00000403495 NKX2-3Q8TAU0 364 aa7.24□□□□□ -1.25
HMGB1P17-201ENST00000403495 ADH1BP00325 375 aa7.23□□□□□ -1.25
HMGB1P17-201ENST00000403495 MMP16P51512 607 aa7.23□□□□□ -1.25
HMGB1P17-201ENST00000403495 CDCA8Q53HL2 280 aa7.23□□□□□ -1.25
HMGB1P17-201ENST00000403495 PTCRAQ6ISU1 281 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P17-201ENST00000403495 RETREG2Q8NC44 543 aa7.23□□□□□ -1.25
HMGB1P17-201ENST00000403495 PPP1R12CQ9BZL4 782 aa7.23□□□□□ -1.25
HMGB1P17-201ENST00000403495 PALM3A6NDB9 673 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P17-201ENST00000403495 PIK3CDO00329 1044 aa7.22□□□□□ -1.25
HMGB1P17-201ENST00000403495 PDIA4P13667 645 aaKnown RBP7.22□□□□□ -1.25
HMGB1P17-201ENST00000403495 KCNH2Q12809 1159 aa7.22□□□□□ -1.25
HMGB1P17-201ENST00000403495 NR1H3Q13133 447 aa7.22□□□□□ -1.25
HMGB1P17-201ENST00000403495 SEMA3FQ13275 785 aa7.22□□□□□ -1.25
HMGB1P17-201ENST00000403495 TJAP1Q5JTD0 557 aa7.22□□□□□ -1.25
HMGB1P17-201ENST00000403495 EVA1BQ9NVM1 165 aa7.22□□□□□ -1.25
HMGB1P17-201ENST00000403495 TFIP11Q9UBB9 837 aaKnown RBP7.22□□□□□ -1.25
HMGB1P17-201ENST00000403495 ZBBXA8MT70 800 aa7.21□□□□□ -1.26
HMGB1P17-201ENST00000403495 LMOD1P29536 600 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P17-201ENST00000403495 TBC1D9Q6ZT07 1266 aa7.21□□□□□ -1.26
HMGB1P17-201ENST00000403495 OCSTAMPQ9BR26 566 aa7.21□□□□□ -1.26
HMGB1P17-201ENST00000403495 CARNS1A5YM72 827 aa7.2□□□□□ -1.26
HMGB1P17-201ENST00000403495 S1PR4O95977 384 aa7.2□□□□□ -1.26
HMGB1P17-201ENST00000403495 PNMA1Q8ND90 353 aa7.2□□□□□ -1.26
HMGB1P17-201ENST00000403495 EIF4G2P78344 907 aaKnown RBP eCLIP7.19□□□□□ -1.26
HMGB1P17-201ENST00000403495 SLC6A16Q9GZN6 736 aa7.19□□□□□ -1.26
HMGB1P17-201ENST00000403495 UNC93B1Q9H1C4 597 aa7.19□□□□□ -1.26
HMGB1P17-201ENST00000403495 IL21Q9HBE4 155 aa7.19□□□□□ -1.26
HMGB1P17-201ENST00000403495 MYT1LQ9UL68 1186 aa7.19□□□□□ -1.26
HMGB1P17-201ENST00000403495 PPEF1O14829 653 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P17-201ENST00000403495 LINC01559Q495D7 138 aa7.18□□□□□ -1.26
HMGB1P17-201ENST00000403495 PODXL2Q9NZ53 605 aa7.18□□□□□ -1.26
HMGB1P17-201ENST00000403495 NYAP1Q6ZVC0 841 aa7.17□□□□□ -1.26
HMGB1P17-201ENST00000403495 PBXIP1Q96AQ6 731 aa7.17□□□□□ -1.26
HMGB1P17-201ENST00000403495 CARD14Q9BXL6 1004 aa7.17□□□□□ -1.26
HMGB1P17-201ENST00000403495 FCF1Q9Y324 198 aaKnown RBP7.17□□□□□ -1.26
HMGB1P17-201ENST00000403495 PCDHB9Q9Y5E1 797 aa7.17□□□□□ -1.26
HMGB1P17-201ENST00000403495 MAFBQ9Y5Q3 323 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P17-201ENST00000403495 SOX11P35716 441 aa7.16□□□□□ -1.26
HMGB1P17-201ENST00000403495 SRPK2P78362 688 aaKnown RBP7.16□□□□□ -1.26
HMGB1P17-201ENST00000403495 DEPDC4Q8N2C3 294 aa7.16□□□□□ -1.26
HMGB1P17-201ENST00000403495 FAM174AQ8TBP5 190 aa7.16□□□□□ -1.26
HMGB1P17-201ENST00000403495 BAP1Q92560 729 aa7.16□□□□□ -1.26
HMGB1P17-201ENST00000403495 MAGEB6P1A0A0J9YX57 407 aa7.15□□□□□ -1.26
HMGB1P17-201ENST00000403495 PTK2Q05397 1052 aa7.15□□□□□ -1.26
HMGB1P17-201ENST00000403495 ADAM32Q8TC27 787 aa7.15□□□□□ -1.26
HMGB1P17-201ENST00000403495 ARHGAP9Q9BRR9 750 aa7.15□□□□□ -1.26
HMGB1P17-201ENST00000403495 ZC3H4Q9UPT8 1303 aaKnown RBP7.15□□□□□ -1.26
HMGB1P17-201ENST00000403495 ATP9BO43861 1147 aa7.14□□□□□ -1.27
HMGB1P17-201ENST00000403495 SKIP12755 728 aa7.14□□□□□ -1.27
HMGB1P17-201ENST00000403495 NBPF14Q5TI25 921 aa7.14□□□□□ -1.27
HMGB1P17-201ENST00000403495 PDXDC2PQ6P474 469 aa7.14□□□□□ -1.27
HMGB1P17-201ENST00000403495 FOXJ1Q92949 421 aa7.14□□□□□ -1.27
HMGB1P17-201ENST00000403495 ACIN1Q9UKV3 1341 aaKnown RBP7.13□□□□□ -1.27
HMGB1P17-201ENST00000403495 PPP1R15AO75807 674 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P17-201ENST00000403495 SH3BP5LQ7L8J4 393 aa7.13□□□□□ -1.27
HMGB1P17-201ENST00000403495 AEBP1Q8IUX7 1158 aa7.13□□□□□ -1.27
HMGB1P17-201ENST00000403495 ARMC2Q8NEN0 867 aa7.13□□□□□ -1.27
HMGB1P17-201ENST00000403495 AGERQ15109 404 aa7.12□□□□□ -1.27
HMGB1P17-201ENST00000403495 TSGA10IPQ3SY00 556 aa7.12□□□□□ -1.27
HMGB1P17-201ENST00000403495 C4orf48Q5BLP8 95 aa7.12□□□□□ -1.27
HMGB1P17-201ENST00000403495 ZBTB33Q86T24 672 aa7.12□□□□□ -1.27
HMGB1P17-201ENST00000403495 CEP126Q9P2H0 1117 aa7.12□□□□□ -1.27
HMGB1P17-201ENST00000403495 USP17L3A6NCW0 530 aa7.11□□□□□ -1.27
HMGB1P17-201ENST00000403495 USP17L4A6NCW7 530 aa7.11□□□□□ -1.27
HMGB1P17-201ENST00000403495 USP17L5A8MUK1 530 aa7.11□□□□□ -1.27
HMGB1P17-201ENST00000403495 PLA2G2CQ5R387 149 aa7.11□□□□□ -1.27
HMGB1P17-201ENST00000403495 USP17L2Q6R6M4 530 aa7.11□□□□□ -1.27
HMGB1P17-201ENST00000403495 USP17L1Q7RTZ2 530 aa7.11□□□□□ -1.27
HMGB1P17-201ENST00000403495 TRAIPQ9BWF2 469 aa7.11□□□□□ -1.27
HMGB1P17-201ENST00000403495 SLFNL1Q499Z3 407 aa7.1□□□□□ -1.27
HMGB1P17-201ENST00000403495 KANK4Q5T7N3 995 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P17-201ENST00000403495 RNF135Q8IUD6 432 aa7.1□□□□□ -1.27
HMGB1P17-201ENST00000403495 ZNF511Q8NB15 262 aa7.1□□□□□ -1.27
HMGB1P17-201ENST00000403495 GPKOWQ92917 476 aaPredicted RBP eCLIP7.1□□□□□ -1.27
HMGB1P17-201ENST00000403495 RNF166Q96A37 237 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P17-201ENST00000403495 GPSM3Q9Y4H4 160 aa7.1□□□□□ -1.27
HMGB1P17-201ENST00000403495 RNF223E7ERA6 249 aa7.09□□□□□ -1.27
HMGB1P17-201ENST00000403495 DZIP3Q86Y13 1208 aaKnown RBP7.09□□□□□ -1.27
HMGB1P17-201ENST00000403495 GIGYF1O75420 1035 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P17-201ENST00000403495 CSB-PGBD3P0DP91 1061 aa7.08□□□□□ -1.28
HMGB1P17-201ENST00000403495 SH3BP2P78314 561 aa7.08□□□□□ -1.28
HMGB1P17-201ENST00000403495 KCNC4Q03721 635 aa7.08□□□□□ -1.28
HMGB1P17-201ENST00000403495 NCOA4Q13772 614 aa7.08□□□□□ -1.28
HMGB1P17-201ENST00000403495 ERFEQ4G0M1 354 aa7.08□□□□□ -1.28
HMGB1P17-201ENST00000403495 SH3RF1Q7Z6J0 888 aa7.08□□□□□ -1.28
HMGB1P17-201ENST00000403495 PHTF2Q8N3S3 785 aa7.08□□□□□ -1.28
HMGB1P17-201ENST00000403495 PLPP7Q8NBV4 271 aa7.08□□□□□ -1.28
HMGB1P17-201ENST00000403495 VRTNQ9H8Y1 702 aa7.08□□□□□ -1.28
HMGB1P17-201ENST00000403495 ZBTB7CA1YPR0 619 aa7.07□□□□□ -1.28
HMGB1P17-201ENST00000403495 RAB15P59190 212 aa7.07□□□□□ -1.28
HMGB1P17-201ENST00000403495 STK32AQ8WU08 396 aa7.07□□□□□ -1.28
HMGB1P17-201ENST00000403495 CCDC85AQ96PX6 553 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P17-201ENST00000403495 HCSTQ9UBK5 93 aa7.07□□□□□ -1.28
HMGB1P17-201ENST00000403495 ATG7O95352 703 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms