RNA–Protein interactions for RNA: ENST00000402802.7

PDGFA-203, Transcript of platelet derived growth factor subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFA, Length 2,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-203ENST00000402802 PRR36Q9H6K5 1346 aa20.83■□□□□ 0.93
PDGFA-203ENST00000402802 EXOC6Q8TAG9 804 aa20.83■□□□□ 0.93
PDGFA-203ENST00000402802 FRAT1Q92837 279 aaPredicted RBP20.83■□□□□ 0.93
PDGFA-203ENST00000402802 GGNBP2Q9H3C7 697 aa20.83■□□□□ 0.93
PDGFA-203ENST00000402802 FAM43AQ8N2R8 423 aa20.83■□□□□ 0.92
PDGFA-203ENST00000402802 TERF2IPQ9NYB0 399 aa20.82■□□□□ 0.92
PDGFA-203ENST00000402802 PPIP5K1Q6PFW1 1433 aa20.81■□□□□ 0.92
PDGFA-203ENST00000402802 NINLQ9Y2I6 1382 aa20.81■□□□□ 0.92
PDGFA-203ENST00000402802 HDGFL2Q7Z4V5 671 aaPredicted RBP20.81■□□□□ 0.92
PDGFA-203ENST00000402802 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.81■□□□□ 0.92
PDGFA-203ENST00000402802 DIP2AQ14689 1571 aa20.79■□□□□ 0.92
PDGFA-203ENST00000402802 ADAMTS8Q9UP79 889 aa20.78■□□□□ 0.92
PDGFA-203ENST00000402802 FYB1O15117 783 aa20.77■□□□□ 0.92
PDGFA-203ENST00000402802 ATP7BP35670 1465 aa20.77■□□□□ 0.92
PDGFA-203ENST00000402802 USP32Q8NFA0 1604 aa20.77■□□□□ 0.91
PDGFA-203ENST00000402802 PTCH1Q13635 1447 aa20.76■□□□□ 0.91
PDGFA-203ENST00000402802 CCDC61Q9Y6R9 512 aa20.76■□□□□ 0.91
PDGFA-203ENST00000402802 XRN1Q8IZH2 1706 aaKnown RBP20.76■□□□□ 0.91
PDGFA-203ENST00000402802 KDM4FA0A1W2PPD8 638 aa20.76■□□□□ 0.91
PDGFA-203ENST00000402802 RCAN3Q9UKA8 241 aa20.75■□□□□ 0.91
PDGFA-203ENST00000402802 NPHP4O75161 1426 aaPredicted RBP20.75■□□□□ 0.91
PDGFA-203ENST00000402802 HSPA2P54652 639 aa20.75■□□□□ 0.91
PDGFA-203ENST00000402802 FBLN1P23142 703 aa20.74■□□□□ 0.91
PDGFA-203ENST00000402802 WDR43Q15061 677 aaKnown RBP eCLIP20.73■□□□□ 0.91
PDGFA-203ENST00000402802 ZRANB1Q9UGI0 708 aa20.73■□□□□ 0.91
PDGFA-203ENST00000402802 MTHFSP49914 203 aa20.72■□□□□ 0.91
PDGFA-203ENST00000402802 ADGRB2O60241 1585 aa20.72■□□□□ 0.91
PDGFA-203ENST00000402802 PMFBP1Q8TBY8 1022 aa20.71■□□□□ 0.91
PDGFA-203ENST00000402802 NME9Q86XW9 330 aa20.71■□□□□ 0.91
PDGFA-203ENST00000402802 CCDC146Q8IYE0 955 aa20.71■□□□□ 0.91
PDGFA-203ENST00000402802 CPSF1Q10570 1443 aaKnown RBP20.71■□□□□ 0.91
PDGFA-203ENST00000402802 NSD2O96028 1365 aa20.7■□□□□ 0.9
PDGFA-203ENST00000402802 PIK3R4Q99570 1358 aa20.7■□□□□ 0.9
PDGFA-203ENST00000402802 DAXXQ9UER7 740 aaPredicted RBP20.7■□□□□ 0.9
PDGFA-203ENST00000402802 NKTRP30414 1462 aaKnown RBP20.69■□□□□ 0.9
PDGFA-203ENST00000402802 CDC42BPGQ6DT37 1551 aa20.68■□□□□ 0.9
PDGFA-203ENST00000402802 BLMP54132 1417 aaPredicted RBP20.68■□□□□ 0.9
PDGFA-203ENST00000402802 CHD2O14647 1828 aaKnown RBP20.68■□□□□ 0.9
PDGFA-203ENST00000402802 ACEP12821 1306 aa20.68■□□□□ 0.9
PDGFA-203ENST00000402802 PDE3BQ13370 1112 aa20.68■□□□□ 0.9
PDGFA-203ENST00000402802 POLR3AO14802 1390 aaPredicted RBP20.66■□□□□ 0.9
PDGFA-203ENST00000402802 EDC4Q6P2E9 1401 aaKnown RBP20.65■□□□□ 0.9
PDGFA-203ENST00000402802 RGPD8O14715 1765 aaPredicted RBP20.64■□□□□ 0.9
PDGFA-203ENST00000402802 KIF20BQ96Q89 1820 aa20.64■□□□□ 0.9
PDGFA-203ENST00000402802 TOPAZ1Q8N9V7 1692 aa20.63■□□□□ 0.89
PDGFA-203ENST00000402802 GLIPR1L2Q4G1C9 344 aa20.63■□□□□ 0.89
PDGFA-203ENST00000402802 PLEKHG3A1L390 1219 aa20.62■□□□□ 0.89
PDGFA-203ENST00000402802 ITSN1Q15811 1721 aa20.62■□□□□ 0.89
PDGFA-203ENST00000402802 NALCNQ8IZF0 1738 aa20.62■□□□□ 0.89
PDGFA-203ENST00000402802 SLC4A3P48751 1232 aa20.61■□□□□ 0.89
PDGFA-203ENST00000402802 C14orf37Q86TY3 774 aa20.61■□□□□ 0.89
PDGFA-203ENST00000402802 MON2Q7Z3U7 1717 aa20.61■□□□□ 0.89
PDGFA-203ENST00000402802 ANKRD26Q9UPS8 1709 aa20.61■□□□□ 0.89
PDGFA-203ENST00000402802 AKAP12Q02952 1782 aa20.61■□□□□ 0.89
PDGFA-203ENST00000402802 CDCA7LQ96GN5 454 aa20.61■□□□□ 0.89
PDGFA-203ENST00000402802 SHPRHQ149N8 1683 aa20.6■□□□□ 0.89
PDGFA-203ENST00000402802 FRAT2O75474 233 aaPredicted RBP20.59■□□□□ 0.89
PDGFA-203ENST00000402802 NGDNQ8NEJ9 315 aaKnown RBP20.59■□□□□ 0.89
PDGFA-203ENST00000402802 ZNF692Q9BU19 519 aaPredicted RBP20.59■□□□□ 0.89
PDGFA-203ENST00000402802 TTC21BQ7Z4L5 1316 aa20.59■□□□□ 0.89
PDGFA-203ENST00000402802 CFAP53Q96M91 514 aa20.59■□□□□ 0.89
PDGFA-203ENST00000402802 APAF1O14727 1248 aa20.58■□□□□ 0.88
PDGFA-203ENST00000402802 USP6P35125 1406 aa20.57■□□□□ 0.88
PDGFA-203ENST00000402802 EMILIN1Q9Y6C2 1016 aa20.57■□□□□ 0.88
PDGFA-203ENST00000402802 COG3Q96JB2 828 aa20.56■□□□□ 0.88
PDGFA-203ENST00000402802 POLKQ9UBT6 870 aa20.56■□□□□ 0.88
PDGFA-203ENST00000402802 SOX12O15370 315 aa20.56■□□□□ 0.88
PDGFA-203ENST00000402802 RRS1Q15050 365 aaKnown RBP20.56■□□□□ 0.88
PDGFA-203ENST00000402802 PROSER2Q86WR7 435 aaPredicted RBP20.56■□□□□ 0.88
PDGFA-203ENST00000402802 INSRP06213 1382 aa20.56■□□□□ 0.88
PDGFA-203ENST00000402802 FMN2Q9NZ56 1722 aa20.55■□□□□ 0.88
PDGFA-203ENST00000402802 U2SURPO15042 1029 aaKnown RBP20.55■□□□□ 0.88
PDGFA-203ENST00000402802 PLEKHG5O94827 1062 aa20.54■□□□□ 0.88
PDGFA-203ENST00000402802 U2AF1L5P0DN76 240 aaPredicted RBP20.54■□□□□ 0.88
PDGFA-203ENST00000402802 U2AF1Q01081 240 aaKnown RBP eCLIP20.54■□□□□ 0.88
PDGFA-203ENST00000402802 LMTK3Q96Q04 1460 aa20.54■□□□□ 0.88
PDGFA-203ENST00000402802 ADGRL3Q9HAR2 1447 aa20.54■□□□□ 0.88
PDGFA-203ENST00000402802 FAM161AQ3B820 660 aa20.54■□□□□ 0.88
PDGFA-203ENST00000402802 NRKQ7Z2Y5 1582 aa20.54■□□□□ 0.88
PDGFA-203ENST00000402802 KDM2BQ8NHM5 1336 aa20.53■□□□□ 0.88
PDGFA-203ENST00000402802 CRBNQ96SW2 442 aa20.53■□□□□ 0.88
PDGFA-203ENST00000402802 RRP7AQ9Y3A4 280 aaKnown RBP20.53■□□□□ 0.88
PDGFA-203ENST00000402802 COL3A1P02461 1466 aaPredicted RBP20.53■□□□□ 0.88
PDGFA-203ENST00000402802 NUTM2GQ5VZR2 741 aa20.52■□□□□ 0.88
PDGFA-203ENST00000402802 NEUROD2Q15784 382 aa20.52■□□□□ 0.87
PDGFA-203ENST00000402802 SKAP1Q86WV1 359 aa20.52■□□□□ 0.87
PDGFA-203ENST00000402802 ANKARQ7Z5J8 1434 aa20.51■□□□□ 0.87
PDGFA-203ENST00000402802 NWD1Q149M9 1564 aa20.51■□□□□ 0.87
PDGFA-203ENST00000402802 ESCO1Q5FWF5 840 aa20.51■□□□□ 0.87
PDGFA-203ENST00000402802 SSH2Q76I76 1423 aa20.5■□□□□ 0.87
PDGFA-203ENST00000402802 C8orf34Q49A92 452 aa20.5■□□□□ 0.87
PDGFA-203ENST00000402802 MAP2P11137 1827 aaKnown RBP20.5■□□□□ 0.87
PDGFA-203ENST00000402802 CENPQQ7L2Z9 268 aaPredicted RBP20.49■□□□□ 0.87
PDGFA-203ENST00000402802 ORAI2Q96SN7 254 aa20.49■□□□□ 0.87
PDGFA-203ENST00000402802 PHF8Q9UPP1 1060 aa20.49■□□□□ 0.87
PDGFA-203ENST00000402802 PODXL2Q9NZ53 605 aa20.49■□□□□ 0.87
PDGFA-203ENST00000402802 STRCP1A6NGW2 1772 aa20.49■□□□□ 0.87
PDGFA-203ENST00000402802 RRAGDQ9NQL2 400 aaPredicted RBP20.48■□□□□ 0.87
PDGFA-203ENST00000402802 PLIN1O60240 522 aa20.48■□□□□ 0.87
PDGFA-203ENST00000402802 DIAPH1O60610 1272 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms