RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 RBM25P49756 843 aaKnown RBP18.1■□□□□ 0.49
ITSN1-210ENST00000399353 TRMT2AQ8IZ69 625 aaKnown RBP18.1■□□□□ 0.49
ITSN1-210ENST00000399353 ADCY5O95622 1261 aa18.1■□□□□ 0.49
ITSN1-210ENST00000399353 UTP14CQ5TAP6 766 aaKnown RBP18.1■□□□□ 0.49
ITSN1-210ENST00000399353 GPT2Q8TD30 523 aa18.1■□□□□ 0.49
ITSN1-210ENST00000399353 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.1■□□□□ 0.49
ITSN1-210ENST00000399353 RABEP1Q15276 862 aa18.09■□□□□ 0.49
ITSN1-210ENST00000399353 HCLS1P14317 486 aaPredicted RBP18.08■□□□□ 0.49
ITSN1-210ENST00000399353 PZPP20742 1482 aa18.08■□□□□ 0.49
ITSN1-210ENST00000399353 CCDC27Q2M243 656 aa18.08■□□□□ 0.48
ITSN1-210ENST00000399353 DNMBPQ6XZF7 1577 aa18.07■□□□□ 0.48
ITSN1-210ENST00000399353 SOX12O15370 315 aa18.07■□□□□ 0.48
ITSN1-210ENST00000399353 PRIMPOLQ96LW4 560 aa18.07■□□□□ 0.48
ITSN1-210ENST00000399353 DTNBO60941 627 aa18.07■□□□□ 0.48
ITSN1-210ENST00000399353 PHF14O94880 888 aa18.07■□□□□ 0.48
ITSN1-210ENST00000399353 MBD3O95983 291 aa18.07■□□□□ 0.48
ITSN1-210ENST00000399353 CAMSAP2Q08AD1 1489 aa18.07■□□□□ 0.48
ITSN1-210ENST00000399353 C16orf45Q96MC5 204 aaPredicted RBP18.06■□□□□ 0.48
ITSN1-210ENST00000399353 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.06■□□□□ 0.48
ITSN1-210ENST00000399353 V9GYY5 206 aaPredicted RBP18.06■□□□□ 0.48
ITSN1-210ENST00000399353 NINLQ9Y2I6 1382 aa18.06■□□□□ 0.48
ITSN1-210ENST00000399353 TROQ12816 1431 aaPredicted RBP18.06■□□□□ 0.48
ITSN1-210ENST00000399353 RIOK3O14730 519 aaKnown RBP18.05■□□□□ 0.48
ITSN1-210ENST00000399353 SLC12A5Q9H2X9 1139 aa18.05■□□□□ 0.48
ITSN1-210ENST00000399353 EFCAB2Q5VUJ9 269 aa18.05■□□□□ 0.48
ITSN1-210ENST00000399353 TMEM132EQ6IEE7 984 aa18.05■□□□□ 0.48
ITSN1-210ENST00000399353 FIBPO43427 364 aa18.04■□□□□ 0.48
ITSN1-210ENST00000399353 SPAG9O60271 1321 aaKnown RBP18.03■□□□□ 0.48
ITSN1-210ENST00000399353 KDM5CP41229 1560 aa18.03■□□□□ 0.48
ITSN1-210ENST00000399353 NUCB1Q02818 461 aa18.03■□□□□ 0.48
ITSN1-210ENST00000399353 BMP2KLQ5H9B9 411 aa18.03■□□□□ 0.48
ITSN1-210ENST00000399353 ZNF710Q8N1W2 664 aa18.03■□□□□ 0.48
ITSN1-210ENST00000399353 RSPH4AQ5TD94 716 aa18.03■□□□□ 0.48
ITSN1-210ENST00000399353 NGEFQ8N5V2 710 aa18.03■□□□□ 0.48
ITSN1-210ENST00000399353 ERCC6Q03468 1493 aa18.02■□□□□ 0.48
ITSN1-210ENST00000399353 NLRP1Q9C000 1473 aa18.02■□□□□ 0.48
ITSN1-210ENST00000399353 PLPPR3Q6T4P5 718 aa18.02■□□□□ 0.48
ITSN1-210ENST00000399353 ABCA5Q8WWZ7 1642 aa18.02■□□□□ 0.48
ITSN1-210ENST00000399353 MAGI3Q5TCQ9 1506 aa18.02■□□□□ 0.47
ITSN1-210ENST00000399353 CCDC66A2RUB6 948 aa18.02■□□□□ 0.47
ITSN1-210ENST00000399353 C16orf71Q8IYS4 520 aaPredicted RBP18.02■□□□□ 0.47
ITSN1-210ENST00000399353 LARP6Q9BRS8 491 aaKnown RBP18.02■□□□□ 0.47
ITSN1-210ENST00000399353 HDAC1Q13547 482 aaPredicted RBP18.01■□□□□ 0.47
ITSN1-210ENST00000399353 WDR63Q8IWG1 891 aa18.01■□□□□ 0.47
ITSN1-210ENST00000399353 PDLIM2Q96JY6 352 aa18.01■□□□□ 0.47
ITSN1-210ENST00000399353 TRIM6-TRIM34B2RNG4 842 aa18.01■□□□□ 0.47
ITSN1-210ENST00000399353 ZBTB9Q96C00 473 aa18.01■□□□□ 0.47
ITSN1-210ENST00000399353 UPF3BQ9BZI7 483 aaKnown RBP18.01■□□□□ 0.47
ITSN1-210ENST00000399353 GOLGA6L6A8MZA4 724 aa18■□□□□ 0.47
ITSN1-210ENST00000399353 PLB1Q6P1J6 1458 aa18■□□□□ 0.47
ITSN1-210ENST00000399353 ZFP91Q96JP5 570 aaPredicted RBP18■□□□□ 0.47
ITSN1-210ENST00000399353 CWC22Q9HCG8 908 aaKnown RBP18■□□□□ 0.47
ITSN1-210ENST00000399353 KANK1Q14678 1352 aa18■□□□□ 0.47
ITSN1-210ENST00000399353 INTS3Q68E01 1043 aaKnown RBP18■□□□□ 0.47
ITSN1-210ENST00000399353 PIBF1Q8WXW3 757 aa17.99■□□□□ 0.47
ITSN1-210ENST00000399353 SMARCA5O60264 1052 aaPredicted RBP17.99■□□□□ 0.47
ITSN1-210ENST00000399353 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.99■□□□□ 0.47
ITSN1-210ENST00000399353 RTF1Q92541 710 aaKnown RBP17.99■□□□□ 0.47
ITSN1-210ENST00000399353 RILPL2Q969X0 211 aa17.99■□□□□ 0.47
ITSN1-210ENST00000399353 ANO2Q9NQ90 1003 aa17.99■□□□□ 0.47
ITSN1-210ENST00000399353 GGNBP2Q9H3C7 697 aa17.99■□□□□ 0.47
ITSN1-210ENST00000399353 AFAP1Q8N556 730 aa17.98■□□□□ 0.47
ITSN1-210ENST00000399353 TMEM51Q9NW97 253 aa17.98■□□□□ 0.47
ITSN1-210ENST00000399353 TPD52L1Q16890 204 aaPredicted RBP17.98■□□□□ 0.47
ITSN1-210ENST00000399353 GADD45BO75293 160 aaPredicted RBP17.98■□□□□ 0.47
ITSN1-210ENST00000399353 KIF2CQ99661 725 aa17.98■□□□□ 0.47
ITSN1-210ENST00000399353 NAA30Q147X3 362 aaPredicted RBP17.97■□□□□ 0.47
ITSN1-210ENST00000399353 TAF3Q5VWG9 929 aa17.97■□□□□ 0.47
ITSN1-210ENST00000399353 TRIM34Q9BYJ4 488 aa17.97■□□□□ 0.47
ITSN1-210ENST00000399353 GOLGA6L4A6NEF3 574 aa17.97■□□□□ 0.47
ITSN1-210ENST00000399353 GIMAP6Q6P9H5 292 aa17.97■□□□□ 0.47
ITSN1-210ENST00000399353 CUL7Q14999 1698 aa17.97■□□□□ 0.47
ITSN1-210ENST00000399353 TCOF1Q13428 1488 aaKnown RBP17.97■□□□□ 0.47
ITSN1-210ENST00000399353 CCDC112Q8NEF3 446 aa17.96■□□□□ 0.47
ITSN1-210ENST00000399353 KIAA0586Q9BVV6 1533 aa17.96■□□□□ 0.47
ITSN1-210ENST00000399353 DDIT3P35638 169 aa17.96■□□□□ 0.47
ITSN1-210ENST00000399353 ARHGEF11O15085 1522 aa17.95■□□□□ 0.46
ITSN1-210ENST00000399353 THUMPD2Q9BTF0 503 aaKnown RBP17.95■□□□□ 0.46
ITSN1-210ENST00000399353 CARD14Q9BXL6 1004 aa17.95■□□□□ 0.46
ITSN1-210ENST00000399353 REC8O95072 547 aa17.95■□□□□ 0.46
ITSN1-210ENST00000399353 PTPRGP23470 1445 aa17.95■□□□□ 0.46
ITSN1-210ENST00000399353 IPO4Q8TEX9 1081 aaKnown RBP17.95■□□□□ 0.46
ITSN1-210ENST00000399353 ZBTB40Q9NUA8 1239 aa17.95■□□□□ 0.46
ITSN1-210ENST00000399353 TIGD1Q96MW7 591 aa17.94■□□□□ 0.46
ITSN1-210ENST00000399353 MCCP23508 829 aa17.94■□□□□ 0.46
ITSN1-210ENST00000399353 IQGAP2Q13576 1575 aa17.94■□□□□ 0.46
ITSN1-210ENST00000399353 UHRF1BP1Q6BDS2 1440 aa17.94■□□□□ 0.46
ITSN1-210ENST00000399353 URB2Q14146 1524 aaKnown RBP17.94■□□□□ 0.46
ITSN1-210ENST00000399353 TRIM5Q9C035 493 aa17.93■□□□□ 0.46
ITSN1-210ENST00000399353 CC2D2AQ9P2K1 1620 aa17.93■□□□□ 0.46
ITSN1-210ENST00000399353 TNNT1P13805 278 aa17.93■□□□□ 0.46
ITSN1-210ENST00000399353 GCC1Q96CN9 775 aa17.93■□□□□ 0.46
ITSN1-210ENST00000399353 NPM1P06748 294 aaKnown RBP eCLIP17.92■□□□□ 0.46
ITSN1-210ENST00000399353 CAMK4Q16566 473 aa17.92■□□□□ 0.46
ITSN1-210ENST00000399353 TSHZ3Q63HK5 1081 aa17.92■□□□□ 0.46
ITSN1-210ENST00000399353 USP48Q86UV5 1035 aa17.92■□□□□ 0.46
ITSN1-210ENST00000399353 PYCARDQ9ULZ3 195 aa17.92■□□□□ 0.46
ITSN1-210ENST00000399353 PRAG1Q86YV5 1406 aa17.92■□□□□ 0.46
ITSN1-210ENST00000399353 GPRASP1Q5JY77 1395 aa17.92■□□□□ 0.46
ITSN1-210ENST00000399353 GTF2F1P35269 517 aaKnown RBP eCLIP17.92■□□□□ 0.466e-6■■□□□ 12.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms