RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 SYNE3Q6ZMZ3 975 aa14.12□□□□□ -0.15
PCDHGA8-201ENST00000398604 SHANK2Q9UPX8 1470 aa14.12□□□□□ -0.15
PCDHGA8-201ENST00000398604 CPLX1O14810 134 aa14.12□□□□□ -0.15
PCDHGA8-201ENST00000398604 FYB1O15117 783 aa14.11□□□□□ -0.15
PCDHGA8-201ENST00000398604 GNAI1P63096 354 aa14.11□□□□□ -0.15
PCDHGA8-201ENST00000398604 PRM3Q9NNZ6 103 aa14.11□□□□□ -0.15
PCDHGA8-201ENST00000398604 ABCA8O94911 1581 aa14.11□□□□□ -0.15
PCDHGA8-201ENST00000398604 PRKAR2BP31323 418 aa14.11□□□□□ -0.15
PCDHGA8-201ENST00000398604 CPLX2Q6PUV4 134 aaKnown RBP14.11□□□□□ -0.15
PCDHGA8-201ENST00000398604 ANKLE2Q86XL3 938 aa14.11□□□□□ -0.15
PCDHGA8-201ENST00000398604 KDM5BQ9UGL1 1544 aa14.1□□□□□ -0.15
PCDHGA8-201ENST00000398604 KDM4AO75164 1064 aa14.1□□□□□ -0.15
PCDHGA8-201ENST00000398604 A2MP01023 1474 aa14.1□□□□□ -0.15
PCDHGA8-201ENST00000398604 XPCQ01831 940 aaPredicted RBP14.1□□□□□ -0.15
PCDHGA8-201ENST00000398604 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
PCDHGA8-201ENST00000398604 NOL10Q9BSC4 688 aaKnown RBP14.1□□□□□ -0.15
PCDHGA8-201ENST00000398604 NEO1Q92859 1461 aa14.1□□□□□ -0.15
PCDHGA8-201ENST00000398604 NUTM2BA6NNL0 878 aaPredicted RBP14.09□□□□□ -0.15
PCDHGA8-201ENST00000398604 NUTM2EB1AL46 878 aaPredicted RBP14.09□□□□□ -0.15
PCDHGA8-201ENST00000398604 NUTM2AQ8IVF1 878 aaPredicted RBP14.09□□□□□ -0.15
PCDHGA8-201ENST00000398604 RUFY2Q8WXA3 655 aa14.09□□□□□ -0.15
PCDHGA8-201ENST00000398604 VPS37CA5D8V6 355 aaPredicted RBP14.09□□□□□ -0.15
PCDHGA8-201ENST00000398604 SYCP2Q9BX26 1530 aa14.09□□□□□ -0.15
PCDHGA8-201ENST00000398604 REC8O95072 547 aa14.09□□□□□ -0.15
PCDHGA8-201ENST00000398604 WASHC4Q2M389 1173 aa14.09□□□□□ -0.15
PCDHGA8-201ENST00000398604 BECN2A8MW95 431 aa14.08□□□□□ -0.15
PCDHGA8-201ENST00000398604 TPD52L1Q16890 204 aaPredicted RBP14.08□□□□□ -0.15
PCDHGA8-201ENST00000398604 TRIM34Q9BYJ4 488 aa14.08□□□□□ -0.15
PCDHGA8-201ENST00000398604 RPRD2Q5VT52 1461 aaKnown RBP14.08□□□□□ -0.15
PCDHGA8-201ENST00000398604 CABP1Q9NZU7 370 aa14.08□□□□□ -0.16
PCDHGA8-201ENST00000398604 TRDNQ13061 729 aa14.08□□□□□ -0.16
PCDHGA8-201ENST00000398604 CSPP1Q1MSJ5 1256 aa14.08□□□□□ -0.16
PCDHGA8-201ENST00000398604 DDX54Q8TDD1 881 aaKnown RBP14.08□□□□□ -0.16
PCDHGA8-201ENST00000398604 PNISRQ8TF01 805 aaKnown RBP14.08□□□□□ -0.16
PCDHGA8-201ENST00000398604 PTMSP20962 102 aa14.07□□□□□ -0.16
PCDHGA8-201ENST00000398604 SURF6O75683 361 aaKnown RBP14.07□□□□□ -0.16
PCDHGA8-201ENST00000398604 CCDC27Q2M243 656 aa14.07□□□□□ -0.16
PCDHGA8-201ENST00000398604 TSR2Q969E8 191 aaKnown RBP14.07□□□□□ -0.16
PCDHGA8-201ENST00000398604 PPP1R1BQ9UD71 204 aaPredicted RBP14.07□□□□□ -0.16
PCDHGA8-201ENST00000398604 UBTFL1P0CB47 393 aaPredicted RBP14.07□□□□□ -0.16
PCDHGA8-201ENST00000398604 SULT6B1Q6IMI4 303 aa14.06□□□□□ -0.16
PCDHGA8-201ENST00000398604 NFXL1Q6ZNB6 911 aa14.06□□□□□ -0.16
PCDHGA8-201ENST00000398604 C1orf115Q9H7X2 142 aa14.06□□□□□ -0.16
PCDHGA8-201ENST00000398604 EXOSC9Q06265 439 aaKnown RBP14.06□□□□□ -0.16
PCDHGA8-201ENST00000398604 RBM33Q96EV2 1170 aaKnown RBP14.06□□□□□ -0.16
PCDHGA8-201ENST00000398604 TRAPPC8Q9Y2L5 1435 aa14.05□□□□□ -0.16
PCDHGA8-201ENST00000398604 LRRFIP1Q32MZ4 808 aaKnown RBP14.05□□□□□ -0.16
PCDHGA8-201ENST00000398604 CCAR2Q8N163 923 aaKnown RBP14.05□□□□□ -0.16
PCDHGA8-201ENST00000398604 GCC2Q8IWJ2 1684 aa14.05□□□□□ -0.16
PCDHGA8-201ENST00000398604 CEP89Q96ST8 783 aa14.05□□□□□ -0.16
PCDHGA8-201ENST00000398604 CTDP1Q9Y5B0 961 aaPredicted RBP14.04□□□□□ -0.16
PCDHGA8-201ENST00000398604 DNMT1P26358 1616 aaKnown RBP14.04□□□□□ -0.16
PCDHGA8-201ENST00000398604 GOLGA6L19H0YKK7 550 aa14.04□□□□□ -0.16
PCDHGA8-201ENST00000398604 AMOTL1Q8IY63 956 aa14.04□□□□□ -0.16
PCDHGA8-201ENST00000398604 TRIM29Q14134 588 aa14.03□□□□□ -0.16
PCDHGA8-201ENST00000398604 TPM3P06753 285 aa14.03□□□□□ -0.16
PCDHGA8-201ENST00000398604 BICD2Q8TD16 824 aa14.03□□□□□ -0.16
PCDHGA8-201ENST00000398604 ATP2B1P20020 1258 aa14.03□□□□□ -0.16
PCDHGA8-201ENST00000398604 ATP6V1DQ9Y5K8 247 aa14.03□□□□□ -0.16
PCDHGA8-201ENST00000398604 CFAP74Q9C0B2 1584 aa14.02□□□□□ -0.16
PCDHGA8-201ENST00000398604 BRD4O60885 1362 aaPredicted RBP14.02□□□□□ -0.16
PCDHGA8-201ENST00000398604 PPP2R1AP30153 589 aa14.02□□□□□ -0.17
PCDHGA8-201ENST00000398604 ZC3H6P61129 1189 aaKnown RBP14.02□□□□□ -0.17
PCDHGA8-201ENST00000398604 TCEAL9Q9UHQ7 104 aa14.02□□□□□ -0.17
PCDHGA8-201ENST00000398604 GPRASP1Q5JY77 1395 aa14.01□□□□□ -0.17
PCDHGA8-201ENST00000398604 A0A0U1RQG5 324 aaPredicted RBP14.01□□□□□ -0.17
PCDHGA8-201ENST00000398604 CDK19Q9BWU1 502 aa14.01□□□□□ -0.17
PCDHGA8-201ENST00000398604 PZPP20742 1482 aa14.01□□□□□ -0.17
PCDHGA8-201ENST00000398604 RNF20Q5VTR2 975 aa14.01□□□□□ -0.17
PCDHGA8-201ENST00000398604 TOM1L2Q6ZVM7 507 aa14.01□□□□□ -0.17
PCDHGA8-201ENST00000398604 CLASRPQ8N2M8 674 aaKnown RBP14.01□□□□□ -0.17
PCDHGA8-201ENST00000398604 RRS1Q15050 365 aaKnown RBP14□□□□□ -0.17
PCDHGA8-201ENST00000398604 RALYLQ86SE5 291 aaKnown RBP14□□□□□ -0.17
PCDHGA8-201ENST00000398604 PHF14O94880 888 aa14□□□□□ -0.17
PCDHGA8-201ENST00000398604 PIP4K2BP78356 416 aa14□□□□□ -0.17
PCDHGA8-201ENST00000398604 BCAR3O75815 825 aa14□□□□□ -0.17
PCDHGA8-201ENST00000398604 SLC4A2P04920 1241 aa14□□□□□ -0.17
PCDHGA8-201ENST00000398604 TWISTNBQ3B726 338 aaPredicted RBP13.99□□□□□ -0.17
PCDHGA8-201ENST00000398604 HDGFL1Q5TGJ6 251 aa13.99□□□□□ -0.17
PCDHGA8-201ENST00000398604 SMC3Q9UQE7 1217 aa13.99□□□□□ -0.17
PCDHGA8-201ENST00000398604 GSE1Q14687 1217 aa13.99□□□□□ -0.17
PCDHGA8-201ENST00000398604 STK11IPQ8N1F8 1099 aa13.99□□□□□ -0.17
PCDHGA8-201ENST00000398604 DNAJC2Q99543 621 aaKnown RBP13.99□□□□□ -0.17
PCDHGA8-201ENST00000398604 DDX11L8A8MPP1 907 aa13.99□□□□□ -0.17
PCDHGA8-201ENST00000398604 FSD1Q9BTV5 496 aa13.99□□□□□ -0.17
PCDHGA8-201ENST00000398604 C22orf23Q9BZE7 217 aa13.99□□□□□ -0.17
PCDHGA8-201ENST00000398604 PRDM11Q9NQV5 511 aa13.99□□□□□ -0.17
PCDHGA8-201ENST00000398604 TSR1Q2NL82 804 aaKnown RBP13.98□□□□□ -0.17
PCDHGA8-201ENST00000398604 HSP90AB4PQ58FF6 505 aa13.98□□□□□ -0.17
PCDHGA8-201ENST00000398604 PCMTD1Q96MG8 357 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA8-201ENST00000398604 SIL1Q9H173 461 aa13.98□□□□□ -0.17
PCDHGA8-201ENST00000398604 ERC2O15083 957 aa13.98□□□□□ -0.17
PCDHGA8-201ENST00000398604 ZNF530Q6P9A1 599 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA8-201ENST00000398604 ATP10AO60312 1499 aa13.98□□□□□ -0.17
PCDHGA8-201ENST00000398604 ERICH2A1L162 156 aa13.98□□□□□ -0.17
PCDHGA8-201ENST00000398604 PLEKHO1Q53GL0 409 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA8-201ENST00000398604 INTS3Q68E01 1043 aaKnown RBP13.98□□□□□ -0.17
PCDHGA8-201ENST00000398604 ZNF592Q92610 1267 aa13.98□□□□□ -0.17
PCDHGA8-201ENST00000398604 ADGRL2O95490 1459 aa13.98□□□□□ -0.17
PCDHGA8-201ENST00000398604 TNRQ92752 1358 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms